RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 TSPY4P0CV99 314 aa14.16□□□□□ -0.14
NDE1-207ENST00000573203 TSPY10P0CW01 314 aa14.16□□□□□ -0.14
NDE1-207ENST00000573203 CEBPAP49715 358 aaPredicted RBP14.16□□□□□ -0.14
NDE1-207ENST00000573203 C3P01024 1663 aa14.14□□□□□ -0.15
NDE1-207ENST00000573203 LMTK3Q96Q04 1460 aa14.14□□□□□ -0.15
NDE1-207ENST00000573203 CNTLNQ9NXG0 1405 aa14.14□□□□□ -0.15
NDE1-207ENST00000573203 DHX29Q7Z478 1369 aaKnown RBP14.12□□□□□ -0.15
NDE1-207ENST00000573203 PREX1Q8TCU6 1659 aa14.12□□□□□ -0.15
NDE1-207ENST00000573203 GGT6Q6P531 493 aa14.12□□□□□ -0.15
NDE1-207ENST00000573203 PTPN23Q9H3S7 1636 aa14.12□□□□□ -0.15
NDE1-207ENST00000573203 MROH2AA6NES4 1674 aa14.11□□□□□ -0.15
NDE1-207ENST00000573203 SETD1BQ9UPS6 1966 aaKnown RBP14.11□□□□□ -0.15
NDE1-207ENST00000573203 CLTCQ00610 1675 aaKnown RBP14.1□□□□□ -0.15
NDE1-207ENST00000573203 MAST1Q9Y2H9 1570 aa14.1□□□□□ -0.15
NDE1-207ENST00000573203 HSPA2P54652 639 aa14.09□□□□□ -0.15
NDE1-207ENST00000573203 FGD6Q6ZV73 1430 aa14.08□□□□□ -0.15
NDE1-207ENST00000573203 KIF3BO15066 747 aa14.08□□□□□ -0.16
NDE1-207ENST00000573203 UHRF1BP1Q6BDS2 1440 aa14.07□□□□□ -0.16
NDE1-207ENST00000573203 ZMYM3Q14202 1370 aa14.07□□□□□ -0.16
NDE1-207ENST00000573203 SPINK5Q9NQ38 1064 aaPredicted RBP14.06□□□□□ -0.16
NDE1-207ENST00000573203 CROCC2H7BZ55 1655 aa14.06□□□□□ -0.16
NDE1-207ENST00000573203 TCOF1Q13428 1488 aaKnown RBP14.06□□□□□ -0.16
NDE1-207ENST00000573203 CAPN15O75808 1086 aa14.05□□□□□ -0.16
NDE1-207ENST00000573203 DNMT1P26358 1616 aaKnown RBP14.04□□□□□ -0.16
NDE1-207ENST00000573203 ABCC5O15440 1437 aa14.04□□□□□ -0.16
NDE1-207ENST00000573203 ZBTB22O15209 634 aa14.03□□□□□ -0.16
NDE1-207ENST00000573203 DAPK1P53355 1430 aa14.03□□□□□ -0.16
NDE1-207ENST00000573203 NPATQ14207 1427 aa14.03□□□□□ -0.16
NDE1-207ENST00000573203 SHANK2Q9UPX8 1470 aa14.03□□□□□ -0.16
NDE1-207ENST00000573203 EIF2AK4Q9P2K8 1649 aaKnown RBP14.01□□□□□ -0.17
NDE1-207ENST00000573203 KDM5DQ9BY66 1539 aa14.01□□□□□ -0.17
NDE1-207ENST00000573203 DUOX2Q9NRD8 1548 aa14.01□□□□□ -0.17
NDE1-207ENST00000573203 FAM135AQ9P2D6 1515 aa14.01□□□□□ -0.17
NDE1-207ENST00000573203 WASHC2CQ9Y4E1 1318 aa14.01□□□□□ -0.17
NDE1-207ENST00000573203 FAM50AQ14320 339 aaKnown RBP14.01□□□□□ -0.17
NDE1-207ENST00000573203 KIF15Q9NS87 1388 aa14□□□□□ -0.17
NDE1-207ENST00000573203 ZNF219Q9P2Y4 722 aaPredicted RBP14□□□□□ -0.17
NDE1-207ENST00000573203 RNF17Q9BXT8 1623 aaKnown RBP14□□□□□ -0.17
NDE1-207ENST00000573203 PTPRKQ15262 1439 aa13.99□□□□□ -0.17
NDE1-207ENST00000573203 RRP7BPQ9NSQ0 103 aa13.99□□□□□ -0.17
NDE1-207ENST00000573203 CHIC2Q9UKJ5 165 aa13.99□□□□□ -0.17
NDE1-207ENST00000573203 MYO3AQ8NEV4 1616 aa13.97□□□□□ -0.17
NDE1-207ENST00000573203 ANKRD30AQ9BXX3 1397 aa13.97□□□□□ -0.17
NDE1-207ENST00000573203 PPARGC1BQ86YN6 1023 aaKnown RBP13.97□□□□□ -0.17
NDE1-207ENST00000573203 STRCQ7RTU9 1775 aa13.96□□□□□ -0.17
NDE1-207ENST00000573203 ZC3H13Q5T200 1668 aaKnown RBP13.96□□□□□ -0.17
NDE1-207ENST00000573203 ERBINQ96RT1 1412 aa13.96□□□□□ -0.18
NDE1-207ENST00000573203 ZNF142P52746 1687 aaPredicted RBP13.95□□□□□ -0.18
NDE1-207ENST00000573203 PZPP20742 1482 aa13.95□□□□□ -0.18
NDE1-207ENST00000573203 ABCC3O15438 1527 aa13.95□□□□□ -0.18
NDE1-207ENST00000573203 MROH1Q8NDA8 1641 aa13.94□□□□□ -0.18
NDE1-207ENST00000573203 CEP152O94986 1710 aa13.94□□□□□ -0.18
NDE1-207ENST00000573203 FBXO31Q5XUX0 539 aaPredicted RBP13.94□□□□□ -0.18
NDE1-207ENST00000573203 CEP170BQ9Y4F5 1589 aaPredicted RBP13.93□□□□□ -0.18
NDE1-207ENST00000573203 NCOA1Q15788 1441 aa13.93□□□□□ -0.18
NDE1-207ENST00000573203 TNRQ92752 1358 aa13.93□□□□□ -0.18
NDE1-207ENST00000573203 CAMSAP1Q5T5Y3 1602 aa13.93□□□□□ -0.18
NDE1-207ENST00000573203 ADGRL2O95490 1459 aa13.93□□□□□ -0.18
NDE1-207ENST00000573203 DSG3P32926 999 aa13.92□□□□□ -0.18
NDE1-207ENST00000573203 PRDM15P57071 1507 aaPredicted RBP13.91□□□□□ -0.18
NDE1-207ENST00000573203 CFAP65Q6ZU64 1925 aaKnown RBP13.91□□□□□ -0.18
NDE1-207ENST00000573203 DEPDC5O75140 1603 aa13.9□□□□□ -0.18
NDE1-207ENST00000573203 KANK1Q14678 1352 aa13.9□□□□□ -0.18
NDE1-207ENST00000573203 A2ML1A8K2U0 1454 aa13.9□□□□□ -0.18
NDE1-207ENST00000573203 ILDR1Q86SU0 546 aaPredicted RBP13.88□□□□□ -0.19
NDE1-207ENST00000573203 PTPRTO14522 1441 aa13.88□□□□□ -0.19
NDE1-207ENST00000573203 PLA2R1Q13018 1463 aa13.87□□□□□ -0.19
NDE1-207ENST00000573203 SPATA31D1Q6ZQQ2 1576 aa13.87□□□□□ -0.19
NDE1-207ENST00000573203 NCKAP5LQ9HCH0 1330 aa13.87□□□□□ -0.19
NDE1-207ENST00000573203 ERVK-7P63135 1459 aa13.87□□□□□ -0.19
NDE1-207ENST00000573203 NLRP1Q9C000 1473 aa13.87□□□□□ -0.19
NDE1-207ENST00000573203 ATXN8OSP0DMR3 200 aa13.86□□□□□ -0.19
NDE1-207ENST00000573203 ITGAEP38570 1179 aa13.86□□□□□ -0.19
NDE1-207ENST00000573203 ANKRD50Q9ULJ7 1429 aa13.86□□□□□ -0.19
NDE1-207ENST00000573203 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.85□□□□□ -0.19
NDE1-207ENST00000573203 PKD2Q13563 968 aa13.85□□□□□ -0.19
NDE1-207ENST00000573203 ARHGAP31Q2M1Z3 1444 aa13.84□□□□□ -0.19
NDE1-207ENST00000573203 ROCK1Q13464 1354 aa13.83□□□□□ -0.19
NDE1-207ENST00000573203 VWDEQ8N2E2 1590 aa13.83□□□□□ -0.19
NDE1-207ENST00000573203 UGGT1Q9NYU2 1555 aa13.83□□□□□ -0.19
NDE1-207ENST00000573203 THEMISQ8N1K5 641 aaPredicted RBP13.83□□□□□ -0.2
NDE1-207ENST00000573203 LMTK2Q8IWU2 1503 aa13.83□□□□□ -0.2
NDE1-207ENST00000573203 POLR1AO95602 1720 aaPredicted RBP13.82□□□□□ -0.2
NDE1-207ENST00000573203 CERKQ8TCT0 537 aa13.82□□□□□ -0.2
NDE1-207ENST00000573203 FBXO41Q8TF61 875 aa13.82□□□□□ -0.2
NDE1-207ENST00000573203 RRBP1Q9P2E9 1410 aaKnown RBP13.81□□□□□ -0.2
NDE1-207ENST00000573203 EFCAB6Q5THR3 1501 aa13.8□□□□□ -0.2
NDE1-207ENST00000573203 ANKLE2Q86XL3 938 aa13.79□□□□□ -0.2
NDE1-207ENST00000573203 UNC13BO14795 1591 aa13.79□□□□□ -0.2
NDE1-207ENST00000573203 UBR1Q8IWV7 1749 aa13.78□□□□□ -0.2
NDE1-207ENST00000573203 TET3O43151 1660 aa13.77□□□□□ -0.21
NDE1-207ENST00000573203 NEURL4Q96JN8 1562 aa13.77□□□□□ -0.21
NDE1-207ENST00000573203 GCC2Q8IWJ2 1684 aa13.76□□□□□ -0.21
NDE1-207ENST00000573203 PIK3C2BO00750 1634 aa13.75□□□□□ -0.21
NDE1-207ENST00000573203 STAG3Q9UJ98 1225 aa13.75□□□□□ -0.21
NDE1-207ENST00000573203 LTBP4Q8N2S1 1624 aa13.75□□□□□ -0.21
NDE1-207ENST00000573203 SYNMO15061 1565 aa13.75□□□□□ -0.21
NDE1-207ENST00000573203 RPRD2Q5VT52 1461 aaKnown RBP13.74□□□□□ -0.21
NDE1-207ENST00000573203 ZNF335Q9H4Z2 1342 aaPredicted RBP13.74□□□□□ -0.21
NDE1-207ENST00000573203 IQGAP3Q86VI3 1631 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms