RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 VASPP50552 380 aaPredicted RBP5.11□□□□□ -1.59
SMG6-208ENST00000570874 RAPGEF6Q8TEU7 1601 aa5.11□□□□□ -1.59
SMG6-208ENST00000570874 NEUROD2Q15784 382 aa5.1□□□□□ -1.59
SMG6-208ENST00000570874 MAGI3Q5TCQ9 1506 aa5.1□□□□□ -1.59
SMG6-208ENST00000570874 HECW1Q76N89 1606 aa5.1□□□□□ -1.59
SMG6-208ENST00000570874 DISP1Q96F81 1524 aa5.1□□□□□ -1.59
SMG6-208ENST00000570874 BMP2KQ9NSY1 1161 aaPredicted RBP5.1□□□□□ -1.59
SMG6-208ENST00000570874 SUPT6HQ7KZ85 1726 aaKnown RBP5.09□□□□□ -1.59
SMG6-208ENST00000570874 SHROOM2Q13796 1616 aa5.09□□□□□ -1.59
SMG6-208ENST00000570874 ERCC6L2Q5T890 1561 aa5.09□□□□□ -1.59
SMG6-208ENST00000570874 FYCO1Q9BQS8 1478 aa5.09□□□□□ -1.59
SMG6-208ENST00000570874 SEC24BO95487 1268 aa5.09□□□□□ -1.59
SMG6-208ENST00000570874 RGS22Q8NE09 1264 aa5.09□□□□□ -1.59
SMG6-208ENST00000570874 MAP3K1Q13233 1512 aa5.08□□□□□ -1.6
SMG6-208ENST00000570874 CDK13Q14004 1512 aaKnown RBP5.08□□□□□ -1.6
SMG6-208ENST00000570874 KIAA0586Q9BVV6 1533 aa5.08□□□□□ -1.6
SMG6-208ENST00000570874 LRRC9Q6ZRR7 1453 aa5.08□□□□□ -1.6
SMG6-208ENST00000570874 NUP160Q12769 1436 aa5.08□□□□□ -1.6
SMG6-208ENST00000570874 CASKIN1Q8WXD9 1431 aa5.08□□□□□ -1.6
SMG6-208ENST00000570874 IFNLR1Q8IU57 520 aaPredicted RBP5.08□□□□□ -1.6
SMG6-208ENST00000570874 PKNOX2Q96KN3 472 aa5.08□□□□□ -1.6
SMG6-208ENST00000570874 C1orf115Q9H7X2 142 aa5.08□□□□□ -1.6
SMG6-208ENST00000570874 CDC42BPAQ5VT25 1732 aa5.07□□□□□ -1.6
SMG6-208ENST00000570874 ECM2O94769 699 aaPredicted RBP5.07□□□□□ -1.6
SMG6-208ENST00000570874 ATP1B4Q9UN42 357 aaPredicted RBP5.07□□□□□ -1.6
SMG6-208ENST00000570874 KIF14Q15058 1648 aa5.06□□□□□ -1.6
SMG6-208ENST00000570874 RBM25P49756 843 aaKnown RBP5.06□□□□□ -1.6
SMG6-208ENST00000570874 CHMP7Q8WUX9 453 aaPredicted RBP5.06□□□□□ -1.6
SMG6-208ENST00000570874 CLASP1Q7Z460 1538 aa5.06□□□□□ -1.6
SMG6-208ENST00000570874 FMN1Q68DA7 1419 aa5.06□□□□□ -1.6
SMG6-208ENST00000570874 ARID3CA6NKF2 412 aa5.05□□□□□ -1.6
SMG6-208ENST00000570874 CLSTN1O94985 981 aa5.05□□□□□ -1.6
SMG6-208ENST00000570874 TICAM2Q86XR7 235 aa5.05□□□□□ -1.6
SMG6-208ENST00000570874 MTMR7Q9Y216 660 aa5.05□□□□□ -1.6
SMG6-208ENST00000570874 EPRSP07814 1512 aaKnown RBP5.05□□□□□ -1.6
SMG6-208ENST00000570874 EHBP1L1Q8N3D4 1523 aa5.05□□□□□ -1.6
SMG6-208ENST00000570874 RRBP1Q9P2E9 1410 aaKnown RBP5.05□□□□□ -1.6
SMG6-208ENST00000570874 ADCY10Q96PN6 1610 aa5.05□□□□□ -1.6
SMG6-208ENST00000570874 PTPN23Q9H3S7 1636 aa5.05□□□□□ -1.6
SMG6-208ENST00000570874 PHLDB1Q86UU1 1377 aa5.04□□□□□ -1.6
SMG6-208ENST00000570874 ABCA8O94911 1581 aa5.04□□□□□ -1.6
SMG6-208ENST00000570874 CDC42BPBQ9Y5S2 1711 aa5.04□□□□□ -1.6
SMG6-208ENST00000570874 EMP3P54852 163 aa5.04□□□□□ -1.6
SMG6-208ENST00000570874 FGD1P98174 961 aa5.04□□□□□ -1.6
SMG6-208ENST00000570874 RSPH4AQ5TD94 716 aa5.04□□□□□ -1.6
SMG6-208ENST00000570874 TMCO4Q5TGY1 634 aa5.04□□□□□ -1.6
SMG6-208ENST00000570874 RNF166Q96A37 237 aaPredicted RBP5.04□□□□□ -1.6
SMG6-208ENST00000570874 PSMD1Q99460 953 aa5.04□□□□□ -1.6
SMG6-208ENST00000570874 TRPC6Q9Y210 931 aa5.04□□□□□ -1.6
SMG6-208ENST00000570874 NUP153P49790 1475 aaKnown RBP5.04□□□□□ -1.6
SMG6-208ENST00000570874 PLB1Q6P1J6 1458 aa5.04□□□□□ -1.6
SMG6-208ENST00000570874 CROCC2H7BZ55 1655 aa5.03□□□□□ -1.6
SMG6-208ENST00000570874 E9PSI1 815 aa5.03□□□□□ -1.6
SMG6-208ENST00000570874 ZEB1P37275 1124 aaPredicted RBP5.03□□□□□ -1.6
SMG6-208ENST00000570874 LMOD2Q6P5Q4 547 aa5.03□□□□□ -1.6
SMG6-208ENST00000570874 BCL11BQ9C0K0 894 aaPredicted RBP5.03□□□□□ -1.6
SMG6-208ENST00000570874 USP35Q9P2H5 1018 aa5.03□□□□□ -1.6
SMG6-208ENST00000570874 ARHGEF11O15085 1522 aa5.02□□□□□ -1.61
SMG6-208ENST00000570874 ITSN2Q9NZM3 1697 aa5.02□□□□□ -1.61
SMG6-208ENST00000570874 NCOA2Q15596 1464 aa5.02□□□□□ -1.61
SMG6-208ENST00000570874 CCDC18Q5T9S5 1454 aa5.02□□□□□ -1.61
SMG6-208ENST00000570874 POTEB3A0JP26 581 aa5.02□□□□□ -1.61
SMG6-208ENST00000570874 APBB1O00213 710 aa5.02□□□□□ -1.61
SMG6-208ENST00000570874 SNPHO15079 494 aa5.02□□□□□ -1.61
SMG6-208ENST00000570874 TIE1P35590 1138 aa5.02□□□□□ -1.61
SMG6-208ENST00000570874 POTEBQ6S5H4 581 aa5.02□□□□□ -1.61
SMG6-208ENST00000570874 HS3ST6Q96QI5 342 aa5.02□□□□□ -1.61
SMG6-208ENST00000570874 TRAIPQ9BWF2 469 aa5.02□□□□□ -1.61
SMG6-208ENST00000570874 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.02□□□□□ -1.61
SMG6-208ENST00000570874 GCC2Q8IWJ2 1684 aa5.02□□□□□ -1.61
SMG6-208ENST00000570874 ZCCHC11Q5TAX3 1644 aaKnown RBP5.01□□□□□ -1.61
SMG6-208ENST00000570874 PRG4Q92954 1404 aaPredicted RBP5.01□□□□□ -1.61
SMG6-208ENST00000570874 MFAP1P55081 439 aaKnown RBP5.01□□□□□ -1.61
SMG6-208ENST00000570874 FAM177A1Q8N128 213 aaPredicted RBP5.01□□□□□ -1.61
SMG6-208ENST00000570874 ZNF592Q92610 1267 aa5.01□□□□□ -1.61
SMG6-208ENST00000570874 JPH4Q96JJ6 628 aa5.01□□□□□ -1.61
SMG6-208ENST00000570874 ADGBQ8N7X0 1667 aa5.01□□□□□ -1.61
SMG6-208ENST00000570874 CCNB3Q8WWL7 1395 aa5.01□□□□□ -1.61
SMG6-208ENST00000570874 KDM6BO15054 1643 aa5.01□□□□□ -1.61
SMG6-208ENST00000570874 MYO5CQ9NQX4 1742 aa5□□□□□ -1.61
SMG6-208ENST00000570874 ITGAEP38570 1179 aa5□□□□□ -1.61
SMG6-208ENST00000570874 MNX1P50219 401 aaPredicted RBP5□□□□□ -1.61
SMG6-208ENST00000570874 FOXD4L5Q5VV16 416 aaPredicted RBP5□□□□□ -1.61
SMG6-208ENST00000570874 CC2D2BQ6DHV5 1058 aa5□□□□□ -1.61
SMG6-208ENST00000570874 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5□□□□□ -1.61
SMG6-208ENST00000570874 FOXD4L4Q8WXT5 416 aaPredicted RBP5□□□□□ -1.61
SMG6-208ENST00000570874 MTUS2Q5JR59 1369 aa5□□□□□ -1.61
SMG6-208ENST00000570874 DNMT1P26358 1616 aaKnown RBP4.99□□□□□ -1.61
SMG6-208ENST00000570874 IER5LQ5T953 404 aa4.99□□□□□ -1.61
SMG6-208ENST00000570874 AEBP1Q8IUX7 1158 aa4.99□□□□□ -1.61
SMG6-208ENST00000570874 TTC37Q6PGP7 1564 aa4.99□□□□□ -1.61
SMG6-208ENST00000570874 ARID4BQ4LE39 1312 aaPredicted RBP4.98□□□□□ -1.61
SMG6-208ENST00000570874 CARMIL2Q6F5E8 1435 aa4.98□□□□□ -1.61
SMG6-208ENST00000570874 FGD6Q6ZV73 1430 aa4.98□□□□□ -1.61
SMG6-208ENST00000570874 PREX2Q70Z35 1606 aa4.98□□□□□ -1.61
SMG6-208ENST00000570874 FAM205CA6NFA0 338 aa4.98□□□□□ -1.61
SMG6-208ENST00000570874 TTLL13PA6NNM8 815 aa4.98□□□□□ -1.61
SMG6-208ENST00000570874 ZNF428Q96B54 188 aa4.98□□□□□ -1.61
SMG6-208ENST00000570874 KIF12Q96FN5 646 aa4.98□□□□□ -1.61
SMG6-208ENST00000570874 ATP10BO94823 1461 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms