RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 DHX29Q7Z478 1369 aaKnown RBP29.5■■■□□ 2.31
CHRNE-202ENST00000572438 HECW2Q9P2P5 1572 aa29.46■■■□□ 2.31
CHRNE-202ENST00000572438 TRHP20396 242 aaPredicted RBP29.45■■■□□ 2.31
CHRNE-202ENST00000572438 L3MBTL2Q969R5 705 aa29.45■■■□□ 2.3
CHRNE-202ENST00000572438 EIF2AK4Q9P2K8 1649 aaKnown RBP29.45■■■□□ 2.3
CHRNE-202ENST00000572438 TEX14Q8IWB6 1497 aa29.45■■■□□ 2.3
CHRNE-202ENST00000572438 DEPDC5O75140 1603 aa29.44■■■□□ 2.3
CHRNE-202ENST00000572438 DIEXFQ68CQ4 756 aaKnown RBP29.43■■■□□ 2.3
CHRNE-202ENST00000572438 RAPGEF3O95398 923 aa29.41■■■□□ 2.3
CHRNE-202ENST00000572438 A2MP01023 1474 aa29.4■■■□□ 2.3
CHRNE-202ENST00000572438 KIF3BO15066 747 aa29.38■■■□□ 2.29
CHRNE-202ENST00000572438 RICTORQ6R327 1708 aa29.37■■■□□ 2.29
CHRNE-202ENST00000572438 PPRC1Q5VV67 1664 aaKnown RBP29.37■■■□□ 2.29
CHRNE-202ENST00000572438 TSPOAP1O95153 1857 aa29.35■■■□□ 2.29
CHRNE-202ENST00000572438 KANK1Q14678 1352 aa29.35■■■□□ 2.29
CHRNE-202ENST00000572438 ABCA6Q8N139 1617 aa29.34■■■□□ 2.29
CHRNE-202ENST00000572438 VWDEQ8N2E2 1590 aa29.34■■■□□ 2.29
CHRNE-202ENST00000572438 PRDM15P57071 1507 aaPredicted RBP29.33■■■□□ 2.29
CHRNE-202ENST00000572438 FRMPD1Q5SYB0 1578 aa29.33■■■□□ 2.29
CHRNE-202ENST00000572438 PLA2R1Q13018 1463 aa29.32■■■□□ 2.28
CHRNE-202ENST00000572438 MROH1Q8NDA8 1641 aa29.32■■■□□ 2.28
CHRNE-202ENST00000572438 ATP10AO60312 1499 aa29.31■■■□□ 2.28
CHRNE-202ENST00000572438 CCDC144AA2RUR9 1427 aa29.29■■■□□ 2.28
CHRNE-202ENST00000572438 DIP2CQ9Y2E4 1556 aa29.28■■■□□ 2.28
CHRNE-202ENST00000572438 RNF17Q9BXT8 1623 aaKnown RBP29.27■■■□□ 2.28
CHRNE-202ENST00000572438 TET3O43151 1660 aa29.26■■■□□ 2.28
CHRNE-202ENST00000572438 ZMYM4Q5VZL5 1548 aa29.26■■■□□ 2.28
CHRNE-202ENST00000572438 BCORL1Q5H9F3 1711 aa29.25■■■□□ 2.27
CHRNE-202ENST00000572438 E9PCH4 1651 aa29.24■■■□□ 2.27
CHRNE-202ENST00000572438 NBPF8Q3BBV2 869 aa29.22■■■□□ 2.27
CHRNE-202ENST00000572438 YEATS2Q9ULM3 1422 aa29.21■■■□□ 2.27
CHRNE-202ENST00000572438 LMTK2Q8IWU2 1503 aa29.19■■■□□ 2.26
CHRNE-202ENST00000572438 PTPRTO14522 1441 aa29.18■■■□□ 2.26
CHRNE-202ENST00000572438 TRPM2O94759 1503 aa29.16■■■□□ 2.26
CHRNE-202ENST00000572438 UHRF1BP1Q6BDS2 1440 aa29.15■■■□□ 2.26
CHRNE-202ENST00000572438 EFCAB6Q5THR3 1501 aa29.15■■■□□ 2.26
CHRNE-202ENST00000572438 GGT6Q6P531 493 aa29.13■■■□□ 2.25
CHRNE-202ENST00000572438 SPHKAPQ2M3C7 1700 aa29.12■■■□□ 2.25
CHRNE-202ENST00000572438 HIRIP3Q9BW71 556 aaPredicted RBP29.1■■■□□ 2.25
CHRNE-202ENST00000572438 DCAF11Q8TEB1 546 aa29.09■■■□□ 2.25
CHRNE-202ENST00000572438 CEP152O94986 1710 aa29.08■■■□□ 2.25
CHRNE-202ENST00000572438 EIF4G2P78344 907 aaKnown RBP eCLIP29.08■■■□□ 2.25
CHRNE-202ENST00000572438 COL17A1Q9UMD9 1497 aaPredicted RBP29.07■■■□□ 2.24
CHRNE-202ENST00000572438 ABCC3O15438 1527 aa29.06■■■□□ 2.24
CHRNE-202ENST00000572438 ZNF326Q5BKZ1 582 aaKnown RBP29.06■■■□□ 2.24
CHRNE-202ENST00000572438 HSPA5P11021 654 aaKnown RBP29.06■■■□□ 2.24
CHRNE-202ENST00000572438 RGL3Q3MIN7 710 aa29.04■■■□□ 2.24
CHRNE-202ENST00000572438 KDM2AQ9Y2K7 1162 aa29.04■■■□□ 2.24
CHRNE-202ENST00000572438 WASHC2CQ9Y4E1 1318 aa29.04■■■□□ 2.24
CHRNE-202ENST00000572438 SPATA31E1Q6ZUB1 1445 aa29.04■■■□□ 2.24
CHRNE-202ENST00000572438 REREQ9P2R6 1566 aa29.04■■■□□ 2.24
CHRNE-202ENST00000572438 CLTCL1P53675 1640 aa29.03■■■□□ 2.24
CHRNE-202ENST00000572438 RALGAPBQ86X10 1494 aa29.02■■■□□ 2.24
CHRNE-202ENST00000572438 NPATQ14207 1427 aa29■■■□□ 2.23
CHRNE-202ENST00000572438 PRAG1Q86YV5 1406 aa28.98■■■□□ 2.23
CHRNE-202ENST00000572438 AGLP35573 1532 aa28.98■■■□□ 2.23
CHRNE-202ENST00000572438 ZC3H13Q5T200 1668 aaKnown RBP28.97■■■□□ 2.23
CHRNE-202ENST00000572438 CAMSAP1Q5T5Y3 1602 aa28.96■■■□□ 2.23
CHRNE-202ENST00000572438 ARHGEF40Q8TER5 1519 aa28.96■■■□□ 2.23
CHRNE-202ENST00000572438 MIER1Q8N108 512 aa28.95■■■□□ 2.23
CHRNE-202ENST00000572438 NEURL4Q96JN8 1562 aa28.95■■■□□ 2.23
CHRNE-202ENST00000572438 ARHGAP31Q2M1Z3 1444 aa28.92■■■□□ 2.22
CHRNE-202ENST00000572438 CNTLNQ9NXG0 1405 aa28.92■■■□□ 2.22
CHRNE-202ENST00000572438 UGGT1Q9NYU2 1555 aa28.92■■■□□ 2.22
CHRNE-202ENST00000572438 DDX10Q13206 875 aaKnown RBP28.91■■■□□ 2.22
CHRNE-202ENST00000572438 USP47Q96K76 1375 aa28.89■■■□□ 2.22
CHRNE-202ENST00000572438 STAC3Q96MF2 364 aa28.89■■■□□ 2.22
CHRNE-202ENST00000572438 CARD11Q9BXL7 1154 aa28.87■■■□□ 2.21
CHRNE-202ENST00000572438 TRPM1Q7Z4N2 1603 aa28.87■■■□□ 2.21
CHRNE-202ENST00000572438 PPP6R1Q9UPN7 881 aa28.87■■■□□ 2.21
CHRNE-202ENST00000572438 NOS1P29475 1434 aa28.87■■■□□ 2.21
CHRNE-202ENST00000572438 ROCK2O75116 1388 aaKnown RBP28.86■■■□□ 2.21
CHRNE-202ENST00000572438 WASHC2AQ641Q2 1341 aa28.83■■■□□ 2.21
CHRNE-202ENST00000572438 KIF1BO60333 1816 aa28.83■■■□□ 2.21
CHRNE-202ENST00000572438 SIGLEC1Q9BZZ2 1709 aa28.82■■■□□ 2.2
CHRNE-202ENST00000572438 GPRASP1Q5JY77 1395 aa28.82■■■□□ 2.2
CHRNE-202ENST00000572438 ADGRB3O60242 1522 aa28.8■■■□□ 2.2
CHRNE-202ENST00000572438 MADDQ8WXG6 1647 aa28.79■■■□□ 2.2
CHRNE-202ENST00000572438 SYNMO15061 1565 aa28.78■■■□□ 2.2
CHRNE-202ENST00000572438 LAMC1P11047 1609 aa28.77■■■□□ 2.2
CHRNE-202ENST00000572438 CCDC7Q96M83 1385 aa28.76■■■□□ 2.2
CHRNE-202ENST00000572438 NBPF1Q3BBV0 1214 aa28.76■■■□□ 2.19
CHRNE-202ENST00000572438 MROH2AA6NES4 1674 aa28.76■■■□□ 2.19
CHRNE-202ENST00000572438 CFAP65Q6ZU64 1925 aaKnown RBP28.76■■■□□ 2.19
CHRNE-202ENST00000572438 PIK3C2BO00750 1634 aa28.76■■■□□ 2.19
CHRNE-202ENST00000572438 C11orf95C9JLR9 678 aaPredicted RBP28.76■■■□□ 2.19
CHRNE-202ENST00000572438 MYOM2P54296 1465 aa28.75■■■□□ 2.19
CHRNE-202ENST00000572438 CHGAP10645 457 aaKnown RBP28.71■■■□□ 2.19
CHRNE-202ENST00000572438 PREX1Q8TCU6 1659 aa28.71■■■□□ 2.19
CHRNE-202ENST00000572438 IFT172Q9UG01 1749 aa28.7■■■□□ 2.18
CHRNE-202ENST00000572438 MLECQ14165 292 aa28.7■■■□□ 2.18
CHRNE-202ENST00000572438 SLC52A1Q9NWF4 448 aa28.7■■■□□ 2.18
CHRNE-202ENST00000572438 KIF7Q2M1P5 1343 aa28.7■■■□□ 2.18
CHRNE-202ENST00000572438 POLR1AO95602 1720 aaPredicted RBP28.7■■■□□ 2.18
CHRNE-202ENST00000572438 CLTCQ00610 1675 aaKnown RBP28.69■■■□□ 2.18
CHRNE-202ENST00000572438 ST20-MTHFSA0A0A6YYL1 179 aa28.68■■■□□ 2.18
CHRNE-202ENST00000572438 RPGRIP1LQ68CZ1 1315 aa28.67■■■□□ 2.18
CHRNE-202ENST00000572438 ERVK-7P63135 1459 aa28.67■■■□□ 2.18
CHRNE-202ENST00000572438 NRXN1Q9ULB1 1477 aa28.66■■■□□ 2.18
CHRNE-202ENST00000572438 ARID4BQ4LE39 1312 aaPredicted RBP28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms