RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 TSR1Q2NL82 804 aaKnown RBP8.24□□□□□ -1.09
HMGB1P6-201ENST00000569046 DMRTA1Q5VZB9 504 aa8.24□□□□□ -1.09
HMGB1P6-201ENST00000569046 PBX2P40425 430 aa8.23□□□□□ -1.09
HMGB1P6-201ENST00000569046 C6orf132Q5T0Z8 1188 aa8.23□□□□□ -1.09
HMGB1P6-201ENST00000569046 MAP3K7O43318 606 aa8.22□□□□□ -1.09
HMGB1P6-201ENST00000569046 COL9A1P20849 921 aa8.22□□□□□ -1.09
HMGB1P6-201ENST00000569046 PTPREP23469 700 aa8.22□□□□□ -1.09
HMGB1P6-201ENST00000569046 CDHR5Q9HBB8 845 aa8.22□□□□□ -1.09
HMGB1P6-201ENST00000569046 LSM11P83369 360 aaKnown RBP eCLIP8.21□□□□□ -1.1
HMGB1P6-201ENST00000569046 PCDH10Q9P2E7 1040 aa8.21□□□□□ -1.1
HMGB1P6-201ENST00000569046 RBM26Q5T8P6 1007 aaKnown RBP8.2□□□□□ -1.1
HMGB1P6-201ENST00000569046 ANKRD13DQ6ZTN6 518 aa8.18□□□□□ -1.1
HMGB1P6-201ENST00000569046 NPDC1Q9NQX5 325 aaPredicted RBP8.18□□□□□ -1.1
HMGB1P6-201ENST00000569046 PPP1R3GB7ZBB8 358 aa8.17□□□□□ -1.1
HMGB1P6-201ENST00000569046 SMYD5Q6GMV2 418 aa8.17□□□□□ -1.1
HMGB1P6-201ENST00000569046 ZBED2Q9BTP6 218 aa8.17□□□□□ -1.1
HMGB1P6-201ENST00000569046 PROX2Q3B8N5 592 aa8.16□□□□□ -1.1
HMGB1P6-201ENST00000569046 NUTM2FA1L443 756 aa8.15□□□□□ -1.1
HMGB1P6-201ENST00000569046 ADGRD1Q6QNK2 874 aa8.15□□□□□ -1.1
HMGB1P6-201ENST00000569046 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.15□□□□□ -1.1
HMGB1P6-201ENST00000569046 KCNH8Q96L42 1107 aa8.15□□□□□ -1.1
HMGB1P6-201ENST00000569046 VPS9D1Q9Y2B5 631 aa8.15□□□□□ -1.1
HMGB1P6-201ENST00000569046 PTGDRQ13258 359 aa8.14□□□□□ -1.11
HMGB1P6-201ENST00000569046 GPR37O15354 613 aa8.13□□□□□ -1.11
HMGB1P6-201ENST00000569046 SLC4A5Q9BY07 1137 aa8.13□□□□□ -1.11
HMGB1P6-201ENST00000569046 FAM198AQ9UFP1 575 aa8.13□□□□□ -1.11
HMGB1P6-201ENST00000569046 TK2O00142 265 aa8.12□□□□□ -1.11
HMGB1P6-201ENST00000569046 HRO43593 1189 aa8.12□□□□□ -1.11
HMGB1P6-201ENST00000569046 SPNS2Q8IVW8 549 aa8.12□□□□□ -1.11
HMGB1P6-201ENST00000569046 BCANQ96GW7 911 aa8.12□□□□□ -1.11
HMGB1P6-201ENST00000569046 TSKSQ9UJT2 592 aa8.12□□□□□ -1.11
HMGB1P6-201ENST00000569046 PRSS12P56730 875 aa8.11□□□□□ -1.11
HMGB1P6-201ENST00000569046 CDCA7LQ96GN5 454 aa8.11□□□□□ -1.11
HMGB1P6-201ENST00000569046 TRIM6-TRIM34B2RNG4 842 aa8.1□□□□□ -1.11
HMGB1P6-201ENST00000569046 LMOD2Q6P5Q4 547 aa8.1□□□□□ -1.11
HMGB1P6-201ENST00000569046 CERKQ8TCT0 537 aa8.1□□□□□ -1.11
HMGB1P6-201ENST00000569046 BHMG1C9JSJ3 638 aaPredicted RBP8.09□□□□□ -1.11
HMGB1P6-201ENST00000569046 C3orf80F5H4A9 247 aa8.09□□□□□ -1.11
HMGB1P6-201ENST00000569046 PADI6Q6TGC4 694 aa8.09□□□□□ -1.11
HMGB1P6-201ENST00000569046 TULP1O00294 542 aaPredicted RBP8.08□□□□□ -1.12
HMGB1P6-201ENST00000569046 FCHSD2O94868 740 aa8.08□□□□□ -1.12
HMGB1P6-201ENST00000569046 FECHP22830 423 aa8.08□□□□□ -1.12
HMGB1P6-201ENST00000569046 GPIHBP1Q8IV16 184 aa8.08□□□□□ -1.12
HMGB1P6-201ENST00000569046 KIAA1468Q9P260 1216 aa8.08□□□□□ -1.12
HMGB1P6-201ENST00000569046 TTC13Q8NBP0 860 aa8.07□□□□□ -1.12
HMGB1P6-201ENST00000569046 RABGEF1Q9UJ41 708 aa8.07□□□□□ -1.12
HMGB1P6-201ENST00000569046 ONECUT3O60422 494 aaPredicted RBP8.06□□□□□ -1.12
HMGB1P6-201ENST00000569046 RBM27Q9P2N5 1060 aaKnown RBP8.06□□□□□ -1.12
HMGB1P6-201ENST00000569046 SEPT9Q9UHD8 586 aaPredicted RBP8.05□□□□□ -1.12
HMGB1P6-201ENST00000569046 SMAPO00193 183 aa8.04□□□□□ -1.12
HMGB1P6-201ENST00000569046 MMRN1Q13201 1228 aa8.04□□□□□ -1.12
HMGB1P6-201ENST00000569046 HIC1Q14526 733 aa8.04□□□□□ -1.12
HMGB1P6-201ENST00000569046 FAM161AQ3B820 660 aa8.04□□□□□ -1.12
HMGB1P6-201ENST00000569046 GNPATO15228 680 aa8.03□□□□□ -1.12
HMGB1P6-201ENST00000569046 NUDT18Q6ZVK8 323 aa8.02□□□□□ -1.13
HMGB1P6-201ENST00000569046 PACS2Q86VP3 889 aa8.02□□□□□ -1.13
HMGB1P6-201ENST00000569046 ZC3H15Q8WU90 426 aaKnown RBP8.02□□□□□ -1.13
HMGB1P6-201ENST00000569046 TATDN2Q93075 761 aa8.02□□□□□ -1.13
HMGB1P6-201ENST00000569046 PNMA3Q9UL41 463 aa8.02□□□□□ -1.13
HMGB1P6-201ENST00000569046 MYT1LQ9UL68 1186 aa8.02□□□□□ -1.13
HMGB1P6-201ENST00000569046 MRPL50Q8N5N7 158 aaKnown RBP8.01□□□□□ -1.13
HMGB1P6-201ENST00000569046 NBPF3Q9H094 633 aa8.01□□□□□ -1.13
HMGB1P6-201ENST00000569046 ADGRG1Q9Y653 693 aa8.01□□□□□ -1.13
HMGB1P6-201ENST00000569046 NBPF26B4DH59 902 aa7.99□□□□□ -1.13
HMGB1P6-201ENST00000569046 STAC3Q96MF2 364 aa7.99□□□□□ -1.13
HMGB1P6-201ENST00000569046 EYA1Q99502 592 aa7.99□□□□□ -1.13
HMGB1P6-201ENST00000569046 PLSCR2Q9NRY7 297 aa7.99□□□□□ -1.13
HMGB1P6-201ENST00000569046 ZMYND10O75800 440 aa7.98□□□□□ -1.13
HMGB1P6-201ENST00000569046 FAM98CQ17RN3 349 aaKnown RBP7.98□□□□□ -1.13
HMGB1P6-201ENST00000569046 LAPTM4BQ86VI4 370 aa7.98□□□□□ -1.13
HMGB1P6-201ENST00000569046 RNF166Q96A37 237 aaPredicted RBP7.97□□□□□ -1.13
HMGB1P6-201ENST00000569046 ZFRQ96KR1 1074 aaKnown RBP7.97□□□□□ -1.13
HMGB1P6-201ENST00000569046 KCTD12Q96CX2 325 aaKnown RBP7.96□□□□□ -1.14
HMGB1P6-201ENST00000569046 MAP2K5Q13163 448 aa7.95□□□□□ -1.14
HMGB1P6-201ENST00000569046 BARGINQ6ZT62 677 aa7.95□□□□□ -1.14
HMGB1P6-201ENST00000569046 PXYLP1Q8TE99 480 aa7.95□□□□□ -1.14
HMGB1P6-201ENST00000569046 WNT2BQ93097 391 aa7.95□□□□□ -1.14
HMGB1P6-201ENST00000569046 PHOX2BQ99453 314 aa7.95□□□□□ -1.14
HMGB1P6-201ENST00000569046 GOLGA8CPA6NN73 597 aa7.94□□□□□ -1.14
HMGB1P6-201ENST00000569046 METTL3Q86U44 580 aaKnown RBP7.94□□□□□ -1.14
HMGB1P6-201ENST00000569046 IRF6O14896 467 aa7.93□□□□□ -1.14
HMGB1P6-201ENST00000569046 BCAMP50895 628 aa7.93□□□□□ -1.14
HMGB1P6-201ENST00000569046 SAMD7Q7Z3H4 446 aa7.93□□□□□ -1.14
HMGB1P6-201ENST00000569046 RBM46Q8TBY0 533 aaKnown RBP7.93□□□□□ -1.14
HMGB1P6-201ENST00000569046 NLRP7Q8WX94 980 aa7.93□□□□□ -1.14
HMGB1P6-201ENST00000569046 RCCD1A6NED2 376 aa7.92□□□□□ -1.14
HMGB1P6-201ENST00000569046 OATP04181 439 aa7.92□□□□□ -1.14
HMGB1P6-201ENST00000569046 THSD4Q6ZMP0 1018 aa7.92□□□□□ -1.14
HMGB1P6-201ENST00000569046 CCDC102AQ96A19 550 aa7.92□□□□□ -1.14
HMGB1P6-201ENST00000569046 MINK1Q8N4C8 1332 aaPredicted RBP7.92□□□□□ -1.14
HMGB1P6-201ENST00000569046 SWT1Q5T5J6 900 aaKnown RBP7.91□□□□□ -1.14
HMGB1P6-201ENST00000569046 ANKK1Q8NFD2 765 aa7.91□□□□□ -1.14
HMGB1P6-201ENST00000569046 SOWAHBA6NEL2 793 aa7.9□□□□□ -1.14
HMGB1P6-201ENST00000569046 DNAJB2P25686 324 aa7.9□□□□□ -1.14
HMGB1P6-201ENST00000569046 PTPN5P54829 565 aa7.89□□□□□ -1.15
HMGB1P6-201ENST00000569046 KRI1Q8N9T8 703 aaKnown RBP7.89□□□□□ -1.15
HMGB1P6-201ENST00000569046 TMEM134Q9H6X4 195 aa7.89□□□□□ -1.15
HMGB1P6-201ENST00000569046 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.89□□□□□ -1.15
HMGB1P6-201ENST00000569046 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.88□□□□□ -1.15
HMGB1P6-201ENST00000569046 LRCH3Q96II8 777 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms