RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 KIDINS220Q9ULH0 1771 aa27.77■■■□□ 2.04
RPAIN-210ENST00000571613 HECW2Q9P2P5 1572 aa27.75■■■□□ 2.03
RPAIN-210ENST00000571613 TEX14Q8IWB6 1497 aa27.75■■■□□ 2.03
RPAIN-210ENST00000571613 L3MBTL2Q969R5 705 aa27.75■■■□□ 2.03
RPAIN-210ENST00000571613 KANK1Q14678 1352 aa27.74■■■□□ 2.03
RPAIN-210ENST00000571613 DEPDC5O75140 1603 aa27.72■■■□□ 2.03
RPAIN-210ENST00000571613 A2MP01023 1474 aa27.71■■■□□ 2.03
RPAIN-210ENST00000571613 KIF3BO15066 747 aa27.68■■■□□ 2.02
RPAIN-210ENST00000571613 ATP10AO60312 1499 aa27.67■■■□□ 2.02
RPAIN-210ENST00000571613 CCDC144AA2RUR9 1427 aa27.64■■■□□ 2.02
RPAIN-210ENST00000571613 RAPGEF3O95398 923 aa27.64■■■□□ 2.02
RPAIN-210ENST00000571613 PRDM15P57071 1507 aaPredicted RBP27.63■■■□□ 2.01
RPAIN-210ENST00000571613 VWDEQ8N2E2 1590 aa27.63■■■□□ 2.01
RPAIN-210ENST00000571613 RICTORQ6R327 1708 aa27.63■■■□□ 2.01
RPAIN-210ENST00000571613 TET3O43151 1660 aa27.59■■■□□ 2.01
RPAIN-210ENST00000571613 BCORL1Q5H9F3 1711 aa27.58■■■□□ 2.01
RPAIN-210ENST00000571613 RNF17Q9BXT8 1623 aaKnown RBP27.57■■■□□ 2
RPAIN-210ENST00000571613 ZMYM4Q5VZL5 1548 aa27.57■■■□□ 2
RPAIN-210ENST00000571613 ABCA6Q8N139 1617 aa27.57■■■□□ 2
RPAIN-210ENST00000571613 PLA2R1Q13018 1463 aa27.56■■■□□ 2
RPAIN-210ENST00000571613 PPRC1Q5VV67 1664 aaKnown RBP27.56■■■□□ 2
RPAIN-210ENST00000571613 FRMPD1Q5SYB0 1578 aa27.54■■■□□ 2
RPAIN-210ENST00000571613 LMTK2Q8IWU2 1503 aa27.54■■■□□ 2
RPAIN-210ENST00000571613 MROH1Q8NDA8 1641 aa27.54■■■□□ 2
RPAIN-210ENST00000571613 DIP2CQ9Y2E4 1556 aa27.53■■■□□ 2
RPAIN-210ENST00000571613 KIF13AQ9H1H9 1805 aa27.52■■■□□ 2
RPAIN-210ENST00000571613 TSPOAP1O95153 1857 aa27.52■■■□□ 2
RPAIN-210ENST00000571613 UHRF1BP1Q6BDS2 1440 aa27.52■■■□□ 2
RPAIN-210ENST00000571613 PTPRTO14522 1441 aa27.51■■□□□ 1.99
RPAIN-210ENST00000571613 E9PCH4 1651 aa27.5■■□□□ 1.99
RPAIN-210ENST00000571613 EIF4G2P78344 907 aaKnown RBP eCLIP27.49■■□□□ 1.99
RPAIN-210ENST00000571613 TRPM2O94759 1503 aa27.48■■□□□ 1.99
RPAIN-210ENST00000571613 NBPF8Q3BBV2 869 aa27.48■■□□□ 1.99
RPAIN-210ENST00000571613 EFCAB6Q5THR3 1501 aa27.45■■□□□ 1.98
RPAIN-210ENST00000571613 SPHKAPQ2M3C7 1700 aa27.43■■□□□ 1.98
RPAIN-210ENST00000571613 YEATS2Q9ULM3 1422 aa27.43■■□□□ 1.98
RPAIN-210ENST00000571613 STAC3Q96MF2 364 aa27.43■■□□□ 1.98
RPAIN-210ENST00000571613 GGT6Q6P531 493 aa27.42■■□□□ 1.98
RPAIN-210ENST00000571613 DCAF11Q8TEB1 546 aa27.41■■□□□ 1.98
RPAIN-210ENST00000571613 REREQ9P2R6 1566 aa27.4■■□□□ 1.98
RPAIN-210ENST00000571613 WASHC2CQ9Y4E1 1318 aa27.39■■□□□ 1.97
RPAIN-210ENST00000571613 HSPA5P11021 654 aaKnown RBP27.38■■□□□ 1.97
RPAIN-210ENST00000571613 RALGAPBQ86X10 1494 aa27.37■■□□□ 1.97
RPAIN-210ENST00000571613 NEURL4Q96JN8 1562 aa27.37■■□□□ 1.97
RPAIN-210ENST00000571613 ABCC3O15438 1527 aa27.35■■□□□ 1.97
RPAIN-210ENST00000571613 SPATA31E1Q6ZUB1 1445 aa27.35■■□□□ 1.97
RPAIN-210ENST00000571613 CEP152O94986 1710 aa27.34■■□□□ 1.97
RPAIN-210ENST00000571613 RGL3Q3MIN7 710 aa27.34■■□□□ 1.97
RPAIN-210ENST00000571613 ZNF326Q5BKZ1 582 aaKnown RBP27.34■■□□□ 1.97
RPAIN-210ENST00000571613 PPP6R1Q9UPN7 881 aa27.34■■□□□ 1.97
RPAIN-210ENST00000571613 ZC3H13Q5T200 1668 aaKnown RBP27.34■■□□□ 1.97
RPAIN-210ENST00000571613 KDM2AQ9Y2K7 1162 aa27.33■■□□□ 1.97
RPAIN-210ENST00000571613 AGLP35573 1532 aa27.33■■□□□ 1.97
RPAIN-210ENST00000571613 HIRIP3Q9BW71 556 aaPredicted RBP27.31■■□□□ 1.96
RPAIN-210ENST00000571613 PRAG1Q86YV5 1406 aa27.31■■□□□ 1.96
RPAIN-210ENST00000571613 ARHGAP31Q2M1Z3 1444 aa27.3■■□□□ 1.96
RPAIN-210ENST00000571613 CLTCL1P53675 1640 aa27.3■■□□□ 1.96
RPAIN-210ENST00000571613 NPATQ14207 1427 aa27.3■■□□□ 1.96
RPAIN-210ENST00000571613 CNTLNQ9NXG0 1405 aa27.3■■□□□ 1.96
RPAIN-210ENST00000571613 COL17A1Q9UMD9 1497 aaPredicted RBP27.27■■□□□ 1.96
RPAIN-210ENST00000571613 MIER1Q8N108 512 aa27.26■■□□□ 1.95
RPAIN-210ENST00000571613 CAMSAP1Q5T5Y3 1602 aa27.26■■□□□ 1.95
RPAIN-210ENST00000571613 ARHGEF40Q8TER5 1519 aa27.25■■□□□ 1.95
RPAIN-210ENST00000571613 DDX10Q13206 875 aaKnown RBP27.24■■□□□ 1.95
RPAIN-210ENST00000571613 CARD11Q9BXL7 1154 aa27.24■■□□□ 1.95
RPAIN-210ENST00000571613 USP47Q96K76 1375 aa27.24■■□□□ 1.95
RPAIN-210ENST00000571613 ROCK2O75116 1388 aaKnown RBP27.22■■□□□ 1.95
RPAIN-210ENST00000571613 NOS1P29475 1434 aa27.2■■□□□ 1.95
RPAIN-210ENST00000571613 KIF1BO60333 1816 aa27.2■■□□□ 1.94
RPAIN-210ENST00000571613 GPRASP1Q5JY77 1395 aa27.2■■□□□ 1.94
RPAIN-210ENST00000571613 TRPM1Q7Z4N2 1603 aa27.19■■□□□ 1.94
RPAIN-210ENST00000571613 LAMC1P11047 1609 aa27.16■■□□□ 1.94
RPAIN-210ENST00000571613 ARID4BQ4LE39 1312 aaPredicted RBP27.16■■□□□ 1.94
RPAIN-210ENST00000571613 DNAJC5Q9H3Z4 198 aa27.16■■□□□ 1.94
RPAIN-210ENST00000571613 WASHC2AQ641Q2 1341 aa27.15■■□□□ 1.94
RPAIN-210ENST00000571613 SLC52A1Q9NWF4 448 aa27.13■■□□□ 1.93
RPAIN-210ENST00000571613 CCDC7Q96M83 1385 aa27.13■■□□□ 1.93
RPAIN-210ENST00000571613 MYOM2P54296 1465 aa27.12■■□□□ 1.93
RPAIN-210ENST00000571613 UGGT1Q9NYU2 1555 aa27.12■■□□□ 1.93
RPAIN-210ENST00000571613 ADGRB3O60242 1522 aa27.12■■□□□ 1.93
RPAIN-210ENST00000571613 RPGRIP1LQ68CZ1 1315 aa27.12■■□□□ 1.93
RPAIN-210ENST00000571613 TRHP20396 242 aaPredicted RBP27.11■■□□□ 1.93
RPAIN-210ENST00000571613 MADDQ8WXG6 1647 aa27.1■■□□□ 1.93
RPAIN-210ENST00000571613 POLR1AO95602 1720 aaPredicted RBP27.08■■□□□ 1.93
RPAIN-210ENST00000571613 PIK3C2BO00750 1634 aa27.07■■□□□ 1.92
RPAIN-210ENST00000571613 NBPF1Q3BBV0 1214 aa27.05■■□□□ 1.92
RPAIN-210ENST00000571613 SIGLEC1Q9BZZ2 1709 aa27.05■■□□□ 1.92
RPAIN-210ENST00000571613 SYNMO15061 1565 aa27.05■■□□□ 1.92
RPAIN-210ENST00000571613 ANP32CO43423 234 aa27.05■■□□□ 1.92
RPAIN-210ENST00000571613 CFAP65Q6ZU64 1925 aaKnown RBP27.04■■□□□ 1.92
RPAIN-210ENST00000571613 KIAA1210Q9ULL0 1709 aa27.04■■□□□ 1.92
RPAIN-210ENST00000571613 CHGAP10645 457 aaKnown RBP27.04■■□□□ 1.92
RPAIN-210ENST00000571613 KIF7Q2M1P5 1343 aa27.04■■□□□ 1.92
RPAIN-210ENST00000571613 ESF1Q9H501 851 aaKnown RBP27.03■■□□□ 1.92
RPAIN-210ENST00000571613 PREX1Q8TCU6 1659 aa27.02■■□□□ 1.92
RPAIN-210ENST00000571613 ST20-MTHFSA0A0A6YYL1 179 aa27.02■■□□□ 1.92
RPAIN-210ENST00000571613 C11orf95C9JLR9 678 aaPredicted RBP27.02■■□□□ 1.92
RPAIN-210ENST00000571613 IFT172Q9UG01 1749 aa27.02■■□□□ 1.92
RPAIN-210ENST00000571613 NRXN1Q9ULB1 1477 aa27■■□□□ 1.91
RPAIN-210ENST00000571613 MROH2AA6NES4 1674 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms