RNA–Protein interactions for RNA: ENST00000572686.1

SPOP-221, Transcript of speckle type BTB/POZ protein, humanhuman

Gene SPOP, Length 2,135 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-221ENST00000572686 HRCP23327 699 aa11.66□□□□□ -0.54
SPOP-221ENST00000572686 TRIM26Q12899 539 aaPredicted RBP11.65□□□□□ -0.55
SPOP-221ENST00000572686 NCOA1Q15788 1441 aa11.64□□□□□ -0.55
SPOP-221ENST00000572686 CAMSAP1Q5T5Y3 1602 aa11.63□□□□□ -0.55
SPOP-221ENST00000572686 GGT6Q6P531 493 aa11.63□□□□□ -0.55
SPOP-221ENST00000572686 RTEL1-TNFRSF6BF6WH68 1400 aa11.62□□□□□ -0.55
SPOP-221ENST00000572686 U3KPZ7 1027 aaPredicted RBP11.62□□□□□ -0.55
SPOP-221ENST00000572686 PTPRKQ15262 1439 aa11.62□□□□□ -0.55
SPOP-221ENST00000572686 ZNF142P52746 1687 aaPredicted RBP11.61□□□□□ -0.55
SPOP-221ENST00000572686 LTBP4Q8N2S1 1624 aa11.61□□□□□ -0.55
SPOP-221ENST00000572686 MYO3AQ8NEV4 1616 aa11.61□□□□□ -0.55
SPOP-221ENST00000572686 NCOA2Q15596 1464 aa11.61□□□□□ -0.55
SPOP-221ENST00000572686 DHX29Q7Z478 1369 aaKnown RBP11.6□□□□□ -0.55
SPOP-221ENST00000572686 CAMSAP2Q08AD1 1489 aa11.59□□□□□ -0.55
SPOP-221ENST00000572686 CCDC141Q6ZP82 1450 aa11.59□□□□□ -0.55
SPOP-221ENST00000572686 CEP170BQ9Y4F5 1589 aaPredicted RBP11.58□□□□□ -0.55
SPOP-221ENST00000572686 NCKAP5LQ9HCH0 1330 aa11.58□□□□□ -0.56
SPOP-221ENST00000572686 PLA2R1Q13018 1463 aa11.57□□□□□ -0.56
SPOP-221ENST00000572686 RSPH4AQ5TD94 716 aa11.56□□□□□ -0.56
SPOP-221ENST00000572686 ARHGEF5Q12774 1597 aa11.56□□□□□ -0.56
SPOP-221ENST00000572686 KIF3BO15066 747 aa11.56□□□□□ -0.56
SPOP-221ENST00000572686 TCOF1Q13428 1488 aaKnown RBP11.56□□□□□ -0.56
SPOP-221ENST00000572686 IQSEC2Q5JU85 1478 aa11.56□□□□□ -0.56
SPOP-221ENST00000572686 VPS8Q8N3P4 1428 aa11.55□□□□□ -0.56
SPOP-221ENST00000572686 LRRC9Q6ZRR7 1453 aa11.55□□□□□ -0.56
SPOP-221ENST00000572686 PKD2Q13563 968 aa11.54□□□□□ -0.56
SPOP-221ENST00000572686 DNMT1P26358 1616 aaKnown RBP11.54□□□□□ -0.56
SPOP-221ENST00000572686 A2ML1A8K2U0 1454 aa11.54□□□□□ -0.56
SPOP-221ENST00000572686 KDM5DQ9BY66 1539 aa11.53□□□□□ -0.56
SPOP-221ENST00000572686 FAM135AQ9P2D6 1515 aa11.53□□□□□ -0.56
SPOP-221ENST00000572686 FBXO31Q5XUX0 539 aaPredicted RBP11.53□□□□□ -0.56
SPOP-221ENST00000572686 ZNF335Q9H4Z2 1342 aaPredicted RBP11.53□□□□□ -0.56
SPOP-221ENST00000572686 SLC4A2P04920 1241 aa11.53□□□□□ -0.56
SPOP-221ENST00000572686 PZPP20742 1482 aa11.52□□□□□ -0.57
SPOP-221ENST00000572686 TSPY4P0CV99 314 aa11.51□□□□□ -0.57
SPOP-221ENST00000572686 TSPY10P0CW01 314 aa11.51□□□□□ -0.57
SPOP-221ENST00000572686 KANK4Q5T7N3 995 aaPredicted RBP11.51□□□□□ -0.57
SPOP-221ENST00000572686 MAST1Q9Y2H9 1570 aa11.51□□□□□ -0.57
SPOP-221ENST00000572686 TNRQ92752 1358 aa11.51□□□□□ -0.57
SPOP-221ENST00000572686 MAP3K1Q13233 1512 aa11.51□□□□□ -0.57
SPOP-221ENST00000572686 WASHC2CQ9Y4E1 1318 aa11.51□□□□□ -0.57
SPOP-221ENST00000572686 POLR1AO95602 1720 aaPredicted RBP11.5□□□□□ -0.57
SPOP-221ENST00000572686 RNF17Q9BXT8 1623 aaKnown RBP11.49□□□□□ -0.57
SPOP-221ENST00000572686 NEURL4Q96JN8 1562 aa11.49□□□□□ -0.57
SPOP-221ENST00000572686 MIA2Q96PC5 1412 aa11.48□□□□□ -0.57
SPOP-221ENST00000572686 MYOM3Q5VTT5 1437 aa11.47□□□□□ -0.57
SPOP-221ENST00000572686 DISP3Q9P2K9 1392 aa11.47□□□□□ -0.57
SPOP-221ENST00000572686 EIF2AK4Q9P2K8 1649 aaKnown RBP11.47□□□□□ -0.57
SPOP-221ENST00000572686 ZC3H13Q5T200 1668 aaKnown RBP11.46□□□□□ -0.57
SPOP-221ENST00000572686 NLRP1Q9C000 1473 aa11.46□□□□□ -0.57
SPOP-221ENST00000572686 MROH1Q8NDA8 1641 aa11.46□□□□□ -0.58
SPOP-221ENST00000572686 ABCC3O15438 1527 aa11.46□□□□□ -0.58
SPOP-221ENST00000572686 UBAP1LF5GYI3 381 aa11.45□□□□□ -0.58
SPOP-221ENST00000572686 SPINK5Q9NQ38 1064 aaPredicted RBP11.45□□□□□ -0.58
SPOP-221ENST00000572686 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.45□□□□□ -0.58
SPOP-221ENST00000572686 UGGT1Q9NYU2 1555 aa11.45□□□□□ -0.58
SPOP-221ENST00000572686 ILDR2Q71H61 639 aa11.45□□□□□ -0.58
SPOP-221ENST00000572686 CFAP65Q6ZU64 1925 aaKnown RBP11.45□□□□□ -0.58
SPOP-221ENST00000572686 THEMISQ8N1K5 641 aaPredicted RBP11.44□□□□□ -0.58
SPOP-221ENST00000572686 CEP152O94986 1710 aa11.44□□□□□ -0.58
SPOP-221ENST00000572686 SPATA31D1Q6ZQQ2 1576 aa11.44□□□□□ -0.58
SPOP-221ENST00000572686 ANKLE2Q86XL3 938 aa11.44□□□□□ -0.58
SPOP-221ENST00000572686 DEPDC5O75140 1603 aa11.44□□□□□ -0.58
SPOP-221ENST00000572686 DUOX2Q9NRD8 1548 aa11.43□□□□□ -0.58
SPOP-221ENST00000572686 CROCC2H7BZ55 1655 aa11.43□□□□□ -0.58
SPOP-221ENST00000572686 MED14O60244 1454 aa11.43□□□□□ -0.58
SPOP-221ENST00000572686 SHANK2Q9UPX8 1470 aa11.43□□□□□ -0.58
SPOP-221ENST00000572686 ERVK-7P63135 1459 aa11.42□□□□□ -0.58
SPOP-221ENST00000572686 VWDEQ8N2E2 1590 aa11.42□□□□□ -0.58
SPOP-221ENST00000572686 CPS1P31327 1500 aa11.42□□□□□ -0.58
SPOP-221ENST00000572686 PTPN23Q9H3S7 1636 aa11.42□□□□□ -0.58
SPOP-221ENST00000572686 PPARGC1BQ86YN6 1023 aaKnown RBP11.41□□□□□ -0.58
SPOP-221ENST00000572686 ABCC5O15440 1437 aa11.41□□□□□ -0.58
SPOP-221ENST00000572686 NPHP4O75161 1426 aaPredicted RBP11.41□□□□□ -0.58
SPOP-221ENST00000572686 CAPN15O75808 1086 aa11.41□□□□□ -0.58
SPOP-221ENST00000572686 IQGAP1P46940 1657 aa11.4□□□□□ -0.58
SPOP-221ENST00000572686 UBR1Q8IWV7 1749 aa11.39□□□□□ -0.59
SPOP-221ENST00000572686 KIF15Q9NS87 1388 aa11.39□□□□□ -0.59
SPOP-221ENST00000572686 PRDM15P57071 1507 aaPredicted RBP11.39□□□□□ -0.59
SPOP-221ENST00000572686 STRCP1A6NGW2 1772 aa11.39□□□□□ -0.59
SPOP-221ENST00000572686 RRP7BPQ9NSQ0 103 aa11.38□□□□□ -0.59
SPOP-221ENST00000572686 DAPK1P53355 1430 aa11.38□□□□□ -0.59
SPOP-221ENST00000572686 ERBINQ96RT1 1412 aa11.38□□□□□ -0.59
SPOP-221ENST00000572686 ARHGAP31Q2M1Z3 1444 aa11.37□□□□□ -0.59
SPOP-221ENST00000572686 FGD6Q6ZV73 1430 aa11.37□□□□□ -0.59
SPOP-221ENST00000572686 APLP2Q06481 763 aa11.37□□□□□ -0.59
SPOP-221ENST00000572686 SOCS7O14512 581 aa11.36□□□□□ -0.59
SPOP-221ENST00000572686 ALKQ9UM73 1620 aa11.36□□□□□ -0.59
SPOP-221ENST00000572686 TOM1O60784 492 aa11.36□□□□□ -0.59
SPOP-221ENST00000572686 DSG3P32926 999 aa11.36□□□□□ -0.59
SPOP-221ENST00000572686 PIP4K2BP78356 416 aa11.35□□□□□ -0.59
SPOP-221ENST00000572686 HSPA1LP34931 641 aa11.35□□□□□ -0.59
SPOP-221ENST00000572686 ARHGAP23Q9P227 1491 aa11.34□□□□□ -0.59
SPOP-221ENST00000572686 SLIT1O75093 1534 aa11.34□□□□□ -0.59
SPOP-221ENST00000572686 LTKP29376 864 aa11.33□□□□□ -0.6
SPOP-221ENST00000572686 SCAF11Q99590 1463 aaKnown RBP11.33□□□□□ -0.6
SPOP-221ENST00000572686 LRRC7Q96NW7 1537 aa11.33□□□□□ -0.6
SPOP-221ENST00000572686 PIK3C2BO00750 1634 aa11.33□□□□□ -0.6
SPOP-221ENST00000572686 ZEB1P37275 1124 aaPredicted RBP11.33□□□□□ -0.6
SPOP-221ENST00000572686 CHIC2Q9UKJ5 165 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms