RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 RIMBP2O15034 1052 aa13.79□□□□□ -0.2
CDH11-216ENST00000569128 NUDT7P0C024 238 aa13.79□□□□□ -0.2
CDH11-216ENST00000569128 TMEM132AQ24JP5 1023 aa13.79□□□□□ -0.2
CDH11-216ENST00000569128 EPAS1Q99814 870 aa13.79□□□□□ -0.2
CDH11-216ENST00000569128 PCDHGA10Q9Y5H3 936 aa13.79□□□□□ -0.2
CDH11-216ENST00000569128 BAZ1BQ9UIG0 1483 aaKnown RBP13.79□□□□□ -0.2
CDH11-216ENST00000569128 BRPF1P55201 1214 aaPredicted RBP13.78□□□□□ -0.2
CDH11-216ENST00000569128 RBM33Q96EV2 1170 aaKnown RBP13.78□□□□□ -0.2
CDH11-216ENST00000569128 FCHSD2O94868 740 aa13.77□□□□□ -0.21
CDH11-216ENST00000569128 ZNF710Q8N1W2 664 aa13.77□□□□□ -0.21
CDH11-216ENST00000569128 AK7Q96M32 723 aa13.77□□□□□ -0.21
CDH11-216ENST00000569128 TOP2AP11388 1531 aaKnown RBP13.76□□□□□ -0.21
CDH11-216ENST00000569128 EN1Q05925 392 aaPredicted RBP13.76□□□□□ -0.21
CDH11-216ENST00000569128 GPR153Q6NV75 609 aa13.76□□□□□ -0.21
CDH11-216ENST00000569128 MAP3K7O43318 606 aa13.75□□□□□ -0.21
CDH11-216ENST00000569128 NEUROD2Q15784 382 aa13.75□□□□□ -0.21
CDH11-216ENST00000569128 TYW1BQ6NUM6 668 aa13.75□□□□□ -0.21
CDH11-216ENST00000569128 ZSWIM6Q9HCJ5 1215 aa13.75□□□□□ -0.21
CDH11-216ENST00000569128 JPH4Q96JJ6 628 aa13.74□□□□□ -0.21
CDH11-216ENST00000569128 HMGXB3Q12766 1538 aa13.74□□□□□ -0.21
CDH11-216ENST00000569128 GNPATO15228 680 aa13.73□□□□□ -0.21
CDH11-216ENST00000569128 PTGDRQ13258 359 aa13.73□□□□□ -0.21
CDH11-216ENST00000569128 CDHR5Q9HBB8 845 aa13.73□□□□□ -0.21
CDH11-216ENST00000569128 FOSBP53539 338 aa13.72□□□□□ -0.21
CDH11-216ENST00000569128 HIC1Q14526 733 aa13.72□□□□□ -0.21
CDH11-216ENST00000569128 FECHP22830 423 aa13.71□□□□□ -0.21
CDH11-216ENST00000569128 ZNF454Q8N9F8 522 aa13.71□□□□□ -0.21
CDH11-216ENST00000569128 TSR1Q2NL82 804 aaKnown RBP13.7□□□□□ -0.22
CDH11-216ENST00000569128 FBXW7Q969H0 707 aa13.7□□□□□ -0.22
CDH11-216ENST00000569128 OTUD5Q96G74 571 aa13.7□□□□□ -0.22
CDH11-216ENST00000569128 MINK1Q8N4C8 1332 aaPredicted RBP13.69□□□□□ -0.22
CDH11-216ENST00000569128 TRIM66O15016 1216 aa13.68□□□□□ -0.22
CDH11-216ENST00000569128 SNPHO15079 494 aa13.68□□□□□ -0.22
CDH11-216ENST00000569128 MAP2K5Q13163 448 aa13.68□□□□□ -0.22
CDH11-216ENST00000569128 NPDC1Q9NQX5 325 aaPredicted RBP13.67□□□□□ -0.22
CDH11-216ENST00000569128 ZDHHC16Q969W1 377 aa13.66□□□□□ -0.22
CDH11-216ENST00000569128 CCDC102AQ96A19 550 aa13.66□□□□□ -0.22
CDH11-216ENST00000569128 LHX6Q9UPM6 363 aa13.66□□□□□ -0.22
CDH11-216ENST00000569128 CCDC88BA6NC98 1476 aa13.66□□□□□ -0.22
CDH11-216ENST00000569128 IRF6O14896 467 aa13.65□□□□□ -0.22
CDH11-216ENST00000569128 LHX8Q68G74 356 aa13.63□□□□□ -0.23
CDH11-216ENST00000569128 ADAM33Q9BZ11 813 aa13.63□□□□□ -0.23
CDH11-216ENST00000569128 PDE4DQ08499 809 aa13.62□□□□□ -0.23
CDH11-216ENST00000569128 C6orf132Q5T0Z8 1188 aa13.62□□□□□ -0.23
CDH11-216ENST00000569128 GPBP1L1Q9HC44 474 aaPredicted RBP13.62□□□□□ -0.23
CDH11-216ENST00000569128 HOMEZQ8IX15 550 aa13.61□□□□□ -0.23
CDH11-216ENST00000569128 HOXB1P14653 301 aaPredicted RBP13.6□□□□□ -0.23
CDH11-216ENST00000569128 C14orf37Q86TY3 774 aa13.58□□□□□ -0.24
CDH11-216ENST00000569128 PPP4R3BQ5MIZ7 849 aa13.57□□□□□ -0.24
CDH11-216ENST00000569128 KDM4CQ9H3R0 1056 aa13.55□□□□□ -0.24
CDH11-216ENST00000569128 PSDA5PKW4 1024 aaPredicted RBP13.54□□□□□ -0.24
CDH11-216ENST00000569128 CERKQ8TCT0 537 aa13.53□□□□□ -0.24
CDH11-216ENST00000569128 AMHR2Q16671 573 aa13.52□□□□□ -0.25
CDH11-216ENST00000569128 PADI6Q6TGC4 694 aa13.52□□□□□ -0.25
CDH11-216ENST00000569128 BCL2L12Q9HB09 334 aa13.51□□□□□ -0.25
CDH11-216ENST00000569128 FAM161AQ3B820 660 aa13.5□□□□□ -0.25
CDH11-216ENST00000569128 COL9A1P20849 921 aa13.48□□□□□ -0.25
CDH11-216ENST00000569128 TTLL12Q14166 644 aaPredicted RBP13.48□□□□□ -0.25
CDH11-216ENST00000569128 PARP9Q8IXQ6 854 aa13.48□□□□□ -0.25
CDH11-216ENST00000569128 NESP48681 1621 aa13.48□□□□□ -0.25
CDH11-216ENST00000569128 PRSS12P56730 875 aa13.47□□□□□ -0.25
CDH11-216ENST00000569128 PTPREP23469 700 aa13.46□□□□□ -0.25
CDH11-216ENST00000569128 IL27Q8NEV9 243 aa13.46□□□□□ -0.25
CDH11-216ENST00000569128 CDCA7LQ96GN5 454 aa13.46□□□□□ -0.25
CDH11-216ENST00000569128 CADPSQ9ULU8 1353 aa13.45□□□□□ -0.26
CDH11-216ENST00000569128 TTC13Q8NBP0 860 aa13.45□□□□□ -0.26
CDH11-216ENST00000569128 PHOX2BQ99453 314 aa13.45□□□□□ -0.26
CDH11-216ENST00000569128 RBM27Q9P2N5 1060 aaKnown RBP13.45□□□□□ -0.26
CDH11-216ENST00000569128 ADGRG1Q9Y653 693 aa13.44□□□□□ -0.26
CDH11-216ENST00000569128 CFTRP13569 1480 aa13.43□□□□□ -0.26
CDH11-216ENST00000569128 PPP1R3GB7ZBB8 358 aa13.43□□□□□ -0.26
CDH11-216ENST00000569128 ST18O60284 1047 aa13.42□□□□□ -0.26
CDH11-216ENST00000569128 ERBB3P21860 1342 aa13.41□□□□□ -0.26
CDH11-216ENST00000569128 OATP04181 439 aa13.41□□□□□ -0.26
CDH11-216ENST00000569128 METTL3Q86U44 580 aaKnown RBP13.41□□□□□ -0.26
CDH11-216ENST00000569128 KCNK17Q96T54 332 aa13.41□□□□□ -0.26
CDH11-216ENST00000569128 REPIN1Q9BWE0 567 aaKnown RBP13.41□□□□□ -0.26
CDH11-216ENST00000569128 FAM117AQ9C073 453 aa13.41□□□□□ -0.26
CDH11-216ENST00000569128 FAM198AQ9UFP1 575 aa13.41□□□□□ -0.26
CDH11-216ENST00000569128 MDM2Q00987 491 aaPredicted RBP13.4□□□□□ -0.26
CDH11-216ENST00000569128 GIGYF2Q6Y7W6 1299 aaKnown RBP13.4□□□□□ -0.26
CDH11-216ENST00000569128 NLRP7Q8WX94 980 aa13.4□□□□□ -0.26
CDH11-216ENST00000569128 VARS2Q5ST30 1063 aaKnown RBP13.39□□□□□ -0.27
CDH11-216ENST00000569128 PXYLP1Q8TE99 480 aa13.38□□□□□ -0.27
CDH11-216ENST00000569128 MARVELD3Q96A59 401 aa13.38□□□□□ -0.27
CDH11-216ENST00000569128 TSKSQ9UJT2 592 aa13.38□□□□□ -0.27
CDH11-216ENST00000569128 LAMC3Q9Y6N6 1575 aa13.37□□□□□ -0.27
CDH11-216ENST00000569128 CLCN1P35523 988 aa13.36□□□□□ -0.27
CDH11-216ENST00000569128 EMP3P54852 163 aa13.36□□□□□ -0.27
CDH11-216ENST00000569128 RBM46Q8TBY0 533 aaKnown RBP13.35□□□□□ -0.27
CDH11-216ENST00000569128 KCNH8Q96L42 1107 aa13.35□□□□□ -0.27
CDH11-216ENST00000569128 TMUB1Q9BVT8 246 aa13.35□□□□□ -0.27
CDH11-216ENST00000569128 GPCPD1Q9NPB8 672 aa13.35□□□□□ -0.27
CDH11-216ENST00000569128 TRIM6-TRIM34B2RNG4 842 aa13.34□□□□□ -0.27
CDH11-216ENST00000569128 MS4A1P11836 297 aa13.34□□□□□ -0.27
CDH11-216ENST00000569128 PSEN2P49810 448 aa13.34□□□□□ -0.27
CDH11-216ENST00000569128 PROX2Q3B8N5 592 aa13.34□□□□□ -0.27
CDH11-216ENST00000569128 FAM163AQ96GL9 167 aaPredicted RBP13.34□□□□□ -0.27
CDH11-216ENST00000569128 PLEKHG3A1L390 1219 aa13.33□□□□□ -0.28
CDH11-216ENST00000569128 DDRGK1Q96HY6 314 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms