RNA–Protein interactions for RNA: ENST00000569889.1

RBFOX1-218, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5

Gene RBFOX1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-218ENST00000569889 CEP170BQ9Y4F5 1589 aaPredicted RBP19.41■□□□□ 0.7
RBFOX1-218ENST00000569889 CFAP65Q6ZU64 1925 aaKnown RBP19.4■□□□□ 0.7
RBFOX1-218ENST00000569889 APLP2Q06481 763 aa19.39■□□□□ 0.69
RBFOX1-218ENST00000569889 PKD2Q13563 968 aa19.38■□□□□ 0.69
RBFOX1-218ENST00000569889 LTBP4Q8N2S1 1624 aa19.38■□□□□ 0.69
RBFOX1-218ENST00000569889 ZNF142P52746 1687 aaPredicted RBP19.37■□□□□ 0.69
RBFOX1-218ENST00000569889 TNRQ92752 1358 aa19.37■□□□□ 0.69
RBFOX1-218ENST00000569889 SOCS7O14512 581 aa19.37■□□□□ 0.69
RBFOX1-218ENST00000569889 UBAP1LF5GYI3 381 aa19.35■□□□□ 0.69
RBFOX1-218ENST00000569889 ARHGEF5Q12774 1597 aa19.35■□□□□ 0.69
RBFOX1-218ENST00000569889 A2ML1A8K2U0 1454 aa19.34■□□□□ 0.69
RBFOX1-218ENST00000569889 DNMT1P26358 1616 aaKnown RBP19.33■□□□□ 0.69
RBFOX1-218ENST00000569889 KDM5DQ9BY66 1539 aa19.33■□□□□ 0.68
RBFOX1-218ENST00000569889 SCAF1Q9H7N4 1312 aaKnown RBP19.31■□□□□ 0.68
RBFOX1-218ENST00000569889 PLA2R1Q13018 1463 aa19.31■□□□□ 0.68
RBFOX1-218ENST00000569889 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.3■□□□□ 0.68
RBFOX1-218ENST00000569889 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.3■□□□□ 0.68
RBFOX1-218ENST00000569889 PZPP20742 1482 aa19.29■□□□□ 0.68
RBFOX1-218ENST00000569889 TCOF1Q13428 1488 aaKnown RBP19.29■□□□□ 0.68
RBFOX1-218ENST00000569889 MYOM3Q5VTT5 1437 aa19.29■□□□□ 0.68
RBFOX1-218ENST00000569889 RRP7BPQ9NSQ0 103 aa19.29■□□□□ 0.68
RBFOX1-218ENST00000569889 ANKLE2Q86XL3 938 aa19.28■□□□□ 0.68
RBFOX1-218ENST00000569889 THEMISQ8N1K5 641 aaPredicted RBP19.28■□□□□ 0.68
RBFOX1-218ENST00000569889 MIA2Q96PC5 1412 aa19.27■□□□□ 0.68
RBFOX1-218ENST00000569889 POLR1AO95602 1720 aaPredicted RBP19.26■□□□□ 0.67
RBFOX1-218ENST00000569889 CHIC2Q9UKJ5 165 aa19.26■□□□□ 0.67
RBFOX1-218ENST00000569889 PIP4K2BP78356 416 aa19.25■□□□□ 0.67
RBFOX1-218ENST00000569889 CEP152O94986 1710 aa19.25■□□□□ 0.67
RBFOX1-218ENST00000569889 MAP3K1Q13233 1512 aa19.24■□□□□ 0.67
RBFOX1-218ENST00000569889 MAST1Q9Y2H9 1570 aa19.23■□□□□ 0.67
RBFOX1-218ENST00000569889 SENP3Q9H4L4 574 aaPredicted RBP19.23■□□□□ 0.67
RBFOX1-218ENST00000569889 UGGT1Q9NYU2 1555 aa19.23■□□□□ 0.67
RBFOX1-218ENST00000569889 IQSEC2Q5JU85 1478 aa19.22■□□□□ 0.67
RBFOX1-218ENST00000569889 ABCC3O15438 1527 aa19.22■□□□□ 0.67
RBFOX1-218ENST00000569889 FAM135AQ9P2D6 1515 aa19.21■□□□□ 0.67
RBFOX1-218ENST00000569889 RNF17Q9BXT8 1623 aaKnown RBP19.21■□□□□ 0.67
RBFOX1-218ENST00000569889 PTPN23Q9H3S7 1636 aa19.21■□□□□ 0.67
RBFOX1-218ENST00000569889 KIF15Q9NS87 1388 aa19.19■□□□□ 0.66
RBFOX1-218ENST00000569889 NEURL4Q96JN8 1562 aa19.19■□□□□ 0.66
RBFOX1-218ENST00000569889 NLRP1Q9C000 1473 aa19.19■□□□□ 0.66
RBFOX1-218ENST00000569889 ABCC5O15440 1437 aa19.18■□□□□ 0.66
RBFOX1-218ENST00000569889 NPHP4O75161 1426 aaPredicted RBP19.18■□□□□ 0.66
RBFOX1-218ENST00000569889 DUOX2Q9NRD8 1548 aa19.18■□□□□ 0.66
RBFOX1-218ENST00000569889 EIF2AK4Q9P2K8 1649 aaKnown RBP19.18■□□□□ 0.66
RBFOX1-218ENST00000569889 SHANK2Q9UPX8 1470 aa19.17■□□□□ 0.66
RBFOX1-218ENST00000569889 FAM50AQ14320 339 aaKnown RBP19.17■□□□□ 0.66
RBFOX1-218ENST00000569889 SPATA31D1Q6ZQQ2 1576 aa19.16■□□□□ 0.66
RBFOX1-218ENST00000569889 ZC3H13Q5T200 1668 aaKnown RBP19.16■□□□□ 0.66
RBFOX1-218ENST00000569889 ERVK-7P63135 1459 aa19.16■□□□□ 0.66
RBFOX1-218ENST00000569889 MROH1Q8NDA8 1641 aa19.15■□□□□ 0.66
RBFOX1-218ENST00000569889 TOM1O60784 492 aa19.15■□□□□ 0.66
RBFOX1-218ENST00000569889 STAG3Q9UJ98 1225 aa19.15■□□□□ 0.66
RBFOX1-218ENST00000569889 CROCC2H7BZ55 1655 aa19.14■□□□□ 0.66
RBFOX1-218ENST00000569889 DAPK1P53355 1430 aa19.14■□□□□ 0.65
RBFOX1-218ENST00000569889 FGD6Q6ZV73 1430 aa19.12■□□□□ 0.65
RBFOX1-218ENST00000569889 HSPA1LP34931 641 aa19.12■□□□□ 0.65
RBFOX1-218ENST00000569889 TXNDC2Q86VQ3 553 aa19.12■□□□□ 0.65
RBFOX1-218ENST00000569889 IQGAP1P46940 1657 aa19.11■□□□□ 0.65
RBFOX1-218ENST00000569889 KANK1Q14678 1352 aa19.11■□□□□ 0.65
RBFOX1-218ENST00000569889 CPS1P31327 1500 aa19.1■□□□□ 0.65
RBFOX1-218ENST00000569889 VWDEQ8N2E2 1590 aa19.1■□□□□ 0.65
RBFOX1-218ENST00000569889 ANKRD30AQ9BXX3 1397 aa19.09■□□□□ 0.65
RBFOX1-218ENST00000569889 UBR1Q8IWV7 1749 aa19.08■□□□□ 0.65
RBFOX1-218ENST00000569889 DEPDC5O75140 1603 aa19.08■□□□□ 0.65
RBFOX1-218ENST00000569889 LTKP29376 864 aa19.08■□□□□ 0.64
RBFOX1-218ENST00000569889 ERBINQ96RT1 1412 aa19.08■□□□□ 0.64
RBFOX1-218ENST00000569889 EID1Q9Y6B2 187 aa19.07■□□□□ 0.64
RBFOX1-218ENST00000569889 STRCP1A6NGW2 1772 aa19.06■□□□□ 0.64
RBFOX1-218ENST00000569889 MED14O60244 1454 aa19.06■□□□□ 0.64
RBFOX1-218ENST00000569889 PPARGC1BQ86YN6 1023 aaKnown RBP19.06■□□□□ 0.64
RBFOX1-218ENST00000569889 BCANQ96GW7 911 aa19.05■□□□□ 0.64
RBFOX1-218ENST00000569889 PRDM15P57071 1507 aaPredicted RBP19.04■□□□□ 0.64
RBFOX1-218ENST00000569889 PIK3C2BO00750 1634 aa19.03■□□□□ 0.64
RBFOX1-218ENST00000569889 SCAF11Q99590 1463 aaKnown RBP19.03■□□□□ 0.64
RBFOX1-218ENST00000569889 IDI1Q13907 227 aa19.02■□□□□ 0.64
RBFOX1-218ENST00000569889 ITGAEP38570 1179 aa19.01■□□□□ 0.63
RBFOX1-218ENST00000569889 LRRC7Q96NW7 1537 aa19■□□□□ 0.63
RBFOX1-218ENST00000569889 ARHGAP31Q2M1Z3 1444 aa19■□□□□ 0.63
RBFOX1-218ENST00000569889 RBM33Q96EV2 1170 aaKnown RBP18.98■□□□□ 0.63
RBFOX1-218ENST00000569889 SLC26A8Q96RN1 970 aa18.98■□□□□ 0.63
RBFOX1-218ENST00000569889 CHGAP10645 457 aaKnown RBP18.97■□□□□ 0.63
RBFOX1-218ENST00000569889 TMEM2Q9UHN6 1383 aa18.96■□□□□ 0.63
RBFOX1-218ENST00000569889 PHF23Q9BUL5 403 aaPredicted RBP18.95■□□□□ 0.62
RBFOX1-218ENST00000569889 ARHGAP23Q9P227 1491 aa18.95■□□□□ 0.62
RBFOX1-218ENST00000569889 SLIT1O75093 1534 aa18.95■□□□□ 0.62
RBFOX1-218ENST00000569889 EFCAB6Q5THR3 1501 aa18.94■□□□□ 0.62
RBFOX1-218ENST00000569889 ANKRD50Q9ULJ7 1429 aa18.93■□□□□ 0.62
RBFOX1-218ENST00000569889 SYNMO15061 1565 aa18.93■□□□□ 0.62
RBFOX1-218ENST00000569889 ALKQ9UM73 1620 aa18.92■□□□□ 0.62
RBFOX1-218ENST00000569889 PROSER2Q86WR7 435 aaPredicted RBP18.92■□□□□ 0.62
RBFOX1-218ENST00000569889 MED1Q15648 1581 aaPredicted RBP18.91■□□□□ 0.62
RBFOX1-218ENST00000569889 PPP1R15AO75807 674 aaPredicted RBP18.91■□□□□ 0.62
RBFOX1-218ENST00000569889 NUTM2DQ5VT03 806 aaPredicted RBP18.91■□□□□ 0.62
RBFOX1-218ENST00000569889 MYO5BQ9ULV0 1848 aa18.9■□□□□ 0.62
RBFOX1-218ENST00000569889 ADGRL2O95490 1459 aa18.9■□□□□ 0.62
RBFOX1-218ENST00000569889 LMTK2Q8IWU2 1503 aa18.9■□□□□ 0.62
RBFOX1-218ENST00000569889 XIRP1Q702N8 1843 aaKnown RBP18.9■□□□□ 0.62
RBFOX1-218ENST00000569889 SLC52A1Q9NWF4 448 aa18.88■□□□□ 0.61
RBFOX1-218ENST00000569889 KCNA6P17658 529 aa18.87■□□□□ 0.61
RBFOX1-218ENST00000569889 NOS1P29475 1434 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms