RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, human

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VCPKMT-205	ENST00000569518	RICTOR	Q6R327	1708 aa		32.37	■■■□□ 2.77
VCPKMT-205	ENST00000569518	FAM69C	Q0P6D2	419 aa		32.37	■■■□□ 2.77
VCPKMT-205	ENST00000569518	PPRC1	Q5VV67	1664 aa	Known RBP	32.36	■■■□□ 2.77
VCPKMT-205	ENST00000569518	DIEXF	Q68CQ4	756 aa	Known RBP	32.34	■■■□□ 2.77
VCPKMT-205	ENST00000569518	L3MBTL2	Q969R5	705 aa		32.34	■■■□□ 2.77
VCPKMT-205	ENST00000569518	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	32.34	■■■□□ 2.77
VCPKMT-205	ENST00000569518	VWDE	Q8N2E2	1590 aa		32.32	■■■□□ 2.76
VCPKMT-205	ENST00000569518	MROH1	Q8NDA8	1641 aa		32.31	■■■□□ 2.76
VCPKMT-205	ENST00000569518	ABCA6	Q8N139	1617 aa		32.3	■■■□□ 2.76
VCPKMT-205	ENST00000569518	PRDM15	P57071	1507 aa	Predicted RBP	32.3	■■■□□ 2.76
VCPKMT-205	ENST00000569518	KIF13A	Q9H1H9	1805 aa		32.3	■■■□□ 2.76
VCPKMT-205	ENST00000569518	FRMPD1	Q5SYB0	1578 aa		32.29	■■■□□ 2.76
VCPKMT-205	ENST00000569518	MYT1L	Q9UL68	1186 aa		32.29	■■■□□ 2.76
VCPKMT-205	ENST00000569518	A2M	P01023	1474 aa		32.29	■■■□□ 2.76
VCPKMT-205	ENST00000569518	PLA2R1	Q13018	1463 aa		32.27	■■■□□ 2.76
VCPKMT-205	ENST00000569518	TSPOAP1	O95153	1857 aa		32.26	■■■□□ 2.75
VCPKMT-205	ENST00000569518	ATP10A	O60312	1499 aa		32.25	■■■□□ 2.75
VCPKMT-205	ENST00000569518	RNF17	Q9BXT8	1623 aa	Known RBP	32.25	■■■□□ 2.75
VCPKMT-205	ENST00000569518	RAPGEF3	O95398	923 aa		32.25	■■■□□ 2.75
VCPKMT-205	ENST00000569518	BCORL1	Q5H9F3	1711 aa		32.25	■■■□□ 2.75
VCPKMT-205	ENST00000569518	TET3	O43151	1660 aa		32.24	■■■□□ 2.75
VCPKMT-205	ENST00000569518		E9PCH4	1651 aa		32.23	■■■□□ 2.75
VCPKMT-205	ENST00000569518	DIP2C	Q9Y2E4	1556 aa		32.22	■■■□□ 2.75
VCPKMT-205	ENST00000569518	KIF3B	O15066	747 aa		32.21	■■■□□ 2.75
VCPKMT-205	ENST00000569518	ZMYM4	Q5VZL5	1548 aa		32.2	■■■□□ 2.75
VCPKMT-205	ENST00000569518	KANK1	Q14678	1352 aa		32.17	■■■□□ 2.74
VCPKMT-205	ENST00000569518	CCDC144A	A2RUR9	1427 aa		32.16	■■■□□ 2.74
VCPKMT-205	ENST00000569518	LMTK2	Q8IWU2	1503 aa		32.12	■■■□□ 2.73
VCPKMT-205	ENST00000569518	NBPF8	Q3BBV2	869 aa		32.12	■■■□□ 2.73
VCPKMT-205	ENST00000569518	SPHKAP	Q2M3C7	1700 aa		32.1	■■■□□ 2.73
VCPKMT-205	ENST00000569518	PTPRT	O14522	1441 aa		32.09	■■■□□ 2.73
VCPKMT-205	ENST00000569518	YEATS2	Q9ULM3	1422 aa		32.09	■■■□□ 2.73
VCPKMT-205	ENST00000569518	TRPM2	O94759	1503 aa		32.09	■■■□□ 2.73
VCPKMT-205	ENST00000569518	EFCAB6	Q5THR3	1501 aa		32.08	■■■□□ 2.73
VCPKMT-205	ENST00000569518	UHRF1BP1	Q6BDS2	1440 aa		32.07	■■■□□ 2.72
VCPKMT-205	ENST00000569518	CEP152	O94986	1710 aa		32.06	■■■□□ 2.72
VCPKMT-205	ENST00000569518	CLTCL1	P53675	1640 aa		31.97	■■■□□ 2.71
VCPKMT-205	ENST00000569518	ABCC3	O15438	1527 aa		31.97	■■■□□ 2.71
VCPKMT-205	ENST00000569518	RERE	Q9P2R6	1566 aa		31.97	■■■□□ 2.71
VCPKMT-205	ENST00000569518	HIRIP3	Q9BW71	556 aa	Predicted RBP	31.96	■■■□□ 2.71
VCPKMT-205	ENST00000569518	SPATA31E1	Q6ZUB1	1445 aa		31.95	■■■□□ 2.71
VCPKMT-205	ENST00000569518	COL17A1	Q9UMD9	1497 aa	Predicted RBP	31.95	■■■□□ 2.71
VCPKMT-205	ENST00000569518	RALGAPB	Q86X10	1494 aa		31.95	■■■□□ 2.7
VCPKMT-205	ENST00000569518	HSPA5	P11021	654 aa	Known RBP	31.91	■■■□□ 2.7
VCPKMT-205	ENST00000569518	EIF4G2	P78344	907 aa	Known RBP eCLIP	31.91	■■■□□ 2.7
VCPKMT-205	ENST00000569518	GGT6	Q6P531	493 aa		31.91	■■■□□ 2.7
VCPKMT-205	ENST00000569518	DCAF11	Q8TEB1	546 aa		31.91	■■■□□ 2.7
VCPKMT-205	ENST00000569518	ZC3H13	Q5T200	1668 aa	Known RBP	31.9	■■■□□ 2.7
VCPKMT-205	ENST00000569518	CAMSAP1	Q5T5Y3	1602 aa		31.9	■■■□□ 2.7
VCPKMT-205	ENST00000569518	NEURL4	Q96JN8	1562 aa		31.89	■■■□□ 2.7
VCPKMT-205	ENST00000569518	NPAT	Q14207	1427 aa		31.87	■■■□□ 2.69
VCPKMT-205	ENST00000569518	PRAG1	Q86YV5	1406 aa		31.87	■■■□□ 2.69
VCPKMT-205	ENST00000569518	ZNF326	Q5BKZ1	582 aa	Known RBP	31.86	■■■□□ 2.69
VCPKMT-205	ENST00000569518	AGL	P35573	1532 aa		31.86	■■■□□ 2.69
VCPKMT-205	ENST00000569518	ARHGEF40	Q8TER5	1519 aa		31.86	■■■□□ 2.69
VCPKMT-205	ENST00000569518	TRPM1	Q7Z4N2	1603 aa		31.84	■■■□□ 2.69
VCPKMT-205	ENST00000569518	RGL3	Q3MIN7	710 aa		31.84	■■■□□ 2.69
VCPKMT-205	ENST00000569518	MIER1	Q8N108	512 aa		31.84	■■■□□ 2.69
VCPKMT-205	ENST00000569518	KDM2A	Q9Y2K7	1162 aa		31.84	■■■□□ 2.69
VCPKMT-205	ENST00000569518	WASHC2C	Q9Y4E1	1318 aa		31.83	■■■□□ 2.69
VCPKMT-205	ENST00000569518	UGGT1	Q9NYU2	1555 aa		31.82	■■■□□ 2.68
VCPKMT-205	ENST00000569518	SIGLEC1	Q9BZZ2	1709 aa		31.79	■■■□□ 2.68
VCPKMT-205	ENST00000569518	ARHGAP31	Q2M1Z3	1444 aa		31.79	■■■□□ 2.68
VCPKMT-205	ENST00000569518	CNTLN	Q9NXG0	1405 aa		31.77	■■■□□ 2.68
VCPKMT-205	ENST00000569518	KIF1B	O60333	1816 aa		31.77	■■■□□ 2.68
VCPKMT-205	ENST00000569518	USP47	Q96K76	1375 aa		31.75	■■■□□ 2.67
VCPKMT-205	ENST00000569518	NOS1	P29475	1434 aa		31.74	■■■□□ 2.67
VCPKMT-205	ENST00000569518	DDX10	Q13206	875 aa	Known RBP	31.74	■■■□□ 2.67
VCPKMT-205	ENST00000569518	POLR1A	O95602	1720 aa	Predicted RBP	31.73	■■■□□ 2.67
VCPKMT-205	ENST00000569518	MADD	Q8WXG6	1647 aa		31.73	■■■□□ 2.67
VCPKMT-205	ENST00000569518	LAMC1	P11047	1609 aa		31.72	■■■□□ 2.67
VCPKMT-205	ENST00000569518	CFAP65	Q6ZU64	1925 aa	Known RBP	31.72	■■■□□ 2.67
VCPKMT-205	ENST00000569518	MROH2A	A6NES4	1674 aa		31.71	■■■□□ 2.67
VCPKMT-205	ENST00000569518	ADGRB3	O60242	1522 aa		31.71	■■■□□ 2.67
VCPKMT-205	ENST00000569518	GPRASP1	Q5JY77	1395 aa		31.7	■■■□□ 2.67
VCPKMT-205	ENST00000569518	WASHC2A	Q641Q2	1341 aa		31.7	■■■□□ 2.66
VCPKMT-205	ENST00000569518	PIK3C2B	O00750	1634 aa		31.69	■■■□□ 2.66
VCPKMT-205	ENST00000569518	SYNM	O15061	1565 aa		31.69	■■■□□ 2.66
VCPKMT-205	ENST00000569518	STAC3	Q96MF2	364 aa		31.68	■■■□□ 2.66
VCPKMT-205	ENST00000569518	IFT172	Q9UG01	1749 aa		31.68	■■■□□ 2.66
VCPKMT-205	ENST00000569518	ROCK2	O75116	1388 aa	Known RBP	31.68	■■■□□ 2.66
VCPKMT-205	ENST00000569518	CARD11	Q9BXL7	1154 aa		31.67	■■■□□ 2.66
VCPKMT-205	ENST00000569518	PPP6R1	Q9UPN7	881 aa		31.65	■■■□□ 2.66
VCPKMT-205	ENST00000569518	MYOM2	P54296	1465 aa		31.63	■■■□□ 2.65
VCPKMT-205	ENST00000569518	C11orf95	C9JLR9	678 aa	Predicted RBP	31.63	■■■□□ 2.65
VCPKMT-205	ENST00000569518	CCDC7	Q96M83	1385 aa		31.63	■■■□□ 2.65
VCPKMT-205	ENST00000569518	PREX1	Q8TCU6	1659 aa		31.63	■■■□□ 2.65
VCPKMT-205	ENST00000569518	DNAJC5	Q9H3Z4	198 aa		31.62	■■■□□ 2.65
VCPKMT-205	ENST00000569518	NBPF1	Q3BBV0	1214 aa		31.59	■■■□□ 2.65
VCPKMT-205	ENST00000569518	CLTC	Q00610	1675 aa	Known RBP	31.58	■■■□□ 2.65
VCPKMT-205	ENST00000569518	KIAA1210	Q9ULL0	1709 aa		31.57	■■■□□ 2.64
VCPKMT-205	ENST00000569518	NRXN1	Q9ULB1	1477 aa		31.55	■■■□□ 2.64
VCPKMT-205	ENST00000569518	KIF7	Q2M1P5	1343 aa		31.54	■■■□□ 2.64
VCPKMT-205	ENST00000569518	PPL	O60437	1756 aa		31.54	■■■□□ 2.64
VCPKMT-205	ENST00000569518	ERVK-7	P63135	1459 aa		31.51	■■■□□ 2.64
VCPKMT-205	ENST00000569518	TRH	P20396	242 aa	Predicted RBP	31.5	■■■□□ 2.63
VCPKMT-205	ENST00000569518	IQGAP1	P46940	1657 aa		31.49	■■■□□ 2.63
VCPKMT-205	ENST00000569518	ST20-MTHFS	A0A0A6YYL1	179 aa		31.49	■■■□□ 2.63
VCPKMT-205	ENST00000569518	ARID4B	Q4LE39	1312 aa	Predicted RBP	31.48	■■■□□ 2.63
VCPKMT-205	ENST00000569518	SLC52A1	Q9NWF4	448 aa		31.47	■■■□□ 2.63

Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms