RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 REREQ9P2R6 1566 aa11.21□□□□□ -0.61
CDH13-214ENST00000569455 ATP10AO60312 1499 aa11.21□□□□□ -0.61
CDH13-214ENST00000569455 INO80Q9ULG1 1556 aaPredicted RBP11.2□□□□□ -0.62
CDH13-214ENST00000569455 KIDINS220Q9ULH0 1771 aa11.2□□□□□ -0.62
CDH13-214ENST00000569455 ATP7AQ04656 1500 aa11.19□□□□□ -0.62
CDH13-214ENST00000569455 ANKRD50Q9ULJ7 1429 aa11.18□□□□□ -0.62
CDH13-214ENST00000569455 KIF15Q9NS87 1388 aa11.18□□□□□ -0.62
CDH13-214ENST00000569455 TRIM52Q96A61 297 aa11.18□□□□□ -0.62
CDH13-214ENST00000569455 DIP2CQ9Y2E4 1556 aa11.17□□□□□ -0.62
CDH13-214ENST00000569455 AGLP35573 1532 aa11.17□□□□□ -0.62
CDH13-214ENST00000569455 DUOX2Q9NRD8 1548 aa11.16□□□□□ -0.62
CDH13-214ENST00000569455 MYT1LQ9UL68 1186 aa11.16□□□□□ -0.62
CDH13-214ENST00000569455 PREX1Q8TCU6 1659 aa11.16□□□□□ -0.62
CDH13-214ENST00000569455 YEATS2Q9ULM3 1422 aa11.16□□□□□ -0.62
CDH13-214ENST00000569455 ABCA6Q8N139 1617 aa11.16□□□□□ -0.62
CDH13-214ENST00000569455 DMRT2Q9Y5R5 561 aa11.15□□□□□ -0.62
CDH13-214ENST00000569455 PLPPR3Q6T4P5 718 aa11.14□□□□□ -0.63
CDH13-214ENST00000569455 FER1L4A9Z1Z3 1794 aa11.13□□□□□ -0.63
CDH13-214ENST00000569455 STRCQ7RTU9 1775 aa11.13□□□□□ -0.63
CDH13-214ENST00000569455 A2MP01023 1474 aa11.13□□□□□ -0.63
CDH13-214ENST00000569455 IQSEC2Q5JU85 1478 aa11.13□□□□□ -0.63
CDH13-214ENST00000569455 ERBINQ96RT1 1412 aa11.13□□□□□ -0.63
CDH13-214ENST00000569455 PPP6R1Q9UPN7 881 aa11.13□□□□□ -0.63
CDH13-214ENST00000569455 DHX29Q7Z478 1369 aaKnown RBP11.13□□□□□ -0.63
CDH13-214ENST00000569455 MPHOSPH9Q99550 1183 aa11.12□□□□□ -0.63
CDH13-214ENST00000569455 KDM5DQ9BY66 1539 aa11.11□□□□□ -0.63
CDH13-214ENST00000569455 UNC13BO14795 1591 aa11.11□□□□□ -0.63
CDH13-214ENST00000569455 EIF2AK4Q9P2K8 1649 aaKnown RBP11.1□□□□□ -0.63
CDH13-214ENST00000569455 FAM135AQ9P2D6 1515 aa11.09□□□□□ -0.63
CDH13-214ENST00000569455 PZPP20742 1482 aa11.09□□□□□ -0.63
CDH13-214ENST00000569455 NUP155O75694 1391 aa11.09□□□□□ -0.63
CDH13-214ENST00000569455 SLC4A1APQ9BWU0 796 aaKnown RBP11.09□□□□□ -0.63
CDH13-214ENST00000569455 TIMELESSQ9UNS1 1208 aa11.09□□□□□ -0.63
CDH13-214ENST00000569455 SIGLEC1Q9BZZ2 1709 aa11.08□□□□□ -0.64
CDH13-214ENST00000569455 LTBP4Q8N2S1 1624 aa11.08□□□□□ -0.64
CDH13-214ENST00000569455 PTPRTO14522 1441 aa11.08□□□□□ -0.64
CDH13-214ENST00000569455 CNTLNQ9NXG0 1405 aa11.07□□□□□ -0.64
CDH13-214ENST00000569455 IQGAP3Q86VI3 1631 aa11.06□□□□□ -0.64
CDH13-214ENST00000569455 NEUROD1Q13562 356 aa11.05□□□□□ -0.64
CDH13-214ENST00000569455 SIN3AQ96ST3 1273 aa11.05□□□□□ -0.64
CDH13-214ENST00000569455 DEPDC5O75140 1603 aa11.05□□□□□ -0.64
CDH13-214ENST00000569455 RNF17Q9BXT8 1623 aaKnown RBP11.05□□□□□ -0.64
CDH13-214ENST00000569455 TONSLQ96HA7 1378 aa11.04□□□□□ -0.64
CDH13-214ENST00000569455 UHRF1BP1Q6BDS2 1440 aa11.04□□□□□ -0.64
CDH13-214ENST00000569455 ESF1Q9H501 851 aaKnown RBP11.04□□□□□ -0.64
CDH13-214ENST00000569455 KIF3BO15066 747 aa11.03□□□□□ -0.64
CDH13-214ENST00000569455 PKD2Q13563 968 aa11.03□□□□□ -0.64
CDH13-214ENST00000569455 MROH2AA6NES4 1674 aa11.03□□□□□ -0.64
CDH13-214ENST00000569455 MED1Q15648 1581 aaPredicted RBP11.03□□□□□ -0.64
CDH13-214ENST00000569455 KANK1Q14678 1352 aa11.03□□□□□ -0.64
CDH13-214ENST00000569455 ANKRD30BQ9BXX2 1392 aa11.03□□□□□ -0.64
CDH13-214ENST00000569455 MLECQ14165 292 aa11.02□□□□□ -0.65
CDH13-214ENST00000569455 ZC3H13Q5T200 1668 aaKnown RBP11.01□□□□□ -0.65
CDH13-214ENST00000569455 SETD1BQ9UPS6 1966 aaKnown RBP11.01□□□□□ -0.65
CDH13-214ENST00000569455 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.01□□□□□ -0.65
CDH13-214ENST00000569455 PRDM15P57071 1507 aaPredicted RBP11□□□□□ -0.65
CDH13-214ENST00000569455 FOXD1Q16676 465 aa11□□□□□ -0.65
CDH13-214ENST00000569455 GGT6Q6P531 493 aa11□□□□□ -0.65
CDH13-214ENST00000569455 TET3O43151 1660 aa11□□□□□ -0.65
CDH13-214ENST00000569455 RPRD2Q5VT52 1461 aaKnown RBP11□□□□□ -0.65
CDH13-214ENST00000569455 VWDEQ8N2E2 1590 aa10.99□□□□□ -0.65
CDH13-214ENST00000569455 WASHC2CQ9Y4E1 1318 aa10.98□□□□□ -0.65
CDH13-214ENST00000569455 MROH1Q8NDA8 1641 aa10.98□□□□□ -0.65
CDH13-214ENST00000569455 UBAP1LF5GYI3 381 aa10.97□□□□□ -0.65
CDH13-214ENST00000569455 CEBPAP49715 358 aaPredicted RBP10.97□□□□□ -0.65
CDH13-214ENST00000569455 ZMYM3Q14202 1370 aa10.97□□□□□ -0.65
CDH13-214ENST00000569455 LMTK2Q8IWU2 1503 aa10.97□□□□□ -0.65
CDH13-214ENST00000569455 CLTCQ00610 1675 aaKnown RBP10.97□□□□□ -0.65
CDH13-214ENST00000569455 E9PCH4 1651 aa10.96□□□□□ -0.65
CDH13-214ENST00000569455 NPATQ14207 1427 aa10.96□□□□□ -0.65
CDH13-214ENST00000569455 ARHGAP31Q2M1Z3 1444 aa10.96□□□□□ -0.65
CDH13-214ENST00000569455 C3P01024 1663 aa10.95□□□□□ -0.66
CDH13-214ENST00000569455 ABCC3O15438 1527 aa10.95□□□□□ -0.66
CDH13-214ENST00000569455 PPP1R15AO75807 674 aaPredicted RBP10.95□□□□□ -0.66
CDH13-214ENST00000569455 CEP152O94986 1710 aa10.95□□□□□ -0.66
CDH13-214ENST00000569455 SPHKAPQ2M3C7 1700 aa10.94□□□□□ -0.66
CDH13-214ENST00000569455 CCDC144AA2RUR9 1427 aa10.93□□□□□ -0.66
CDH13-214ENST00000569455 EFCAB6Q5THR3 1501 aa10.93□□□□□ -0.66
CDH13-214ENST00000569455 CAMSAP1Q5T5Y3 1602 aa10.92□□□□□ -0.66
CDH13-214ENST00000569455 ZNF316A6NFI3 1004 aaPredicted RBP10.92□□□□□ -0.66
CDH13-214ENST00000569455 TRPM2O94759 1503 aa10.91□□□□□ -0.66
CDH13-214ENST00000569455 L3MBTL2Q969R5 705 aa10.91□□□□□ -0.66
CDH13-214ENST00000569455 PHF23Q9BUL5 403 aaPredicted RBP10.91□□□□□ -0.66
CDH13-214ENST00000569455 PLA2R1Q13018 1463 aa10.89□□□□□ -0.67
CDH13-214ENST00000569455 ZNF335Q9H4Z2 1342 aaPredicted RBP10.88□□□□□ -0.67
CDH13-214ENST00000569455 HSPA1LP34931 641 aa10.88□□□□□ -0.67
CDH13-214ENST00000569455 NLRP1Q9C000 1473 aa10.87□□□□□ -0.67
CDH13-214ENST00000569455 KIF1BO60333 1816 aa10.87□□□□□ -0.67
CDH13-214ENST00000569455 ERVK-7P63135 1459 aa10.86□□□□□ -0.67
CDH13-214ENST00000569455 CFAP65Q6ZU64 1925 aaKnown RBP10.86□□□□□ -0.67
CDH13-214ENST00000569455 ZNF142P52746 1687 aaPredicted RBP10.85□□□□□ -0.67
CDH13-214ENST00000569455 CLTCL1P53675 1640 aa10.85□□□□□ -0.67
CDH13-214ENST00000569455 SLC52A1Q9NWF4 448 aa10.85□□□□□ -0.67
CDH13-214ENST00000569455 TNRQ92752 1358 aa10.85□□□□□ -0.67
CDH13-214ENST00000569455 NEURL4Q96JN8 1562 aa10.85□□□□□ -0.67
CDH13-214ENST00000569455 KDM5AP29375 1690 aaKnown RBP10.85□□□□□ -0.67
CDH13-214ENST00000569455 SCAF1Q9H7N4 1312 aaKnown RBP10.84□□□□□ -0.67
CDH13-214ENST00000569455 NOS1P29475 1434 aa10.84□□□□□ -0.67
CDH13-214ENST00000569455 MYO3AQ8NEV4 1616 aa10.84□□□□□ -0.67
CDH13-214ENST00000569455 A2ML1A8K2U0 1454 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms