RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 TSR1Q2NL82 804 aaKnown RBP8.24□□□□□ -1.09
HMGB1P6-201ENST00000569046 DMRTA1Q5VZB9 504 aa8.24□□□□□ -1.09
HMGB1P6-201ENST00000569046 PBX2P40425 430 aa8.23□□□□□ -1.09
HMGB1P6-201ENST00000569046 C6orf132Q5T0Z8 1188 aa8.23□□□□□ -1.09
HMGB1P6-201ENST00000569046 MAP3K7O43318 606 aa8.22□□□□□ -1.09
HMGB1P6-201ENST00000569046 COL9A1P20849 921 aa8.22□□□□□ -1.09
HMGB1P6-201ENST00000569046 PTPREP23469 700 aa8.22□□□□□ -1.09
HMGB1P6-201ENST00000569046 CDHR5Q9HBB8 845 aa8.22□□□□□ -1.09
HMGB1P6-201ENST00000569046 LSM11P83369 360 aaKnown RBP eCLIP8.21□□□□□ -1.1
HMGB1P6-201ENST00000569046 PCDH10Q9P2E7 1040 aa8.21□□□□□ -1.1
HMGB1P6-201ENST00000569046 RBM26Q5T8P6 1007 aaKnown RBP8.2□□□□□ -1.1
HMGB1P6-201ENST00000569046 ANKRD13DQ6ZTN6 518 aa8.18□□□□□ -1.1
HMGB1P6-201ENST00000569046 NPDC1Q9NQX5 325 aaPredicted RBP8.18□□□□□ -1.1
HMGB1P6-201ENST00000569046 PPP1R3GB7ZBB8 358 aa8.17□□□□□ -1.1
HMGB1P6-201ENST00000569046 SMYD5Q6GMV2 418 aa8.17□□□□□ -1.1
HMGB1P6-201ENST00000569046 ZBED2Q9BTP6 218 aa8.17□□□□□ -1.1
HMGB1P6-201ENST00000569046 PROX2Q3B8N5 592 aa8.16□□□□□ -1.1
HMGB1P6-201ENST00000569046 NUTM2FA1L443 756 aa8.15□□□□□ -1.1
HMGB1P6-201ENST00000569046 ADGRD1Q6QNK2 874 aa8.15□□□□□ -1.1
HMGB1P6-201ENST00000569046 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.15□□□□□ -1.1
HMGB1P6-201ENST00000569046 KCNH8Q96L42 1107 aa8.15□□□□□ -1.1
HMGB1P6-201ENST00000569046 VPS9D1Q9Y2B5 631 aa8.15□□□□□ -1.1
HMGB1P6-201ENST00000569046 PTGDRQ13258 359 aa8.14□□□□□ -1.11
HMGB1P6-201ENST00000569046 GPR37O15354 613 aa8.13□□□□□ -1.11
HMGB1P6-201ENST00000569046 SLC4A5Q9BY07 1137 aa8.13□□□□□ -1.11
HMGB1P6-201ENST00000569046 FAM198AQ9UFP1 575 aa8.13□□□□□ -1.11
HMGB1P6-201ENST00000569046 TK2O00142 265 aa8.12□□□□□ -1.11
HMGB1P6-201ENST00000569046 HRO43593 1189 aa8.12□□□□□ -1.11
HMGB1P6-201ENST00000569046 SPNS2Q8IVW8 549 aa8.12□□□□□ -1.11
HMGB1P6-201ENST00000569046 BCANQ96GW7 911 aa8.12□□□□□ -1.11
HMGB1P6-201ENST00000569046 TSKSQ9UJT2 592 aa8.12□□□□□ -1.11
HMGB1P6-201ENST00000569046 PRSS12P56730 875 aa8.11□□□□□ -1.11
HMGB1P6-201ENST00000569046 CDCA7LQ96GN5 454 aa8.11□□□□□ -1.11
HMGB1P6-201ENST00000569046 TRIM6-TRIM34B2RNG4 842 aa8.1□□□□□ -1.11
HMGB1P6-201ENST00000569046 LMOD2Q6P5Q4 547 aa8.1□□□□□ -1.11
HMGB1P6-201ENST00000569046 CERKQ8TCT0 537 aa8.1□□□□□ -1.11
HMGB1P6-201ENST00000569046 BHMG1C9JSJ3 638 aaPredicted RBP8.09□□□□□ -1.11
HMGB1P6-201ENST00000569046 C3orf80F5H4A9 247 aa8.09□□□□□ -1.11
HMGB1P6-201ENST00000569046 PADI6Q6TGC4 694 aa8.09□□□□□ -1.11
HMGB1P6-201ENST00000569046 TULP1O00294 542 aaPredicted RBP8.08□□□□□ -1.12
HMGB1P6-201ENST00000569046 FCHSD2O94868 740 aa8.08□□□□□ -1.12
HMGB1P6-201ENST00000569046 FECHP22830 423 aa8.08□□□□□ -1.12
HMGB1P6-201ENST00000569046 GPIHBP1Q8IV16 184 aa8.08□□□□□ -1.12
HMGB1P6-201ENST00000569046 KIAA1468Q9P260 1216 aa8.08□□□□□ -1.12
HMGB1P6-201ENST00000569046 TTC13Q8NBP0 860 aa8.07□□□□□ -1.12
HMGB1P6-201ENST00000569046 RABGEF1Q9UJ41 708 aa8.07□□□□□ -1.12
HMGB1P6-201ENST00000569046 ONECUT3O60422 494 aaPredicted RBP8.06□□□□□ -1.12
HMGB1P6-201ENST00000569046 RBM27Q9P2N5 1060 aaKnown RBP8.06□□□□□ -1.12
HMGB1P6-201ENST00000569046 SEPT9Q9UHD8 586 aaPredicted RBP8.05□□□□□ -1.12
HMGB1P6-201ENST00000569046 SMAPO00193 183 aa8.04□□□□□ -1.12
HMGB1P6-201ENST00000569046 MMRN1Q13201 1228 aa8.04□□□□□ -1.12
HMGB1P6-201ENST00000569046 HIC1Q14526 733 aa8.04□□□□□ -1.12
HMGB1P6-201ENST00000569046 FAM161AQ3B820 660 aa8.04□□□□□ -1.12
HMGB1P6-201ENST00000569046 GNPATO15228 680 aa8.03□□□□□ -1.12
HMGB1P6-201ENST00000569046 NUDT18Q6ZVK8 323 aa8.02□□□□□ -1.13
HMGB1P6-201ENST00000569046 PACS2Q86VP3 889 aa8.02□□□□□ -1.13
HMGB1P6-201ENST00000569046 ZC3H15Q8WU90 426 aaKnown RBP8.02□□□□□ -1.13
HMGB1P6-201ENST00000569046 TATDN2Q93075 761 aa8.02□□□□□ -1.13
HMGB1P6-201ENST00000569046 PNMA3Q9UL41 463 aa8.02□□□□□ -1.13
HMGB1P6-201ENST00000569046 MYT1LQ9UL68 1186 aa8.02□□□□□ -1.13
HMGB1P6-201ENST00000569046 MRPL50Q8N5N7 158 aaKnown RBP8.01□□□□□ -1.13
HMGB1P6-201ENST00000569046 NBPF3Q9H094 633 aa8.01□□□□□ -1.13
HMGB1P6-201ENST00000569046 ADGRG1Q9Y653 693 aa8.01□□□□□ -1.13
HMGB1P6-201ENST00000569046 NBPF26B4DH59 902 aa7.99□□□□□ -1.13
HMGB1P6-201ENST00000569046 STAC3Q96MF2 364 aa7.99□□□□□ -1.13
HMGB1P6-201ENST00000569046 EYA1Q99502 592 aa7.99□□□□□ -1.13
HMGB1P6-201ENST00000569046 PLSCR2Q9NRY7 297 aa7.99□□□□□ -1.13
HMGB1P6-201ENST00000569046 ZMYND10O75800 440 aa7.98□□□□□ -1.13
HMGB1P6-201ENST00000569046 FAM98CQ17RN3 349 aaKnown RBP7.98□□□□□ -1.13
HMGB1P6-201ENST00000569046 LAPTM4BQ86VI4 370 aa7.98□□□□□ -1.13
HMGB1P6-201ENST00000569046 RNF166Q96A37 237 aaPredicted RBP7.97□□□□□ -1.13
HMGB1P6-201ENST00000569046 ZFRQ96KR1 1074 aaKnown RBP7.97□□□□□ -1.13
HMGB1P6-201ENST00000569046 KCTD12Q96CX2 325 aaKnown RBP7.96□□□□□ -1.14
HMGB1P6-201ENST00000569046 MAP2K5Q13163 448 aa7.95□□□□□ -1.14
HMGB1P6-201ENST00000569046 BARGINQ6ZT62 677 aa7.95□□□□□ -1.14
HMGB1P6-201ENST00000569046 PXYLP1Q8TE99 480 aa7.95□□□□□ -1.14
HMGB1P6-201ENST00000569046 WNT2BQ93097 391 aa7.95□□□□□ -1.14
HMGB1P6-201ENST00000569046 PHOX2BQ99453 314 aa7.95□□□□□ -1.14
HMGB1P6-201ENST00000569046 GOLGA8CPA6NN73 597 aa7.94□□□□□ -1.14
HMGB1P6-201ENST00000569046 METTL3Q86U44 580 aaKnown RBP7.94□□□□□ -1.14
HMGB1P6-201ENST00000569046 IRF6O14896 467 aa7.93□□□□□ -1.14
HMGB1P6-201ENST00000569046 BCAMP50895 628 aa7.93□□□□□ -1.14
HMGB1P6-201ENST00000569046 SAMD7Q7Z3H4 446 aa7.93□□□□□ -1.14
HMGB1P6-201ENST00000569046 RBM46Q8TBY0 533 aaKnown RBP7.93□□□□□ -1.14
HMGB1P6-201ENST00000569046 NLRP7Q8WX94 980 aa7.93□□□□□ -1.14
HMGB1P6-201ENST00000569046 RCCD1A6NED2 376 aa7.92□□□□□ -1.14
HMGB1P6-201ENST00000569046 OATP04181 439 aa7.92□□□□□ -1.14
HMGB1P6-201ENST00000569046 THSD4Q6ZMP0 1018 aa7.92□□□□□ -1.14
HMGB1P6-201ENST00000569046 CCDC102AQ96A19 550 aa7.92□□□□□ -1.14
HMGB1P6-201ENST00000569046 MINK1Q8N4C8 1332 aaPredicted RBP7.92□□□□□ -1.14
HMGB1P6-201ENST00000569046 SWT1Q5T5J6 900 aaKnown RBP7.91□□□□□ -1.14
HMGB1P6-201ENST00000569046 ANKK1Q8NFD2 765 aa7.91□□□□□ -1.14
HMGB1P6-201ENST00000569046 SOWAHBA6NEL2 793 aa7.9□□□□□ -1.14
HMGB1P6-201ENST00000569046 DNAJB2P25686 324 aa7.9□□□□□ -1.14
HMGB1P6-201ENST00000569046 PTPN5P54829 565 aa7.89□□□□□ -1.15
HMGB1P6-201ENST00000569046 KRI1Q8N9T8 703 aaKnown RBP7.89□□□□□ -1.15
HMGB1P6-201ENST00000569046 TMEM134Q9H6X4 195 aa7.89□□□□□ -1.15
HMGB1P6-201ENST00000569046 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.89□□□□□ -1.15
HMGB1P6-201ENST00000569046 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.88□□□□□ -1.15
HMGB1P6-201ENST00000569046 LRCH3Q96II8 777 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms