RNA–Protein interactions for RNA: ENST00000568744.1

CYLD-213, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-213ENST00000568744 AK7Q96M32 723 aa12.54□□□□□ -0.4
CYLD-213ENST00000568744 PPP4R3BQ5MIZ7 849 aa12.53□□□□□ -0.4
CYLD-213ENST00000568744 PCDH10Q9P2E7 1040 aa12.52□□□□□ -0.41
CYLD-213ENST00000568744 FECHP22830 423 aa12.51□□□□□ -0.41
CYLD-213ENST00000568744 C6orf132Q5T0Z8 1188 aa12.51□□□□□ -0.41
CYLD-213ENST00000568744 ADAM33Q9BZ11 813 aa12.51□□□□□ -0.41
CYLD-213ENST00000568744 NEUROD2Q15784 382 aa12.5□□□□□ -0.41
CYLD-213ENST00000568744 PSDA5PKW4 1024 aaPredicted RBP12.49□□□□□ -0.41
CYLD-213ENST00000568744 MAP2K5Q13163 448 aa12.49□□□□□ -0.41
CYLD-213ENST00000568744 MINK1Q8N4C8 1332 aaPredicted RBP12.48□□□□□ -0.41
CYLD-213ENST00000568744 NPDC1Q9NQX5 325 aaPredicted RBP12.47□□□□□ -0.41
CYLD-213ENST00000568744 IRF6O14896 467 aa12.45□□□□□ -0.42
CYLD-213ENST00000568744 BRPF1P55201 1214 aaPredicted RBP12.45□□□□□ -0.42
CYLD-213ENST00000568744 CCDC102AQ96A19 550 aa12.45□□□□□ -0.42
CYLD-213ENST00000568744 ERBB3P21860 1342 aa12.43□□□□□ -0.42
CYLD-213ENST00000568744 TRIM66O15016 1216 aa12.43□□□□□ -0.42
CYLD-213ENST00000568744 ST18O60284 1047 aa12.43□□□□□ -0.42
CYLD-213ENST00000568744 FAM163AQ96GL9 167 aaPredicted RBP12.43□□□□□ -0.42
CYLD-213ENST00000568744 CERKQ8TCT0 537 aa12.42□□□□□ -0.42
CYLD-213ENST00000568744 PTPREP23469 700 aa12.41□□□□□ -0.42
CYLD-213ENST00000568744 EMP3P54852 163 aa12.41□□□□□ -0.42
CYLD-213ENST00000568744 PADI6Q6TGC4 694 aa12.4□□□□□ -0.42
CYLD-213ENST00000568744 MARVELD3Q96A59 401 aa12.4□□□□□ -0.42
CYLD-213ENST00000568744 BCL2L12Q9HB09 334 aa12.4□□□□□ -0.42
CYLD-213ENST00000568744 PDE4DQ08499 809 aa12.39□□□□□ -0.43
CYLD-213ENST00000568744 VARS2Q5ST30 1063 aaKnown RBP12.39□□□□□ -0.43
CYLD-213ENST00000568744 KCNH8Q96L42 1107 aa12.38□□□□□ -0.43
CYLD-213ENST00000568744 KCNK17Q96T54 332 aa12.38□□□□□ -0.43
CYLD-213ENST00000568744 COL9A1P20849 921 aa12.37□□□□□ -0.43
CYLD-213ENST00000568744 FAM161AQ3B820 660 aa12.37□□□□□ -0.43
CYLD-213ENST00000568744 GPBP1L1Q9HC44 474 aaPredicted RBP12.37□□□□□ -0.43
CYLD-213ENST00000568744 PRSS12P56730 875 aa12.36□□□□□ -0.43
CYLD-213ENST00000568744 CDCA7LQ96GN5 454 aa12.36□□□□□ -0.43
CYLD-213ENST00000568744 LCE2DQ5TA82 110 aaPredicted RBP12.35□□□□□ -0.43
CYLD-213ENST00000568744 FAM205CA6NFA0 338 aa12.34□□□□□ -0.43
CYLD-213ENST00000568744 PPP1R3GB7ZBB8 358 aa12.34□□□□□ -0.43
CYLD-213ENST00000568744 TTLL12Q14166 644 aaPredicted RBP12.33□□□□□ -0.44
CYLD-213ENST00000568744 KDM4CQ9H3R0 1056 aa12.31□□□□□ -0.44
CYLD-213ENST00000568744 RBM27Q9P2N5 1060 aaKnown RBP12.31□□□□□ -0.44
CYLD-213ENST00000568744 OATP04181 439 aa12.29□□□□□ -0.44
CYLD-213ENST00000568744 PSEN2P49810 448 aa12.29□□□□□ -0.44
CYLD-213ENST00000568744 ADGRG1Q9Y653 693 aa12.29□□□□□ -0.44
CYLD-213ENST00000568744 AMHR2Q16671 573 aa12.28□□□□□ -0.44
CYLD-213ENST00000568744 AXIN2Q9Y2T1 843 aa12.28□□□□□ -0.44
CYLD-213ENST00000568744 TMEM132AQ24JP5 1023 aa12.27□□□□□ -0.45
CYLD-213ENST00000568744 PROX2Q3B8N5 592 aa12.27□□□□□ -0.45
CYLD-213ENST00000568744 TTC13Q8NBP0 860 aa12.27□□□□□ -0.45
CYLD-213ENST00000568744 FAM198AQ9UFP1 575 aa12.27□□□□□ -0.45
CYLD-213ENST00000568744 TSKSQ9UJT2 592 aa12.27□□□□□ -0.45
CYLD-213ENST00000568744 MDM2Q00987 491 aaPredicted RBP12.26□□□□□ -0.45
CYLD-213ENST00000568744 PARP9Q8IXQ6 854 aa12.26□□□□□ -0.45
CYLD-213ENST00000568744 RBM46Q8TBY0 533 aaKnown RBP12.26□□□□□ -0.45
CYLD-213ENST00000568744 NLRP7Q8WX94 980 aa12.26□□□□□ -0.45
CYLD-213ENST00000568744 TRIM6-TRIM34B2RNG4 842 aa12.25□□□□□ -0.45
CYLD-213ENST00000568744 ARHGAP33O14559 1287 aa12.25□□□□□ -0.45
CYLD-213ENST00000568744 METTL3Q86U44 580 aaKnown RBP12.25□□□□□ -0.45
CYLD-213ENST00000568744 PACS2Q86VP3 889 aa12.25□□□□□ -0.45
CYLD-213ENST00000568744 PNMA3Q9UL41 463 aa12.25□□□□□ -0.45
CYLD-213ENST00000568744 IL27Q8NEV9 243 aa12.24□□□□□ -0.45
CYLD-213ENST00000568744 HS3ST6Q96QI5 342 aa12.24□□□□□ -0.45
CYLD-213ENST00000568744 PHOX2BQ99453 314 aa12.24□□□□□ -0.45
CYLD-213ENST00000568744 NBPF26B4DH59 902 aa12.23□□□□□ -0.45
CYLD-213ENST00000568744 NUDT18Q6ZVK8 323 aa12.23□□□□□ -0.45
CYLD-213ENST00000568744 PXYLP1Q8TE99 480 aa12.23□□□□□ -0.45
CYLD-213ENST00000568744 CLCN1P35523 988 aa12.22□□□□□ -0.45
CYLD-213ENST00000568744 GIGYF2Q6Y7W6 1299 aaKnown RBP12.22□□□□□ -0.45
CYLD-213ENST00000568744 DMRTA1Q5VZB9 504 aa12.21□□□□□ -0.45
CYLD-213ENST00000568744 POTEEQ6S8J3 1075 aa12.21□□□□□ -0.45
CYLD-213ENST00000568744 ZNF687Q8N1G0 1237 aa12.21□□□□□ -0.45
CYLD-213ENST00000568744 ZBED2Q9BTP6 218 aa12.21□□□□□ -0.45
CYLD-213ENST00000568744 SMAPO00193 183 aa12.2□□□□□ -0.46
CYLD-213ENST00000568744 PBX2P40425 430 aa12.2□□□□□ -0.46
CYLD-213ENST00000568744 TATDN2Q93075 761 aa12.2□□□□□ -0.46
CYLD-213ENST00000568744 GPCPD1Q9NPB8 672 aa12.2□□□□□ -0.46
CYLD-213ENST00000568744 KIAA1468Q9P260 1216 aa12.2□□□□□ -0.46
CYLD-213ENST00000568744 REPIN1Q9BWE0 567 aaKnown RBP12.19□□□□□ -0.46
CYLD-213ENST00000568744 C3orf80F5H4A9 247 aa12.18□□□□□ -0.46
CYLD-213ENST00000568744 FAM117AQ9C073 453 aa12.18□□□□□ -0.46
CYLD-213ENST00000568744 POTEB3A0JP26 581 aa12.17□□□□□ -0.46
CYLD-213ENST00000568744 RCCD1A6NED2 376 aa12.17□□□□□ -0.46
CYLD-213ENST00000568744 POTEBQ6S5H4 581 aa12.17□□□□□ -0.46
CYLD-213ENST00000568744 EYA1Q99502 592 aa12.17□□□□□ -0.46
CYLD-213ENST00000568744 ONECUT3O60422 494 aaPredicted RBP12.16□□□□□ -0.46
CYLD-213ENST00000568744 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.15□□□□□ -0.46
CYLD-213ENST00000568744 DAXXQ9UER7 740 aaPredicted RBP12.15□□□□□ -0.46
CYLD-213ENST00000568744 SSTR3P32745 418 aaPredicted RBP12.14□□□□□ -0.47
CYLD-213ENST00000568744 DDRGK1Q96HY6 314 aa12.14□□□□□ -0.47
CYLD-213ENST00000568744 SEPT9Q9UHD8 586 aaPredicted RBP12.14□□□□□ -0.47
CYLD-213ENST00000568744 MS4A1P11836 297 aa12.13□□□□□ -0.47
CYLD-213ENST00000568744 DNAJB2P25686 324 aa12.13□□□□□ -0.47
CYLD-213ENST00000568744 RABGEF1Q9UJ41 708 aa12.13□□□□□ -0.47
CYLD-213ENST00000568744 TMUB1Q9BVT8 246 aa12.11□□□□□ -0.47
CYLD-213ENST00000568744 SLC4A5Q9BY07 1137 aa12.11□□□□□ -0.47
CYLD-213ENST00000568744 VPS9D1Q9Y2B5 631 aa12.11□□□□□ -0.47
CYLD-213ENST00000568744 FAM217BQ9NTX9 383 aaPredicted RBP12.1□□□□□ -0.47
CYLD-213ENST00000568744 CDAN1Q8IWY9 1227 aa12.09□□□□□ -0.47
CYLD-213ENST00000568744 LSM11P83369 360 aaKnown RBP eCLIP12.08□□□□□ -0.48
CYLD-213ENST00000568744 GTF3C3Q9Y5Q9 886 aa12.08□□□□□ -0.48
CYLD-213ENST00000568744 PLEKHG3A1L390 1219 aa12.07□□□□□ -0.48
CYLD-213ENST00000568744 DDX11L8A8MPP1 907 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms