RNA–Protein interactions for RNA: ENST00000567838.1

THSD4-206, Transcript of thrombospondin type 1 domain containing 4, humanhuman

TSL 2

Gene THSD4, Length 2,645 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4-206ENST00000567838 FAM9BQ8IZU0 186 aa16.55■□□□□ 0.24
THSD4-206ENST00000567838 TRAPPC8Q9Y2L5 1435 aa16.54■□□□□ 0.24
THSD4-206ENST00000567838 C11orf95C9JLR9 678 aaPredicted RBP16.54■□□□□ 0.24
THSD4-206ENST00000567838 MRS2Q9HD23 443 aa16.54■□□□□ 0.24
THSD4-206ENST00000567838 EFCAB2Q5VUJ9 269 aa16.53■□□□□ 0.24
THSD4-206ENST00000567838 NOP58Q9Y2X3 529 aaKnown RBP16.53■□□□□ 0.24
THSD4-206ENST00000567838 POLR3GLQ9BT43 218 aa16.52■□□□□ 0.24
THSD4-206ENST00000567838 NPM1P06748 294 aaKnown RBP eCLIP16.52■□□□□ 0.23
THSD4-206ENST00000567838 ASXL2Q76L83 1435 aa16.5■□□□□ 0.23
THSD4-206ENST00000567838 PLEKHH2Q8IVE3 1493 aa16.49■□□□□ 0.23
THSD4-206ENST00000567838 SENP3Q9H4L4 574 aaPredicted RBP16.49■□□□□ 0.23
THSD4-206ENST00000567838 SPATA31E1Q6ZUB1 1445 aa16.48■□□□□ 0.23
THSD4-206ENST00000567838 PRKCSHP14314 528 aaPredicted RBP16.48■□□□□ 0.23
THSD4-206ENST00000567838 RSPH4AQ5TD94 716 aa16.48■□□□□ 0.23
THSD4-206ENST00000567838 UHRF1BP1LA0JNW5 1464 aa16.47■□□□□ 0.23
THSD4-206ENST00000567838 PLCH2O75038 1416 aa16.47■□□□□ 0.23
THSD4-206ENST00000567838 PAK3O75914 559 aaPredicted RBP16.47■□□□□ 0.23
THSD4-206ENST00000567838 SMG6Q86US8 1419 aaKnown RBP16.47■□□□□ 0.23
THSD4-206ENST00000567838 KDM5DQ9BY66 1539 aa16.46■□□□□ 0.23
THSD4-206ENST00000567838 ARID4BQ4LE39 1312 aaPredicted RBP16.46■□□□□ 0.23
THSD4-206ENST00000567838 DCAF11Q8TEB1 546 aa16.45■□□□□ 0.22
THSD4-206ENST00000567838 WDR7Q9Y4E6 1490 aa16.45■□□□□ 0.22
THSD4-206ENST00000567838 SPAG9O60271 1321 aaKnown RBP16.45■□□□□ 0.22
THSD4-206ENST00000567838 FAM135AQ9P2D6 1515 aa16.44■□□□□ 0.22
THSD4-206ENST00000567838 RAPGEF3O95398 923 aa16.44■□□□□ 0.22
THSD4-206ENST00000567838 KIF7Q2M1P5 1343 aa16.43■□□□□ 0.22
THSD4-206ENST00000567838 SCAPERQ9BY12 1400 aa16.43■□□□□ 0.22
THSD4-206ENST00000567838 RNF123Q5XPI4 1314 aa16.42■□□□□ 0.22
THSD4-206ENST00000567838 MAST1Q9Y2H9 1570 aa16.42■□□□□ 0.22
THSD4-206ENST00000567838 NBR1Q14596 966 aa16.42■□□□□ 0.22
THSD4-206ENST00000567838 FANCAO15360 1455 aa16.41■□□□□ 0.22
THSD4-206ENST00000567838 KIF3BO15066 747 aa16.41■□□□□ 0.22
THSD4-206ENST00000567838 ROCK2O75116 1388 aaKnown RBP16.4■□□□□ 0.22
THSD4-206ENST00000567838 NUDCQ9Y266 331 aa16.39■□□□□ 0.21
THSD4-206ENST00000567838 ABCC1P33527 1531 aa16.39■□□□□ 0.21
THSD4-206ENST00000567838 PLXNC1O60486 1568 aa16.39■□□□□ 0.21
THSD4-206ENST00000567838 IPO9Q96P70 1041 aaKnown RBP16.38■□□□□ 0.21
THSD4-206ENST00000567838 SENP3-EIF4A1A0A087X0R7 540 aa16.38■□□□□ 0.21
THSD4-206ENST00000567838 UNC13BO14795 1591 aa16.37■□□□□ 0.21
THSD4-206ENST00000567838 ANP32AP39687 249 aaKnown RBP16.37■□□□□ 0.21
THSD4-206ENST00000567838 USP47Q96K76 1375 aa16.37■□□□□ 0.21
THSD4-206ENST00000567838 CCDC136Q96JN2 1154 aa16.36■□□□□ 0.21
THSD4-206ENST00000567838 DHX29Q7Z478 1369 aaKnown RBP16.36■□□□□ 0.21
THSD4-206ENST00000567838 ADGRL1O94910 1474 aa16.35■□□□□ 0.21
THSD4-206ENST00000567838 GGT6Q6P531 493 aa16.35■□□□□ 0.21
THSD4-206ENST00000567838 DUOX2Q9NRD8 1548 aa16.35■□□□□ 0.21
THSD4-206ENST00000567838 KTN1Q86UP2 1357 aaKnown RBP16.34■□□□□ 0.21
THSD4-206ENST00000567838 BCORL1Q5H9F3 1711 aa16.34■□□□□ 0.21
THSD4-206ENST00000567838 KDM5CP41229 1560 aa16.34■□□□□ 0.21
THSD4-206ENST00000567838 CCDC144AA2RUR9 1427 aa16.34■□□□□ 0.21
THSD4-206ENST00000567838 NBPF1Q3BBV0 1214 aa16.33■□□□□ 0.21
THSD4-206ENST00000567838 UHRF1BP1Q6BDS2 1440 aa16.32■□□□□ 0.2
THSD4-206ENST00000567838 CD109Q6YHK3 1445 aa16.32■□□□□ 0.2
THSD4-206ENST00000567838 IQGAP3Q86VI3 1631 aa16.32■□□□□ 0.2
THSD4-206ENST00000567838 CARD11Q9BXL7 1154 aa16.32■□□□□ 0.2
THSD4-206ENST00000567838 PLA2R1Q13018 1463 aa16.32■□□□□ 0.2
THSD4-206ENST00000567838 ZBTB47Q9UFB7 747 aaPredicted RBP16.32■□□□□ 0.2
THSD4-206ENST00000567838 RALGAPBQ86X10 1494 aa16.31■□□□□ 0.2
THSD4-206ENST00000567838 ERBINQ96RT1 1412 aa16.31■□□□□ 0.2
THSD4-206ENST00000567838 FAM69CQ0P6D2 419 aa16.3■□□□□ 0.2
THSD4-206ENST00000567838 CFAP65Q6ZU64 1925 aaKnown RBP16.3■□□□□ 0.2
THSD4-206ENST00000567838 RTL5Q5HYW3 569 aaPredicted RBP16.29■□□□□ 0.2
THSD4-206ENST00000567838 ZFYVE16Q7Z3T8 1539 aa16.28■□□□□ 0.2
THSD4-206ENST00000567838 ABCA9Q8IUA7 1624 aa16.27■□□□□ 0.2
THSD4-206ENST00000567838 ARAP3Q8WWN8 1544 aa16.27■□□□□ 0.19
THSD4-206ENST00000567838 NUTM2DQ5VT03 806 aaPredicted RBP16.27■□□□□ 0.19
THSD4-206ENST00000567838 MAGI2Q86UL8 1455 aa16.27■□□□□ 0.19
THSD4-206ENST00000567838 ST20-MTHFSA0A0A6YYL1 179 aa16.26■□□□□ 0.19
THSD4-206ENST00000567838 CHGAP10645 457 aaKnown RBP16.26■□□□□ 0.19
THSD4-206ENST00000567838 PNISRQ8TF01 805 aaKnown RBP16.25■□□□□ 0.19
THSD4-206ENST00000567838 A2MP01023 1474 aa16.24■□□□□ 0.19
THSD4-206ENST00000567838 BRD4O60885 1362 aaPredicted RBP16.23■□□□□ 0.19
THSD4-206ENST00000567838 PRAG1Q86YV5 1406 aa16.23■□□□□ 0.19
THSD4-206ENST00000567838 ATP7AQ04656 1500 aa16.23■□□□□ 0.19
THSD4-206ENST00000567838 RIMBP3CA6NJZ7 1639 aa16.22■□□□□ 0.19
THSD4-206ENST00000567838 RIMBP3BA6NNM3 1639 aa16.22■□□□□ 0.19
THSD4-206ENST00000567838 RIMBP3Q9UFD9 1639 aa16.22■□□□□ 0.19
THSD4-206ENST00000567838 RTEL1-TNFRSF6BF6WH68 1400 aa16.22■□□□□ 0.19
THSD4-206ENST00000567838 TRPM1Q7Z4N2 1603 aa16.22■□□□□ 0.19
THSD4-206ENST00000567838 TSPOAP1O95153 1857 aa16.21■□□□□ 0.19
THSD4-206ENST00000567838 RALBP1Q15311 655 aa16.21■□□□□ 0.19
THSD4-206ENST00000567838 E9PCH4 1651 aa16.21■□□□□ 0.19
THSD4-206ENST00000567838 UGGT1Q9NYU2 1555 aa16.21■□□□□ 0.19
THSD4-206ENST00000567838 INO80Q9ULG1 1556 aaPredicted RBP16.2■□□□□ 0.18
THSD4-206ENST00000567838 TMC1Q8TDI8 760 aa16.2■□□□□ 0.18
THSD4-206ENST00000567838 LRPPRCP42704 1394 aaKnown RBP16.2■□□□□ 0.18
THSD4-206ENST00000567838 MLECQ14165 292 aa16.19■□□□□ 0.18
THSD4-206ENST00000567838 MYBBP1AQ9BQG0 1328 aaKnown RBP16.19■□□□□ 0.18
THSD4-206ENST00000567838 TCERG1O14776 1098 aaKnown RBP16.17■□□□□ 0.18
THSD4-206ENST00000567838 RRP1P56182 461 aaKnown RBP16.17■□□□□ 0.18
THSD4-206ENST00000567838 ATP10AO60312 1499 aa16.16■□□□□ 0.18
THSD4-206ENST00000567838 INSRP06213 1382 aa16.16■□□□□ 0.18
THSD4-206ENST00000567838 ZMYM4Q5VZL5 1548 aa16.16■□□□□ 0.18
THSD4-206ENST00000567838 DEPDC5O75140 1603 aa16.15■□□□□ 0.18
THSD4-206ENST00000567838 KIDINS220Q9ULH0 1771 aa16.15■□□□□ 0.18
THSD4-206ENST00000567838 PDE3BQ13370 1112 aa16.15■□□□□ 0.18
THSD4-206ENST00000567838 EXOC6Q8TAG9 804 aa16.15■□□□□ 0.18
THSD4-206ENST00000567838 SPHKAPQ2M3C7 1700 aa16.14■□□□□ 0.17
THSD4-206ENST00000567838 YEATS2Q9ULM3 1422 aa16.14■□□□□ 0.17
THSD4-206ENST00000567838 NPM2Q86SE8 214 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms