RNA–Protein interactions for RNA: ENST00000568993.5

SNX20-204, Transcript of sorting nexin 20, humanhuman

TSL 1 (best)

Gene SNX20, Length 2,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-204ENST00000568993 KDM5CP41229 1560 aa22.02■■□□□ 1.12
SNX20-204ENST00000568993 DHX29Q7Z478 1369 aaKnown RBP22.02■■□□□ 1.12
SNX20-204ENST00000568993 GLI2P10070 1586 aa22.01■■□□□ 1.11
SNX20-204ENST00000568993 PLA2R1Q13018 1463 aa22.01■■□□□ 1.11
SNX20-204ENST00000568993 UHRF1BP1Q6BDS2 1440 aa22■■□□□ 1.11
SNX20-204ENST00000568993 POGZQ7Z3K3 1410 aa22■■□□□ 1.11
SNX20-204ENST00000568993 EIF4G2P78344 907 aaKnown RBP eCLIP21.99■■□□□ 1.11
SNX20-204ENST00000568993 HIRIP3Q9BW71 556 aaPredicted RBP21.99■■□□□ 1.11
SNX20-204ENST00000568993 MAP3K4Q9Y6R4 1608 aa21.99■■□□□ 1.11
SNX20-204ENST00000568993 MLH3Q9UHC1 1453 aa21.98■■□□□ 1.11
SNX20-204ENST00000568993 HSPA5P11021 654 aaKnown RBP21.97■■□□□ 1.11
SNX20-204ENST00000568993 VWDEQ8N2E2 1590 aa21.97■■□□□ 1.11
SNX20-204ENST00000568993 CCDC144AA2RUR9 1427 aa21.97■■□□□ 1.11
SNX20-204ENST00000568993 DDX10Q13206 875 aaKnown RBP21.95■■□□□ 1.1
SNX20-204ENST00000568993 SPATA31E1Q6ZUB1 1445 aa21.94■■□□□ 1.1
SNX20-204ENST00000568993 PRDM15P57071 1507 aaPredicted RBP21.93■■□□□ 1.1
SNX20-204ENST00000568993 HECW2Q9P2P5 1572 aa21.92■■□□□ 1.1
SNX20-204ENST00000568993 E9PCH4 1651 aa21.92■■□□□ 1.1
SNX20-204ENST00000568993 TET3O43151 1660 aa21.92■■□□□ 1.1
SNX20-204ENST00000568993 MYT1LQ9UL68 1186 aa21.91■■□□□ 1.1
SNX20-204ENST00000568993 MROH1Q8NDA8 1641 aa21.91■■□□□ 1.1
SNX20-204ENST00000568993 KANK1Q14678 1352 aa21.91■■□□□ 1.1
SNX20-204ENST00000568993 A2MP01023 1474 aa21.9■■□□□ 1.1
SNX20-204ENST00000568993 RALGAPBQ86X10 1494 aa21.9■■□□□ 1.1
SNX20-204ENST00000568993 KIF3BO15066 747 aa21.89■■□□□ 1.1
SNX20-204ENST00000568993 PTPRTO14522 1441 aa21.89■■□□□ 1.09
SNX20-204ENST00000568993 RNF17Q9BXT8 1623 aaKnown RBP21.88■■□□□ 1.09
SNX20-204ENST00000568993 BCORL1Q5H9F3 1711 aa21.87■■□□□ 1.09
SNX20-204ENST00000568993 DIP2BQ9P265 1576 aa21.87■■□□□ 1.09
SNX20-204ENST00000568993 TRPM2O94759 1503 aa21.86■■□□□ 1.09
SNX20-204ENST00000568993 FRMPD1Q5SYB0 1578 aa21.85■■□□□ 1.09
SNX20-204ENST00000568993 RICTORQ6R327 1708 aa21.85■■□□□ 1.09
SNX20-204ENST00000568993 DCAF11Q8TEB1 546 aa21.85■■□□□ 1.09
SNX20-204ENST00000568993 CENPBP07199 599 aaPredicted RBP21.84■■□□□ 1.09
SNX20-204ENST00000568993 WASHC2AQ641Q2 1341 aa21.84■■□□□ 1.09
SNX20-204ENST00000568993 LMTK2Q8IWU2 1503 aa21.84■■□□□ 1.09
SNX20-204ENST00000568993 SPHKAPQ2M3C7 1700 aa21.84■■□□□ 1.09
SNX20-204ENST00000568993 ABCA6Q8N139 1617 aa21.83■■□□□ 1.09
SNX20-204ENST00000568993 POLR1AO95602 1720 aaPredicted RBP21.82■■□□□ 1.08
SNX20-204ENST00000568993 PRAG1Q86YV5 1406 aa21.81■■□□□ 1.08
SNX20-204ENST00000568993 ZNF326Q5BKZ1 582 aaKnown RBP21.8■■□□□ 1.08
SNX20-204ENST00000568993 RAPGEF3O95398 923 aa21.8■■□□□ 1.08
SNX20-204ENST00000568993 FAM69CQ0P6D2 419 aa21.8■■□□□ 1.08
SNX20-204ENST00000568993 KDM2AQ9Y2K7 1162 aa21.79■■□□□ 1.08
SNX20-204ENST00000568993 USP47Q96K76 1375 aa21.79■■□□□ 1.08
SNX20-204ENST00000568993 EFCAB6Q5THR3 1501 aa21.79■■□□□ 1.08
SNX20-204ENST00000568993 CCDC7Q96M83 1385 aa21.78■■□□□ 1.08
SNX20-204ENST00000568993 CEP152O94986 1710 aa21.78■■□□□ 1.08
SNX20-204ENST00000568993 NEURL4Q96JN8 1562 aa21.77■■□□□ 1.08
SNX20-204ENST00000568993 DIP2CQ9Y2E4 1556 aa21.77■■□□□ 1.08
SNX20-204ENST00000568993 TRPM1Q7Z4N2 1603 aa21.77■■□□□ 1.08
SNX20-204ENST00000568993 C11orf95C9JLR9 678 aaPredicted RBP21.77■■□□□ 1.07
SNX20-204ENST00000568993 PPRC1Q5VV67 1664 aaKnown RBP21.76■■□□□ 1.07
SNX20-204ENST00000568993 RGL3Q3MIN7 710 aa21.75■■□□□ 1.07
SNX20-204ENST00000568993 CLTCL1P53675 1640 aa21.75■■□□□ 1.07
SNX20-204ENST00000568993 STAC3Q96MF2 364 aa21.74■■□□□ 1.07
SNX20-204ENST00000568993 ZMYM4Q5VZL5 1548 aa21.74■■□□□ 1.07
SNX20-204ENST00000568993 ANP32CO43423 234 aa21.73■■□□□ 1.07
SNX20-204ENST00000568993 CARD11Q9BXL7 1154 aa21.73■■□□□ 1.07
SNX20-204ENST00000568993 GPRASP1Q5JY77 1395 aa21.73■■□□□ 1.07
SNX20-204ENST00000568993 LAMC1P11047 1609 aa21.72■■□□□ 1.07
SNX20-204ENST00000568993 ARID4BQ4LE39 1312 aaPredicted RBP21.72■■□□□ 1.07
SNX20-204ENST00000568993 YTHDC1Q96MU7 727 aaKnown RBP21.72■■□□□ 1.07
SNX20-204ENST00000568993 CCER2I3L3R5 266 aa21.71■■□□□ 1.07
SNX20-204ENST00000568993 CNTLNQ9NXG0 1405 aa21.71■■□□□ 1.07
SNX20-204ENST00000568993 KIF7Q2M1P5 1343 aa21.7■■□□□ 1.06
SNX20-204ENST00000568993 ROCK2O75116 1388 aaKnown RBP21.7■■□□□ 1.06
SNX20-204ENST00000568993 TSPOAP1O95153 1857 aa21.67■■□□□ 1.06
SNX20-204ENST00000568993 ABCC3O15438 1527 aa21.67■■□□□ 1.06
SNX20-204ENST00000568993 YEATS2Q9ULM3 1422 aa21.67■■□□□ 1.06
SNX20-204ENST00000568993 KIF13AQ9H1H9 1805 aa21.66■■□□□ 1.06
SNX20-204ENST00000568993 GGT6Q6P531 493 aa21.65■■□□□ 1.06
SNX20-204ENST00000568993 NPATQ14207 1427 aa21.64■■□□□ 1.06
SNX20-204ENST00000568993 MADDQ8WXG6 1647 aa21.64■■□□□ 1.05
SNX20-204ENST00000568993 KIF1BO60333 1816 aa21.64■■□□□ 1.05
SNX20-204ENST00000568993 ZC3H13Q5T200 1668 aaKnown RBP21.62■■□□□ 1.05
SNX20-204ENST00000568993 WASHC2CQ9Y4E1 1318 aa21.62■■□□□ 1.05
SNX20-204ENST00000568993 NBPF1Q3BBV0 1214 aa21.62■■□□□ 1.05
SNX20-204ENST00000568993 ST20-MTHFSA0A0A6YYL1 179 aa21.62■■□□□ 1.05
SNX20-204ENST00000568993 CAMSAP1Q5T5Y3 1602 aa21.61■■□□□ 1.05
SNX20-204ENST00000568993 REREQ9P2R6 1566 aa21.61■■□□□ 1.05
SNX20-204ENST00000568993 ARHGAP31Q2M1Z3 1444 aa21.6■■□□□ 1.05
SNX20-204ENST00000568993 UGGT1Q9NYU2 1555 aa21.6■■□□□ 1.05
SNX20-204ENST00000568993 MYOM2P54296 1465 aa21.57■■□□□ 1.04
SNX20-204ENST00000568993 NOS1P29475 1434 aa21.57■■□□□ 1.04
SNX20-204ENST00000568993 KIAA1210Q9ULL0 1709 aa21.57■■□□□ 1.04
SNX20-204ENST00000568993 IFT172Q9UG01 1749 aa21.57■■□□□ 1.04
SNX20-204ENST00000568993 ADGRB3O60242 1522 aa21.56■■□□□ 1.04
SNX20-204ENST00000568993 AGLP35573 1532 aa21.56■■□□□ 1.04
SNX20-204ENST00000568993 MROH2AA6NES4 1674 aa21.54■■□□□ 1.04
SNX20-204ENST00000568993 SIGLEC1Q9BZZ2 1709 aa21.53■■□□□ 1.04
SNX20-204ENST00000568993 CFAP65Q6ZU64 1925 aaKnown RBP21.53■■□□□ 1.04
SNX20-204ENST00000568993 PIK3C2BO00750 1634 aa21.52■■□□□ 1.04
SNX20-204ENST00000568993 NRXN1Q9ULB1 1477 aa21.51■■□□□ 1.03
SNX20-204ENST00000568993 IQGAP1P46940 1657 aa21.51■■□□□ 1.03
SNX20-204ENST00000568993 SCAF1Q9H7N4 1312 aaKnown RBP21.51■■□□□ 1.03
SNX20-204ENST00000568993 PRKRIP1Q9H875 184 aaPredicted RBP21.5■■□□□ 1.03
SNX20-204ENST00000568993 PPP6R1Q9UPN7 881 aa21.5■■□□□ 1.03
SNX20-204ENST00000568993 COL17A1Q9UMD9 1497 aaPredicted RBP21.5■■□□□ 1.03
SNX20-204ENST00000568993 TESK2Q96S53 571 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms