RNA–Protein interactions for RNA: ENST00000567432.1

GINS3-208, Transcript of GINS complex subunit 3, humanhuman

TSL 3

Gene GINS3, Length 322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-208ENST00000567432 HIC1Q14526 733 aa5.32□□□□□ -1.56
GINS3-208ENST00000567432 FAM163AQ96GL9 167 aaPredicted RBP5.32□□□□□ -1.56
GINS3-208ENST00000567432 CDHR5Q9HBB8 845 aa5.32□□□□□ -1.56
GINS3-208ENST00000567432 NPDC1Q9NQX5 325 aaPredicted RBP5.32□□□□□ -1.56
GINS3-208ENST00000567432 BCL2L12Q9HB09 334 aa5.31□□□□□ -1.56
GINS3-208ENST00000567432 PLSCR2Q9NRY7 297 aa5.31□□□□□ -1.56
GINS3-208ENST00000567432 ERBB3P21860 1342 aa5.3□□□□□ -1.56
GINS3-208ENST00000567432 MINK1Q8N4C8 1332 aaPredicted RBP5.3□□□□□ -1.56
GINS3-208ENST00000567432 EMP3P54852 163 aa5.3□□□□□ -1.56
GINS3-208ENST00000567432 CERKQ8TCT0 537 aa5.3□□□□□ -1.56
GINS3-208ENST00000567432 MARVELD3Q96A59 401 aa5.3□□□□□ -1.56
GINS3-208ENST00000567432 AK7Q96M32 723 aa5.3□□□□□ -1.56
GINS3-208ENST00000567432 IRF6O14896 467 aa5.29□□□□□ -1.56
GINS3-208ENST00000567432 FECHP22830 423 aa5.29□□□□□ -1.56
GINS3-208ENST00000567432 PTPREP23469 700 aa5.29□□□□□ -1.56
GINS3-208ENST00000567432 MAP2K5Q13163 448 aa5.29□□□□□ -1.56
GINS3-208ENST00000567432 VARS2Q5ST30 1063 aaKnown RBP5.29□□□□□ -1.56
GINS3-208ENST00000567432 FAM205CA6NFA0 338 aa5.27□□□□□ -1.57
GINS3-208ENST00000567432 PPP1R3GB7ZBB8 358 aa5.27□□□□□ -1.57
GINS3-208ENST00000567432 COL9A1P20849 921 aa5.27□□□□□ -1.57
GINS3-208ENST00000567432 CCDC102AQ96A19 550 aa5.27□□□□□ -1.57
GINS3-208ENST00000567432 KCNH8Q96L42 1107 aa5.27□□□□□ -1.57
GINS3-208ENST00000567432 KCNK17Q96T54 332 aa5.27□□□□□ -1.57
GINS3-208ENST00000567432 TRIM66O15016 1216 aa5.26□□□□□ -1.57
GINS3-208ENST00000567432 PRSS12P56730 875 aa5.26□□□□□ -1.57
GINS3-208ENST00000567432 LCE2DQ5TA82 110 aaPredicted RBP5.26□□□□□ -1.57
GINS3-208ENST00000567432 PADI6Q6TGC4 694 aa5.26□□□□□ -1.57
GINS3-208ENST00000567432 TTC13Q8NBP0 860 aa5.26□□□□□ -1.57
GINS3-208ENST00000567432 RBM27Q9P2N5 1060 aaKnown RBP5.26□□□□□ -1.57
GINS3-208ENST00000567432 ARHGAP33O14559 1287 aa5.25□□□□□ -1.57
GINS3-208ENST00000567432 PBX2P40425 430 aa5.25□□□□□ -1.57
GINS3-208ENST00000567432 ZNF687Q8N1G0 1237 aa5.25□□□□□ -1.57
GINS3-208ENST00000567432 CDCA7LQ96GN5 454 aa5.25□□□□□ -1.57
GINS3-208ENST00000567432 BRPF1P55201 1214 aaPredicted RBP5.24□□□□□ -1.57
GINS3-208ENST00000567432 NEUROD2Q15784 382 aa5.24□□□□□ -1.57
GINS3-208ENST00000567432 HS3ST6Q96QI5 342 aa5.24□□□□□ -1.57
GINS3-208ENST00000567432 POTEB3A0JP26 581 aa5.23□□□□□ -1.57
GINS3-208ENST00000567432 OATP04181 439 aa5.23□□□□□ -1.57
GINS3-208ENST00000567432 PSEN2P49810 448 aa5.23□□□□□ -1.57
GINS3-208ENST00000567432 PDE4DQ08499 809 aa5.23□□□□□ -1.57
GINS3-208ENST00000567432 POTEBQ6S5H4 581 aa5.23□□□□□ -1.57
GINS3-208ENST00000567432 POTEEQ6S8J3 1075 aa5.23□□□□□ -1.57
GINS3-208ENST00000567432 TSKSQ9UJT2 592 aa5.23□□□□□ -1.57
GINS3-208ENST00000567432 ADGRG1Q9Y653 693 aa5.23□□□□□ -1.57
GINS3-208ENST00000567432 TRIM6-TRIM34B2RNG4 842 aa5.22□□□□□ -1.57
GINS3-208ENST00000567432 ONECUT3O60422 494 aaPredicted RBP5.22□□□□□ -1.57
GINS3-208ENST00000567432 AMHR2Q16671 573 aa5.22□□□□□ -1.57
GINS3-208ENST00000567432 FAM161AQ3B820 660 aa5.22□□□□□ -1.57
GINS3-208ENST00000567432 PACS2Q86VP3 889 aa5.22□□□□□ -1.57
GINS3-208ENST00000567432 FAM198AQ9UFP1 575 aa5.22□□□□□ -1.57
GINS3-208ENST00000567432 AXIN2Q9Y2T1 843 aa5.22□□□□□ -1.57
GINS3-208ENST00000567432 PROX2Q3B8N5 592 aa5.21□□□□□ -1.58
GINS3-208ENST00000567432 DMRTA1Q5VZB9 504 aa5.21□□□□□ -1.58
GINS3-208ENST00000567432 METTL3Q86U44 580 aaKnown RBP5.21□□□□□ -1.58
GINS3-208ENST00000567432 RBM46Q8TBY0 533 aaKnown RBP5.21□□□□□ -1.58
GINS3-208ENST00000567432 ZBED2Q9BTP6 218 aa5.21□□□□□ -1.58
GINS3-208ENST00000567432 SLC4A5Q9BY07 1137 aa5.21□□□□□ -1.58
GINS3-208ENST00000567432 NBPF26B4DH59 902 aa5.2□□□□□ -1.58
GINS3-208ENST00000567432 PXYLP1Q8TE99 480 aa5.2□□□□□ -1.58
GINS3-208ENST00000567432 TATDN2Q93075 761 aa5.2□□□□□ -1.58
GINS3-208ENST00000567432 PHOX2BQ99453 314 aa5.2□□□□□ -1.58
GINS3-208ENST00000567432 KIAA1468Q9P260 1216 aa5.2□□□□□ -1.58
GINS3-208ENST00000567432 TTLL12Q14166 644 aaPredicted RBP5.19□□□□□ -1.58
GINS3-208ENST00000567432 NUDT18Q6ZVK8 323 aa5.19□□□□□ -1.58
GINS3-208ENST00000567432 PARP9Q8IXQ6 854 aa5.19□□□□□ -1.58
GINS3-208ENST00000567432 EYA1Q99502 592 aa5.19□□□□□ -1.58
GINS3-208ENST00000567432 KDM4CQ9H3R0 1056 aa5.19□□□□□ -1.58
GINS3-208ENST00000567432 GPBP1L1Q9HC44 474 aaPredicted RBP5.19□□□□□ -1.58
GINS3-208ENST00000567432 VPS9D1Q9Y2B5 631 aa5.19□□□□□ -1.58
GINS3-208ENST00000567432 C3orf80F5H4A9 247 aa5.18□□□□□ -1.58
GINS3-208ENST00000567432 CLCN1P35523 988 aa5.18□□□□□ -1.58
GINS3-208ENST00000567432 LSM11P83369 360 aaKnown RBP eCLIP5.18□□□□□ -1.58
GINS3-208ENST00000567432 MDM2Q00987 491 aaPredicted RBP5.18□□□□□ -1.58
GINS3-208ENST00000567432 RABGEF1Q9UJ41 708 aa5.18□□□□□ -1.58
GINS3-208ENST00000567432 PNMA3Q9UL41 463 aa5.18□□□□□ -1.58
GINS3-208ENST00000567432 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.17□□□□□ -1.58
GINS3-208ENST00000567432 RCCD1A6NED2 376 aa5.17□□□□□ -1.58
GINS3-208ENST00000567432 TK2O00142 265 aa5.17□□□□□ -1.58
GINS3-208ENST00000567432 SMAPO00193 183 aa5.17□□□□□ -1.58
GINS3-208ENST00000567432 GIGYF2Q6Y7W6 1299 aaKnown RBP5.17□□□□□ -1.58
GINS3-208ENST00000567432 TMUB1Q9BVT8 246 aa5.17□□□□□ -1.58
GINS3-208ENST00000567432 GPCPD1Q9NPB8 672 aa5.17□□□□□ -1.58
GINS3-208ENST00000567432 NLRP7Q8WX94 980 aa5.16□□□□□ -1.58
GINS3-208ENST00000567432 REPIN1Q9BWE0 567 aaKnown RBP5.16□□□□□ -1.58
GINS3-208ENST00000567432 BHMG1C9JSJ3 638 aaPredicted RBP5.15□□□□□ -1.59
GINS3-208ENST00000567432 DNAJB2P25686 324 aa5.15□□□□□ -1.59
GINS3-208ENST00000567432 TMEM132AQ24JP5 1023 aa5.15□□□□□ -1.59
GINS3-208ENST00000567432 ADGRD1Q6QNK2 874 aa5.15□□□□□ -1.59
GINS3-208ENST00000567432 NBPF3Q9H094 633 aa5.15□□□□□ -1.59
GINS3-208ENST00000567432 DAXXQ9UER7 740 aaPredicted RBP5.15□□□□□ -1.59
GINS3-208ENST00000567432 SSTR3P32745 418 aaPredicted RBP5.14□□□□□ -1.59
GINS3-208ENST00000567432 FAM98CQ17RN3 349 aaKnown RBP5.14□□□□□ -1.59
GINS3-208ENST00000567432 ANKRD13DQ6ZTN6 518 aa5.14□□□□□ -1.59
GINS3-208ENST00000567432 LAPTM4BQ86VI4 370 aa5.14□□□□□ -1.59
GINS3-208ENST00000567432 IL27Q8NEV9 243 aa5.14□□□□□ -1.59
GINS3-208ENST00000567432 FAM117AQ9C073 453 aa5.14□□□□□ -1.59
GINS3-208ENST00000567432 TMEM134Q9H6X4 195 aa5.14□□□□□ -1.59
GINS3-208ENST00000567432 FAM217BQ9NTX9 383 aaPredicted RBP5.14□□□□□ -1.59
GINS3-208ENST00000567432 SEPT9Q9UHD8 586 aaPredicted RBP5.14□□□□□ -1.59
GINS3-208ENST00000567432 MS4A1P11836 297 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms