RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 RIOK3O14730 519 aaKnown RBP10.17□□□□□ -0.78
CDH13-212ENST00000569144 EFCAB5A4FU69 1503 aa10.17□□□□□ -0.78
CDH13-212ENST00000569144 ZFYVE16Q7Z3T8 1539 aa10.17□□□□□ -0.78
CDH13-212ENST00000569144 MAGI2Q86UL8 1455 aa10.17□□□□□ -0.78
CDH13-212ENST00000569144 TRPC6Q9Y210 931 aa10.16□□□□□ -0.78
CDH13-212ENST00000569144 PRXQ9BXM0 1461 aa10.16□□□□□ -0.78
CDH13-212ENST00000569144 CFAP74Q9C0B2 1584 aa10.15□□□□□ -0.78
CDH13-212ENST00000569144 SIGLEC1Q9BZZ2 1709 aa10.15□□□□□ -0.78
CDH13-212ENST00000569144 PREX1Q8TCU6 1659 aa10.15□□□□□ -0.79
CDH13-212ENST00000569144 RAPGEF6Q8TEU7 1601 aa10.15□□□□□ -0.79
CDH13-212ENST00000569144 FER1L4A9Z1Z3 1794 aa10.14□□□□□ -0.79
CDH13-212ENST00000569144 MLECQ14165 292 aa10.14□□□□□ -0.79
CDH13-212ENST00000569144 P3H3Q8IVL6 736 aa10.14□□□□□ -0.79
CDH13-212ENST00000569144 ARHGEF12Q9NZN5 1544 aa10.13□□□□□ -0.79
CDH13-212ENST00000569144 NUP153P49790 1475 aaKnown RBP10.12□□□□□ -0.79
CDH13-212ENST00000569144 PTPRTO14522 1441 aa10.12□□□□□ -0.79
CDH13-212ENST00000569144 SAMD9Q5K651 1589 aa10.12□□□□□ -0.79
CDH13-212ENST00000569144 STRCQ7RTU9 1775 aa10.11□□□□□ -0.79
CDH13-212ENST00000569144 IQSEC2Q5JU85 1478 aa10.11□□□□□ -0.79
CDH13-212ENST00000569144 UHRF1BP1Q6BDS2 1440 aa10.11□□□□□ -0.79
CDH13-212ENST00000569144 VGFO15240 615 aaPredicted RBP10.11□□□□□ -0.79
CDH13-212ENST00000569144 HECW1Q76N89 1606 aa10.11□□□□□ -0.79
CDH13-212ENST00000569144 PLEKHD1A6NEE1 506 aa10.1□□□□□ -0.79
CDH13-212ENST00000569144 PSEN1P49768 467 aa10.1□□□□□ -0.79
CDH13-212ENST00000569144 PDAP1Q13442 181 aaKnown RBP10.1□□□□□ -0.79
CDH13-212ENST00000569144 DCBLD2Q96PD2 775 aa10.1□□□□□ -0.79
CDH13-212ENST00000569144 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.1□□□□□ -0.79
CDH13-212ENST00000569144 C9orf84Q5VXU9 1444 aa10.09□□□□□ -0.79
CDH13-212ENST00000569144 TIE1P35590 1138 aa10.09□□□□□ -0.79
CDH13-212ENST00000569144 TAOK2Q9UL54 1235 aa10.09□□□□□ -0.79
CDH13-212ENST00000569144 ATP10AO60312 1499 aa10.09□□□□□ -0.79
CDH13-212ENST00000569144 LTBP4Q8N2S1 1624 aa10.08□□□□□ -0.8
CDH13-212ENST00000569144 CEBPAP49715 358 aaPredicted RBP10.08□□□□□ -0.8
CDH13-212ENST00000569144 TMEM106CQ9BVX2 250 aa10.08□□□□□ -0.8
CDH13-212ENST00000569144 BMP2KQ9NSY1 1161 aaPredicted RBP10.08□□□□□ -0.8
CDH13-212ENST00000569144 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.07□□□□□ -0.8
CDH13-212ENST00000569144 ZFP91Q96JP5 570 aaPredicted RBP10.07□□□□□ -0.8
CDH13-212ENST00000569144 SCAPERQ9BY12 1400 aa10.07□□□□□ -0.8
CDH13-212ENST00000569144 TTLL13PA6NNM8 815 aa10.05□□□□□ -0.8
CDH13-212ENST00000569144 ATMINO43313 823 aaPredicted RBP10.04□□□□□ -0.8
CDH13-212ENST00000569144 POTEIP0CG38 1075 aa10.04□□□□□ -0.8
CDH13-212ENST00000569144 ASTLQ6HA08 431 aaPredicted RBP10.04□□□□□ -0.8
CDH13-212ENST00000569144 PLCH2O75038 1416 aa10.04□□□□□ -0.8
CDH13-212ENST00000569144 ATN1P54259 1190 aaPredicted RBP10.03□□□□□ -0.8
CDH13-212ENST00000569144 NCOA1Q15788 1441 aa10.02□□□□□ -0.81
CDH13-212ENST00000569144 STK25O00506 426 aa10.02□□□□□ -0.81
CDH13-212ENST00000569144 BCL11BQ9C0K0 894 aaPredicted RBP10.01□□□□□ -0.81
CDH13-212ENST00000569144 SETD1BQ9UPS6 1966 aaKnown RBP10.01□□□□□ -0.81
CDH13-212ENST00000569144 TRAPPC8Q9Y2L5 1435 aa10□□□□□ -0.81
CDH13-212ENST00000569144 ZNF518AQ6AHZ1 1483 aa10□□□□□ -0.81
CDH13-212ENST00000569144 CHGAP10645 457 aaKnown RBP10□□□□□ -0.81
CDH13-212ENST00000569144 TRIM35Q9UPQ4 493 aa10□□□□□ -0.81
CDH13-212ENST00000569144 STK24Q9Y6E0 443 aa10□□□□□ -0.81
CDH13-212ENST00000569144 REREQ9P2R6 1566 aa10□□□□□ -0.81
CDH13-212ENST00000569144 UBAP1LF5GYI3 381 aa9.99□□□□□ -0.81
CDH13-212ENST00000569144 EFCAB2Q5VUJ9 269 aa9.99□□□□□ -0.81
CDH13-212ENST00000569144 KDM5CP41229 1560 aa9.99□□□□□ -0.81
CDH13-212ENST00000569144 C3P01024 1663 aa9.99□□□□□ -0.81
CDH13-212ENST00000569144 PELP1Q8IZL8 1130 aaKnown RBP9.98□□□□□ -0.81
CDH13-212ENST00000569144 CABP2Q9NPB3 220 aa9.98□□□□□ -0.81
CDH13-212ENST00000569144 AGLP35573 1532 aa9.97□□□□□ -0.81
CDH13-212ENST00000569144 DIP2CQ9Y2E4 1556 aa9.97□□□□□ -0.81
CDH13-212ENST00000569144 GOLGA2Q08379 1002 aa9.97□□□□□ -0.81
CDH13-212ENST00000569144 HS6ST3Q8IZP7 471 aa9.97□□□□□ -0.81
CDH13-212ENST00000569144 CDK13Q14004 1512 aaKnown RBP9.97□□□□□ -0.81
CDH13-212ENST00000569144 AFAP1Q8N556 730 aa9.96□□□□□ -0.82
CDH13-212ENST00000569144 ESF1Q9H501 851 aaKnown RBP9.96□□□□□ -0.82
CDH13-212ENST00000569144 CNTLNQ9NXG0 1405 aa9.96□□□□□ -0.82
CDH13-212ENST00000569144 CAMSAP1Q5T5Y3 1602 aa9.96□□□□□ -0.82
CDH13-212ENST00000569144 RANGAP1P46060 587 aaPredicted RBP9.95□□□□□ -0.82
CDH13-212ENST00000569144 ZNF335Q9H4Z2 1342 aaPredicted RBP9.95□□□□□ -0.82
CDH13-212ENST00000569144 MED1Q15648 1581 aaPredicted RBP9.95□□□□□ -0.82
CDH13-212ENST00000569144 MYO5CQ9NQX4 1742 aa9.95□□□□□ -0.82
CDH13-212ENST00000569144 MLH3Q9UHC1 1453 aa9.94□□□□□ -0.82
CDH13-212ENST00000569144 NPATQ14207 1427 aa9.94□□□□□ -0.82
CDH13-212ENST00000569144 MYT1LQ9UL68 1186 aa9.94□□□□□ -0.82
CDH13-212ENST00000569144 ABCA6Q8N139 1617 aa9.93□□□□□ -0.82
CDH13-212ENST00000569144 MKRN3Q13064 507 aaKnown RBP9.93□□□□□ -0.82
CDH13-212ENST00000569144 ARHGAP5Q13017 1502 aa9.92□□□□□ -0.82
CDH13-212ENST00000569144 PLA2R1Q13018 1463 aa9.92□□□□□ -0.82
CDH13-212ENST00000569144 NCKAP5LQ9HCH0 1330 aa9.92□□□□□ -0.82
CDH13-212ENST00000569144 EFCAB3Q8N7B9 438 aa9.92□□□□□ -0.82
CDH13-212ENST00000569144 SLC39A7Q92504 469 aa9.92□□□□□ -0.82
CDH13-212ENST00000569144 CDK11AQ9UQ88 783 aaPredicted RBP9.91□□□□□ -0.82
CDH13-212ENST00000569144 KIF14Q15058 1648 aa9.9□□□□□ -0.82
CDH13-212ENST00000569144 HSPA1LP34931 641 aa9.9□□□□□ -0.82
CDH13-212ENST00000569144 TCOF1Q13428 1488 aaKnown RBP9.9□□□□□ -0.83
CDH13-212ENST00000569144 C7P10643 843 aa9.89□□□□□ -0.83
CDH13-212ENST00000569144 IER5LQ5T953 404 aa9.89□□□□□ -0.83
CDH13-212ENST00000569144 METRNQ9UJH8 293 aa9.89□□□□□ -0.83
CDH13-212ENST00000569144 MROH2AA6NES4 1674 aa9.89□□□□□ -0.83
CDH13-212ENST00000569144 TROQ12816 1431 aaPredicted RBP9.89□□□□□ -0.83
CDH13-212ENST00000569144 ZMYM3Q14202 1370 aa9.88□□□□□ -0.83
CDH13-212ENST00000569144 ABCC1P33527 1531 aa9.87□□□□□ -0.83
CDH13-212ENST00000569144 ZNF142P52746 1687 aaPredicted RBP9.87□□□□□ -0.83
CDH13-212ENST00000569144 TOM1O60784 492 aa9.87□□□□□ -0.83
CDH13-212ENST00000569144 CLIP1P30622 1438 aa9.87□□□□□ -0.83
CDH13-212ENST00000569144 EEA1Q15075 1411 aa9.87□□□□□ -0.83
CDH13-212ENST00000569144 FMN1Q68DA7 1419 aa9.87□□□□□ -0.83
CDH13-212ENST00000569144 MYO3AQ8NEV4 1616 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms