RNA–Protein interactions for RNA: ENST00000571562.1

NPLOC4-205, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-205ENST00000571562 FBXW7Q969H0 707 aa8.82□□□□□ -1
NPLOC4-205ENST00000571562 ADAM33Q9BZ11 813 aa8.82□□□□□ -1
NPLOC4-205ENST00000571562 LHX6Q9UPM6 363 aa8.82□□□□□ -1
NPLOC4-205ENST00000571562 ZDHHC16Q969W1 377 aa8.81□□□□□ -1
NPLOC4-205ENST00000571562 MINK1Q8N4C8 1332 aaPredicted RBP8.8□□□□□ -1
NPLOC4-205ENST00000571562 PDE4DQ08499 809 aa8.8□□□□□ -1
NPLOC4-205ENST00000571562 IRF6O14896 467 aa8.79□□□□□ -1
NPLOC4-205ENST00000571562 LHX8Q68G74 356 aa8.78□□□□□ -1
NPLOC4-205ENST00000571562 SNPHO15079 494 aa8.77□□□□□ -1.01
NPLOC4-205ENST00000571562 HOXB1P14653 301 aaPredicted RBP8.77□□□□□ -1.01
NPLOC4-205ENST00000571562 TMEM132AQ24JP5 1023 aa8.77□□□□□ -1.01
NPLOC4-205ENST00000571562 C6orf132Q5T0Z8 1188 aa8.77□□□□□ -1.01
NPLOC4-205ENST00000571562 KDM4CQ9H3R0 1056 aa8.77□□□□□ -1.01
NPLOC4-205ENST00000571562 FAM161AQ3B820 660 aa8.76□□□□□ -1.01
NPLOC4-205ENST00000571562 PADI6Q6TGC4 694 aa8.76□□□□□ -1.01
NPLOC4-205ENST00000571562 PARP9Q8IXQ6 854 aa8.76□□□□□ -1.01
NPLOC4-205ENST00000571562 AMHR2Q16671 573 aa8.75□□□□□ -1.01
NPLOC4-205ENST00000571562 PPP4R3BQ5MIZ7 849 aa8.75□□□□□ -1.01
NPLOC4-205ENST00000571562 COL9A1P20849 921 aa8.73□□□□□ -1.01
NPLOC4-205ENST00000571562 TTLL12Q14166 644 aaPredicted RBP8.73□□□□□ -1.01
NPLOC4-205ENST00000571562 NLRP7Q8WX94 980 aa8.72□□□□□ -1.01
NPLOC4-205ENST00000571562 PHOX2BQ99453 314 aa8.72□□□□□ -1.01
NPLOC4-205ENST00000571562 BCL2L12Q9HB09 334 aa8.72□□□□□ -1.01
NPLOC4-205ENST00000571562 PSDA5PKW4 1024 aaPredicted RBP8.71□□□□□ -1.02
NPLOC4-205ENST00000571562 CERKQ8TCT0 537 aa8.7□□□□□ -1.02
NPLOC4-205ENST00000571562 CDCA7LQ96GN5 454 aa8.69□□□□□ -1.02
NPLOC4-205ENST00000571562 REPIN1Q9BWE0 567 aaKnown RBP8.69□□□□□ -1.02
NPLOC4-205ENST00000571562 RBM27Q9P2N5 1060 aaKnown RBP8.69□□□□□ -1.02
NPLOC4-205ENST00000571562 FAM198AQ9UFP1 575 aa8.69□□□□□ -1.02
NPLOC4-205ENST00000571562 ADGRG1Q9Y653 693 aa8.69□□□□□ -1.02
NPLOC4-205ENST00000571562 PPP1R3GB7ZBB8 358 aa8.68□□□□□ -1.02
NPLOC4-205ENST00000571562 PRSS12P56730 875 aa8.68□□□□□ -1.02
NPLOC4-205ENST00000571562 GIGYF2Q6Y7W6 1299 aaKnown RBP8.68□□□□□ -1.02
NPLOC4-205ENST00000571562 METTL3Q86U44 580 aaKnown RBP8.68□□□□□ -1.02
NPLOC4-205ENST00000571562 TTC13Q8NBP0 860 aa8.68□□□□□ -1.02
NPLOC4-205ENST00000571562 KCNK17Q96T54 332 aa8.68□□□□□ -1.02
NPLOC4-205ENST00000571562 FAM117AQ9C073 453 aa8.68□□□□□ -1.02
NPLOC4-205ENST00000571562 ST18O60284 1047 aa8.67□□□□□ -1.02
NPLOC4-205ENST00000571562 PTPREP23469 700 aa8.67□□□□□ -1.02
NPLOC4-205ENST00000571562 MDM2Q00987 491 aaPredicted RBP8.67□□□□□ -1.02
NPLOC4-205ENST00000571562 IL27Q8NEV9 243 aa8.67□□□□□ -1.02
NPLOC4-205ENST00000571562 MARVELD3Q96A59 401 aa8.67□□□□□ -1.02
NPLOC4-205ENST00000571562 TSKSQ9UJT2 592 aa8.66□□□□□ -1.02
NPLOC4-205ENST00000571562 C3orf80F5H4A9 247 aa8.65□□□□□ -1.02
NPLOC4-205ENST00000571562 MS4A1P11836 297 aa8.65□□□□□ -1.02
NPLOC4-205ENST00000571562 PROX2Q3B8N5 592 aa8.65□□□□□ -1.02
NPLOC4-205ENST00000571562 VARS2Q5ST30 1063 aaKnown RBP8.65□□□□□ -1.02
NPLOC4-205ENST00000571562 PXYLP1Q8TE99 480 aa8.65□□□□□ -1.02
NPLOC4-205ENST00000571562 ERBB3P21860 1342 aa8.64□□□□□ -1.03
NPLOC4-205ENST00000571562 PLEKHG3A1L390 1219 aa8.64□□□□□ -1.03
NPLOC4-205ENST00000571562 EMP3P54852 163 aa8.64□□□□□ -1.03
NPLOC4-205ENST00000571562 GTF3C3Q9Y5Q9 886 aa8.64□□□□□ -1.03
NPLOC4-205ENST00000571562 PSEN2P49810 448 aa8.63□□□□□ -1.03
NPLOC4-205ENST00000571562 TMUB1Q9BVT8 246 aa8.63□□□□□ -1.03
NPLOC4-205ENST00000571562 TRIM6-TRIM34B2RNG4 842 aa8.62□□□□□ -1.03
NPLOC4-205ENST00000571562 CLCN1P35523 988 aa8.62□□□□□ -1.03
NPLOC4-205ENST00000571562 POTEEQ6S8J3 1075 aa8.62□□□□□ -1.03
NPLOC4-205ENST00000571562 GPCPD1Q9NPB8 672 aa8.62□□□□□ -1.03
NPLOC4-205ENST00000571562 OATP04181 439 aa8.61□□□□□ -1.03
NPLOC4-205ENST00000571562 AXIN2Q9Y2T1 843 aa8.61□□□□□ -1.03
NPLOC4-205ENST00000571562 NUDT18Q6ZVK8 323 aa8.6□□□□□ -1.03
NPLOC4-205ENST00000571562 DDRGK1Q96HY6 314 aa8.6□□□□□ -1.03
NPLOC4-205ENST00000571562 FAM205CA6NFA0 338 aa8.59□□□□□ -1.03
NPLOC4-205ENST00000571562 NBPF26B4DH59 902 aa8.59□□□□□ -1.03
NPLOC4-205ENST00000571562 SMAPO00193 183 aa8.59□□□□□ -1.03
NPLOC4-205ENST00000571562 LCE2DQ5TA82 110 aaPredicted RBP8.59□□□□□ -1.03
NPLOC4-205ENST00000571562 DMRTA1Q5VZB9 504 aa8.59□□□□□ -1.03
NPLOC4-205ENST00000571562 RBM46Q8TBY0 533 aaKnown RBP8.59□□□□□ -1.03
NPLOC4-205ENST00000571562 TIMELESSQ9UNS1 1208 aa8.59□□□□□ -1.03
NPLOC4-205ENST00000571562 KCNH8Q96L42 1107 aa8.58□□□□□ -1.04
NPLOC4-205ENST00000571562 ZBED2Q9BTP6 218 aa8.58□□□□□ -1.04
NPLOC4-205ENST00000571562 FAM217BQ9NTX9 383 aaPredicted RBP8.58□□□□□ -1.04
NPLOC4-205ENST00000571562 PNMA3Q9UL41 463 aa8.58□□□□□ -1.04
NPLOC4-205ENST00000571562 POTEB3A0JP26 581 aa8.57□□□□□ -1.04
NPLOC4-205ENST00000571562 RCCD1A6NED2 376 aa8.57□□□□□ -1.04
NPLOC4-205ENST00000571562 POTEBQ6S5H4 581 aa8.57□□□□□ -1.04
NPLOC4-205ENST00000571562 FAM163AQ96GL9 167 aaPredicted RBP8.57□□□□□ -1.04
NPLOC4-205ENST00000571562 EYA1Q99502 592 aa8.57□□□□□ -1.04
NPLOC4-205ENST00000571562 TATDN2Q93075 761 aa8.56□□□□□ -1.04
NPLOC4-205ENST00000571562 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.55□□□□□ -1.04
NPLOC4-205ENST00000571562 SSTR3P32745 418 aaPredicted RBP8.55□□□□□ -1.04
NPLOC4-205ENST00000571562 HS3ST6Q96QI5 342 aa8.55□□□□□ -1.04
NPLOC4-205ENST00000571562 ARHGAP33O14559 1287 aa8.54□□□□□ -1.04
NPLOC4-205ENST00000571562 PACS2Q86VP3 889 aa8.54□□□□□ -1.04
NPLOC4-205ENST00000571562 KIAA1468Q9P260 1216 aa8.54□□□□□ -1.04
NPLOC4-205ENST00000571562 SEPT9Q9UHD8 586 aaPredicted RBP8.54□□□□□ -1.04
NPLOC4-205ENST00000571562 DNAJB2P25686 324 aa8.53□□□□□ -1.04
NPLOC4-205ENST00000571562 BEGAINQ9BUH8 593 aa8.53□□□□□ -1.04
NPLOC4-205ENST00000571562 TMEM134Q9H6X4 195 aa8.53□□□□□ -1.04
NPLOC4-205ENST00000571562 PBX2P40425 430 aa8.52□□□□□ -1.05
NPLOC4-205ENST00000571562 ZNF687Q8N1G0 1237 aa8.52□□□□□ -1.05
NPLOC4-205ENST00000571562 DAXXQ9UER7 740 aaPredicted RBP8.51□□□□□ -1.05
NPLOC4-205ENST00000571562 ONECUT3O60422 494 aaPredicted RBP8.5□□□□□ -1.05
NPLOC4-205ENST00000571562 RABGEF1Q9UJ41 708 aa8.49□□□□□ -1.05
NPLOC4-205ENST00000571562 VPS9D1Q9Y2B5 631 aa8.49□□□□□ -1.05
NPLOC4-205ENST00000571562 DDX11L8A8MPP1 907 aa8.48□□□□□ -1.05
NPLOC4-205ENST00000571562 SH3D19Q5HYK7 790 aa8.48□□□□□ -1.05
NPLOC4-205ENST00000571562 SLC4A5Q9BY07 1137 aa8.48□□□□□ -1.05
NPLOC4-205ENST00000571562 CD46P15529 392 aa8.47□□□□□ -1.05
NPLOC4-205ENST00000571562 SWT1Q5T5J6 900 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms