RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 TROQ12816 1431 aaPredicted RBP14.3□□□□□ -0.12
PCDHGA4-201ENST00000571252 ANKRD30BQ9BXX2 1392 aa14.3□□□□□ -0.12
PCDHGA4-201ENST00000571252 GRIN2AQ12879 1464 aa14.3□□□□□ -0.12
PCDHGA4-201ENST00000571252 TARBP1Q13395 1621 aaKnown RBP14.29□□□□□ -0.12
PCDHGA4-201ENST00000571252 ADAMTS12P58397 1594 aa14.29□□□□□ -0.12
PCDHGA4-201ENST00000571252 PLIN1O60240 522 aa14.28□□□□□ -0.12
PCDHGA4-201ENST00000571252 GOLGA2Q08379 1002 aa14.28□□□□□ -0.12
PCDHGA4-201ENST00000571252 ANKRD50Q9ULJ7 1429 aa14.28□□□□□ -0.12
PCDHGA4-201ENST00000571252 USP35Q9P2H5 1018 aa14.28□□□□□ -0.12
PCDHGA4-201ENST00000571252 MAPK8IP3Q9UPT6 1336 aa14.28□□□□□ -0.12
PCDHGA4-201ENST00000571252 ROCK1Q13464 1354 aa14.27□□□□□ -0.13
PCDHGA4-201ENST00000571252 NUP153P49790 1475 aaKnown RBP14.27□□□□□ -0.13
PCDHGA4-201ENST00000571252 NAP1L5Q96NT1 182 aaPredicted RBP14.26□□□□□ -0.13
PCDHGA4-201ENST00000571252 TCOF1Q13428 1488 aaKnown RBP14.26□□□□□ -0.13
PCDHGA4-201ENST00000571252 SLKQ9H2G2 1235 aaPredicted RBP14.26□□□□□ -0.13
PCDHGA4-201ENST00000571252 WDR62O43379 1518 aa14.26□□□□□ -0.13
PCDHGA4-201ENST00000571252 MS4A1P11836 297 aa14.26□□□□□ -0.13
PCDHGA4-201ENST00000571252 PTPRGP23470 1445 aa14.26□□□□□ -0.13
PCDHGA4-201ENST00000571252 NCLP19338 710 aaKnown RBP14.25□□□□□ -0.13
PCDHGA4-201ENST00000571252 U2SURPO15042 1029 aaKnown RBP14.25□□□□□ -0.13
PCDHGA4-201ENST00000571252 A0A0G2JS52 829 aa14.25□□□□□ -0.13
PCDHGA4-201ENST00000571252 MORC1Q86VD1 984 aa14.25□□□□□ -0.13
PCDHGA4-201ENST00000571252 SPRYD3Q8NCJ5 442 aa14.25□□□□□ -0.13
PCDHGA4-201ENST00000571252 PBRM1Q86U86 1689 aa14.24□□□□□ -0.13
PCDHGA4-201ENST00000571252 L1TD1Q5T7N2 865 aaKnown RBP14.24□□□□□ -0.13
PCDHGA4-201ENST00000571252 AKNAQ7Z591 1439 aa14.23□□□□□ -0.13
PCDHGA4-201ENST00000571252 CAMSAP2Q08AD1 1489 aa14.23□□□□□ -0.13
PCDHGA4-201ENST00000571252 PANK3Q9H999 370 aa14.23□□□□□ -0.13
PCDHGA4-201ENST00000571252 SLC4A3P48751 1232 aa14.22□□□□□ -0.13
PCDHGA4-201ENST00000571252 CRBNQ96SW2 442 aa14.22□□□□□ -0.13
PCDHGA4-201ENST00000571252 NCOA1Q15788 1441 aa14.22□□□□□ -0.13
PCDHGA4-201ENST00000571252 RPRD2Q5VT52 1461 aaKnown RBP14.22□□□□□ -0.13
PCDHGA4-201ENST00000571252 HSP90AB1P08238 724 aaKnown RBP14.21□□□□□ -0.13
PCDHGA4-201ENST00000571252 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.21□□□□□ -0.13
PCDHGA4-201ENST00000571252 KDM6BO15054 1643 aa14.21□□□□□ -0.13
PCDHGA4-201ENST00000571252 DISP1Q96F81 1524 aa14.21□□□□□ -0.13
PCDHGA4-201ENST00000571252 HSCBQ8IWL3 235 aa14.21□□□□□ -0.13
PCDHGA4-201ENST00000571252 CCDC146Q8IYE0 955 aa14.21□□□□□ -0.13
PCDHGA4-201ENST00000571252 KIAA1107Q9UPP5 1409 aa14.21□□□□□ -0.13
PCDHGA4-201ENST00000571252 PLEKHG5O94827 1062 aa14.2□□□□□ -0.14
PCDHGA4-201ENST00000571252 CENPQQ7L2Z9 268 aaPredicted RBP14.2□□□□□ -0.14
PCDHGA4-201ENST00000571252 SYNJ2O15056 1496 aa14.19□□□□□ -0.14
PCDHGA4-201ENST00000571252 KIAA0556O60303 1618 aa14.19□□□□□ -0.14
PCDHGA4-201ENST00000571252 C9orf84Q5VXU9 1444 aa14.19□□□□□ -0.14
PCDHGA4-201ENST00000571252 RAPGEF6Q8TEU7 1601 aa14.19□□□□□ -0.14
PCDHGA4-201ENST00000571252 GPATCH8Q9UKJ3 1502 aaKnown RBP14.18□□□□□ -0.14
PCDHGA4-201ENST00000571252 FAM161AQ3B820 660 aa14.18□□□□□ -0.14
PCDHGA4-201ENST00000571252 LRRIQ1Q96JM4 1722 aa14.18□□□□□ -0.14
PCDHGA4-201ENST00000571252 ARHGEF11O15085 1522 aa14.18□□□□□ -0.14
PCDHGA4-201ENST00000571252 HAP1P54257 671 aaPredicted RBP14.17□□□□□ -0.14
PCDHGA4-201ENST00000571252 RWDD1Q9H446 243 aaPredicted RBP14.17□□□□□ -0.14
PCDHGA4-201ENST00000571252 ZBTB7CA1YPR0 619 aa14.17□□□□□ -0.14
PCDHGA4-201ENST00000571252 PAK3O75914 559 aaPredicted RBP14.17□□□□□ -0.14
PCDHGA4-201ENST00000571252 MAGI1Q96QZ7 1491 aaPredicted RBP14.17□□□□□ -0.14
PCDHGA4-201ENST00000571252 GZF1Q9H116 711 aaPredicted RBP14.17□□□□□ -0.14
PCDHGA4-201ENST00000571252 GSE1Q14687 1217 aa14.16□□□□□ -0.14
PCDHGA4-201ENST00000571252 KANK1Q14678 1352 aa14.16□□□□□ -0.14
PCDHGA4-201ENST00000571252 CCDC144AA2RUR9 1427 aa14.16□□□□□ -0.14
PCDHGA4-201ENST00000571252 RSPH4AQ5TD94 716 aa14.16□□□□□ -0.14
PCDHGA4-201ENST00000571252 CHMP4BQ9H444 224 aaKnown RBP14.16□□□□□ -0.14
PCDHGA4-201ENST00000571252 MSH5O43196 834 aa14.15□□□□□ -0.14
PCDHGA4-201ENST00000571252 CLUAP1Q96AJ1 413 aa14.15□□□□□ -0.14
PCDHGA4-201ENST00000571252 U2AF1L5P0DN76 240 aaPredicted RBP14.15□□□□□ -0.14
PCDHGA4-201ENST00000571252 U2AF1Q01081 240 aaKnown RBP eCLIP14.15□□□□□ -0.14
PCDHGA4-201ENST00000571252 POGKQ9P215 609 aa14.15□□□□□ -0.14
PCDHGA4-201ENST00000571252 CENPJQ9HC77 1338 aaPredicted RBP14.15□□□□□ -0.14
PCDHGA4-201ENST00000571252 PMFBP1Q8TBY8 1022 aa14.15□□□□□ -0.14
PCDHGA4-201ENST00000571252 CASC1Q6TDU7 716 aa14.14□□□□□ -0.15
PCDHGA4-201ENST00000571252 EIF4G3O43432 1585 aaKnown RBP14.14□□□□□ -0.15
PCDHGA4-201ENST00000571252 PTMAP06454 111 aaKnown RBP14.13□□□□□ -0.15
PCDHGA4-201ENST00000571252 EFCAB2Q5VUJ9 269 aa14.12□□□□□ -0.15
PCDHGA4-201ENST00000571252 SAFB2Q14151 953 aaKnown RBP eCLIP14.12□□□□□ -0.15
PCDHGA4-201ENST00000571252 NBPF1Q3BBV0 1214 aa14.12□□□□□ -0.15
PCDHGA4-201ENST00000571252 OSCARQ8IYS5 282 aa14.12□□□□□ -0.15
PCDHGA4-201ENST00000571252 PNNQ9H307 717 aaKnown RBP14.11□□□□□ -0.15
PCDHGA4-201ENST00000571252 DENND4BO75064 1496 aaPredicted RBP14.11□□□□□ -0.15
PCDHGA4-201ENST00000571252 GCC2Q8IWJ2 1684 aa14.11□□□□□ -0.15
PCDHGA4-201ENST00000571252 BRD4O60885 1362 aaPredicted RBP14.11□□□□□ -0.15
PCDHGA4-201ENST00000571252 SRPK2P78362 688 aaKnown RBP14.1□□□□□ -0.15
PCDHGA4-201ENST00000571252 DNMT1P26358 1616 aaKnown RBP14.1□□□□□ -0.15
PCDHGA4-201ENST00000571252 PNISRQ8TF01 805 aaKnown RBP14.1□□□□□ -0.15
PCDHGA4-201ENST00000571252 APAF1O14727 1248 aa14.1□□□□□ -0.15
PCDHGA4-201ENST00000571252 MFAP1P55081 439 aaKnown RBP14.1□□□□□ -0.15
PCDHGA4-201ENST00000571252 ITPRIPQ8IWB1 547 aa14.1□□□□□ -0.15
PCDHGA4-201ENST00000571252 CDCA7LQ96GN5 454 aa14.1□□□□□ -0.15
PCDHGA4-201ENST00000571252 IPO8O15397 1037 aaKnown RBP14.09□□□□□ -0.15
PCDHGA4-201ENST00000571252 ATP10BO94823 1461 aa14.09□□□□□ -0.15
PCDHGA4-201ENST00000571252 PZPP20742 1482 aa14.09□□□□□ -0.15
PCDHGA4-201ENST00000571252 EIF3AQ14152 1382 aaKnown RBP14.09□□□□□ -0.15
PCDHGA4-201ENST00000571252 GOLGA6L3A6NEY3 463 aa14.08□□□□□ -0.16
PCDHGA4-201ENST00000571252 TEX14Q8IWB6 1497 aa14.07□□□□□ -0.16
PCDHGA4-201ENST00000571252 E9PSI1 815 aa14.07□□□□□ -0.16
PCDHGA4-201ENST00000571252 SMC4Q9NTJ3 1288 aa14.07□□□□□ -0.16
PCDHGA4-201ENST00000571252 COG6Q9Y2V7 657 aa14.07□□□□□ -0.16
PCDHGA4-201ENST00000571252 CGNL1Q0VF96 1302 aa14.07□□□□□ -0.16
PCDHGA4-201ENST00000571252 DNTTIP2Q5QJE6 756 aaKnown RBP14.07□□□□□ -0.16
PCDHGA4-201ENST00000571252 RRP7AQ9Y3A4 280 aaKnown RBP14.07□□□□□ -0.16
PCDHGA4-201ENST00000571252 GBP4Q96PP9 640 aa14.07□□□□□ -0.16
PCDHGA4-201ENST00000571252 SMG6Q86US8 1419 aaKnown RBP14.06□□□□□ -0.16
PCDHGA4-201ENST00000571252 LMOD2Q6P5Q4 547 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms