RNA–Protein interactions for RNA: ENST00000568740.5

TCF4-241, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-241ENST00000568740 UHRF1BP1LA0JNW5 1464 aa12.15□□□□□ -0.47
TCF4-241ENST00000568740 TRHP20396 242 aaPredicted RBP12.14□□□□□ -0.47
TCF4-241ENST00000568740 GCC2Q8IWJ2 1684 aa12.14□□□□□ -0.47
TCF4-241ENST00000568740 WDR7Q9Y4E6 1490 aa12.14□□□□□ -0.47
TCF4-241ENST00000568740 CCDC141Q6ZP82 1450 aa12.13□□□□□ -0.47
TCF4-241ENST00000568740 RGL3Q3MIN7 710 aa12.13□□□□□ -0.47
TCF4-241ENST00000568740 ANKRD30BQ9BXX2 1392 aa12.12□□□□□ -0.47
TCF4-241ENST00000568740 NBPF8Q3BBV2 869 aa12.12□□□□□ -0.47
TCF4-241ENST00000568740 PZPP20742 1482 aa12.12□□□□□ -0.47
TCF4-241ENST00000568740 PREX2Q70Z35 1606 aa12.12□□□□□ -0.47
TCF4-241ENST00000568740 SPAG9O60271 1321 aaKnown RBP12.11□□□□□ -0.47
TCF4-241ENST00000568740 RAPGEF3O95398 923 aa12.11□□□□□ -0.47
TCF4-241ENST00000568740 PLEKHH2Q8IVE3 1493 aa12.11□□□□□ -0.47
TCF4-241ENST00000568740 SCAPERQ9BY12 1400 aa12.09□□□□□ -0.47
TCF4-241ENST00000568740 RSPH4AQ5TD94 716 aa12.09□□□□□ -0.47
TCF4-241ENST00000568740 ARID3AQ99856 593 aa12.09□□□□□ -0.47
TCF4-241ENST00000568740 CHMP4AQ9BY43 222 aa12.09□□□□□ -0.47
TCF4-241ENST00000568740 CCDC9Q9Y3X0 531 aaKnown RBP12.09□□□□□ -0.47
TCF4-241ENST00000568740 FANCAO15360 1455 aa12.09□□□□□ -0.47
TCF4-241ENST00000568740 ADGRL2O95490 1459 aa12.09□□□□□ -0.47
TCF4-241ENST00000568740 CNGB1Q14028 1251 aaPredicted RBP12.08□□□□□ -0.48
TCF4-241ENST00000568740 KIF3BO15066 747 aa12.07□□□□□ -0.48
TCF4-241ENST00000568740 MYO5CQ9NQX4 1742 aa12.07□□□□□ -0.48
TCF4-241ENST00000568740 ACIN1Q9UKV3 1341 aaKnown RBP12.07□□□□□ -0.48
TCF4-241ENST00000568740 CROCC2H7BZ55 1655 aa12.06□□□□□ -0.48
TCF4-241ENST00000568740 HSPA5P11021 654 aaKnown RBP12.06□□□□□ -0.48
TCF4-241ENST00000568740 FAM69CQ0P6D2 419 aa12.06□□□□□ -0.48
TCF4-241ENST00000568740 CD109Q6YHK3 1445 aa12.06□□□□□ -0.48
TCF4-241ENST00000568740 DCAF11Q8TEB1 546 aa12.06□□□□□ -0.48
TCF4-241ENST00000568740 POLR3GLQ9BT43 218 aa12.05□□□□□ -0.48
TCF4-241ENST00000568740 KIAA1107Q9UPP5 1409 aa12.04□□□□□ -0.48
TCF4-241ENST00000568740 ADGRL1O94910 1474 aa12.04□□□□□ -0.48
TCF4-241ENST00000568740 CDK11BP21127 795 aaKnown RBP12.04□□□□□ -0.48
TCF4-241ENST00000568740 ADGBQ8N7X0 1667 aa12.04□□□□□ -0.48
TCF4-241ENST00000568740 SHANK2Q9UPX8 1470 aa12.04□□□□□ -0.48
TCF4-241ENST00000568740 SPRYD3Q8NCJ5 442 aa12.04□□□□□ -0.48
TCF4-241ENST00000568740 ARHGEF5Q12774 1597 aa12.03□□□□□ -0.48
TCF4-241ENST00000568740 GGT6Q6P531 493 aa12.03□□□□□ -0.48
TCF4-241ENST00000568740 C11orf95C9JLR9 678 aaPredicted RBP12.03□□□□□ -0.48
TCF4-241ENST00000568740 ABCC1P33527 1531 aa12.01□□□□□ -0.49
TCF4-241ENST00000568740 RPRD2Q5VT52 1461 aaKnown RBP12.01□□□□□ -0.49
TCF4-241ENST00000568740 DNAJC5Q9H3Z4 198 aa12.01□□□□□ -0.49
TCF4-241ENST00000568740 IFNLR1Q8IU57 520 aaPredicted RBP12.01□□□□□ -0.49
TCF4-241ENST00000568740 BRPF1P55201 1214 aaPredicted RBP12□□□□□ -0.49
TCF4-241ENST00000568740 SAMD1Q6SPF0 538 aaPredicted RBP11.99□□□□□ -0.49
TCF4-241ENST00000568740 FAM135AQ9P2D6 1515 aa11.99□□□□□ -0.49
TCF4-241ENST00000568740 EIF4G2P78344 907 aaKnown RBP eCLIP11.99□□□□□ -0.492e-7■■■■■ 31.9
TCF4-241ENST00000568740 RIMBP3CA6NJZ7 1639 aa11.98□□□□□ -0.49
TCF4-241ENST00000568740 RIMBP3BA6NNM3 1639 aa11.98□□□□□ -0.49
TCF4-241ENST00000568740 RIMBP3Q9UFD9 1639 aa11.98□□□□□ -0.49
TCF4-241ENST00000568740 PDIA4P13667 645 aaKnown RBP11.98□□□□□ -0.49
TCF4-241ENST00000568740 NECTIN2Q92692 538 aa11.97□□□□□ -0.49
TCF4-241ENST00000568740 TEX14Q8IWB6 1497 aa11.97□□□□□ -0.49
TCF4-241ENST00000568740 ABCA9Q8IUA7 1624 aa11.96□□□□□ -0.49
TCF4-241ENST00000568740 NBPF1Q3BBV0 1214 aa11.96□□□□□ -0.5
TCF4-241ENST00000568740 WASHC2AQ641Q2 1341 aa11.96□□□□□ -0.5
TCF4-241ENST00000568740 PLA2R1Q13018 1463 aa11.95□□□□□ -0.5
TCF4-241ENST00000568740 CHGAP10645 457 aaKnown RBP11.94□□□□□ -0.5
TCF4-241ENST00000568740 CCDC144AA2RUR9 1427 aa11.94□□□□□ -0.5
TCF4-241ENST00000568740 CNKSR2Q8WXI2 1034 aa11.93□□□□□ -0.5
TCF4-241ENST00000568740 CARD11Q9BXL7 1154 aa11.93□□□□□ -0.5
TCF4-241ENST00000568740 ZFYVE16Q7Z3T8 1539 aa11.93□□□□□ -0.5
TCF4-241ENST00000568740 DUOX2Q9NRD8 1548 aa11.93□□□□□ -0.5
TCF4-241ENST00000568740 MLECQ14165 292 aa11.92□□□□□ -0.5
TCF4-241ENST00000568740 NUTM2DQ5VT03 806 aaPredicted RBP11.92□□□□□ -0.5
TCF4-241ENST00000568740 ATP7AQ04656 1500 aa11.92□□□□□ -0.5
TCF4-241ENST00000568740 ZBTB7CA1YPR0 619 aa11.91□□□□□ -0.5
TCF4-241ENST00000568740 VASPP50552 380 aaPredicted RBP11.91□□□□□ -0.5
TCF4-241ENST00000568740 DHX29Q7Z478 1369 aaKnown RBP11.91□□□□□ -0.5
TCF4-241ENST00000568740 CENPBP07199 599 aaPredicted RBP11.9□□□□□ -0.5
TCF4-241ENST00000568740 C1orf115Q9H7X2 142 aa11.9□□□□□ -0.5
TCF4-241ENST00000568740 MAST1Q9Y2H9 1570 aa11.9□□□□□ -0.5
TCF4-241ENST00000568740 ST20-MTHFSA0A0A6YYL1 179 aa11.9□□□□□ -0.5
TCF4-241ENST00000568740 ERBINQ96RT1 1412 aa11.9□□□□□ -0.5
TCF4-241ENST00000568740 TSPOAP1O95153 1857 aa11.89□□□□□ -0.51
TCF4-241ENST00000568740 PLXNC1O60486 1568 aa11.89□□□□□ -0.51
TCF4-241ENST00000568740 RTEL1-TNFRSF6BF6WH68 1400 aa11.89□□□□□ -0.51
TCF4-241ENST00000568740 YEATS2Q9ULM3 1422 aa11.89□□□□□ -0.51
TCF4-241ENST00000568740 WASHC2CQ9Y4E1 1318 aa11.89□□□□□ -0.51
TCF4-241ENST00000568740 ZNF518AQ6AHZ1 1483 aa11.88□□□□□ -0.51
TCF4-241ENST00000568740 DHX37Q8IY37 1157 aaKnown RBP11.88□□□□□ -0.51
TCF4-241ENST00000568740 POGZQ7Z3K3 1410 aa11.88□□□□□ -0.51
TCF4-241ENST00000568740 USP47Q96K76 1375 aa11.87□□□□□ -0.51
TCF4-241ENST00000568740 CFAP65Q6ZU64 1925 aaKnown RBP11.87□□□□□ -0.51
TCF4-241ENST00000568740 SENP3-EIF4A1A0A087X0R7 540 aa11.87□□□□□ -0.51
TCF4-241ENST00000568740 KIF7Q2M1P5 1343 aa11.87□□□□□ -0.51
TCF4-241ENST00000568740 ANP32CO43423 234 aa11.87□□□□□ -0.51
TCF4-241ENST00000568740 HSP90B1P14625 803 aaKnown RBP11.87□□□□□ -0.51
TCF4-241ENST00000568740 ARAP3Q8WWN8 1544 aa11.87□□□□□ -0.51
TCF4-241ENST00000568740 KDM5DQ9BY66 1539 aa11.87□□□□□ -0.51
TCF4-241ENST00000568740 UGGT1Q9NYU2 1555 aa11.86□□□□□ -0.51
TCF4-241ENST00000568740 ROCK2O75116 1388 aaKnown RBP11.86□□□□□ -0.51
TCF4-241ENST00000568740 KANK1Q14678 1352 aa11.86□□□□□ -0.51
TCF4-241ENST00000568740 KIDINS220Q9ULH0 1771 aa11.86□□□□□ -0.51
TCF4-241ENST00000568740 A2MP01023 1474 aa11.85□□□□□ -0.51
TCF4-241ENST00000568740 ATXN8OSP0DMR3 200 aa11.84□□□□□ -0.51
TCF4-241ENST00000568740 CCDC184Q52MB2 194 aa11.84□□□□□ -0.51
TCF4-241ENST00000568740 UNC13BO14795 1591 aa11.84□□□□□ -0.51
TCF4-241ENST00000568740 INO80Q9ULG1 1556 aaPredicted RBP11.84□□□□□ -0.51
TCF4-241ENST00000568740 FBXO31Q5XUX0 539 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms