RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 KCNK17Q96T54 332 aa19.73■□□□□ 0.75
NIFKP4-201ENST00000567275 AXIN2Q9Y2T1 843 aa19.73■□□□□ 0.75
NIFKP4-201ENST00000567275 PRIM1P49642 420 aaKnown RBP19.7■□□□□ 0.74
NIFKP4-201ENST00000567275 C6orf132Q5T0Z8 1188 aa19.7■□□□□ 0.74
NIFKP4-201ENST00000567275 POTEEQ6S8J3 1075 aa19.7■□□□□ 0.74
NIFKP4-201ENST00000567275 PSEN2P49810 448 aa19.68■□□□□ 0.74
NIFKP4-201ENST00000567275 TSR1Q2NL82 804 aaKnown RBP19.67■□□□□ 0.74
NIFKP4-201ENST00000567275 PCDH10Q9P2E7 1040 aa19.66■□□□□ 0.74
NIFKP4-201ENST00000567275 RBM26Q5T8P6 1007 aaKnown RBP19.64■□□□□ 0.73
NIFKP4-201ENST00000567275 NUTM2FA1L443 756 aa19.62■□□□□ 0.73
NIFKP4-201ENST00000567275 KRTAP3-3Q9BYR6 98 aa19.61■□□□□ 0.73
NIFKP4-201ENST00000567275 KRTAP3-2Q9BYR7 98 aa19.61■□□□□ 0.73
NIFKP4-201ENST00000567275 PPP1R3GB7ZBB8 358 aa19.6■□□□□ 0.73
NIFKP4-201ENST00000567275 LSM11P83369 360 aaKnown RBP eCLIP19.59■□□□□ 0.73
NIFKP4-201ENST00000567275 DMRTA1Q5VZB9 504 aa19.59■□□□□ 0.73
NIFKP4-201ENST00000567275 CDHR5Q9HBB8 845 aa19.59■□□□□ 0.73
NIFKP4-201ENST00000567275 COL9A1P20849 921 aa19.57■□□□□ 0.72
NIFKP4-201ENST00000567275 ANKRD13DQ6ZTN6 518 aa19.56■□□□□ 0.72
NIFKP4-201ENST00000567275 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.55■□□□□ 0.72
NIFKP4-201ENST00000567275 CERKQ8TCT0 537 aa19.55■□□□□ 0.72
NIFKP4-201ENST00000567275 LMOD2Q6P5Q4 547 aa19.52■□□□□ 0.72
NIFKP4-201ENST00000567275 GPIHBP1Q8IV16 184 aa19.51■□□□□ 0.71
NIFKP4-201ENST00000567275 ZBED2Q9BTP6 218 aa19.5■□□□□ 0.71
NIFKP4-201ENST00000567275 FCHSD2O94868 740 aa19.47■□□□□ 0.71
NIFKP4-201ENST00000567275 PTGDRQ13258 359 aa19.47■□□□□ 0.71
NIFKP4-201ENST00000567275 SLC4A5Q9BY07 1137 aa19.47■□□□□ 0.71
NIFKP4-201ENST00000567275 TK2O00142 265 aa19.46■□□□□ 0.71
NIFKP4-201ENST00000567275 ADGRD1Q6QNK2 874 aa19.46■□□□□ 0.71
NIFKP4-201ENST00000567275 NPDC1Q9NQX5 325 aaPredicted RBP19.46■□□□□ 0.71
NIFKP4-201ENST00000567275 PROX2Q3B8N5 592 aa19.44■□□□□ 0.7
NIFKP4-201ENST00000567275 PRSS12P56730 875 aa19.43■□□□□ 0.7
NIFKP4-201ENST00000567275 VPS9D1Q9Y2B5 631 aa19.43■□□□□ 0.7
NIFKP4-201ENST00000567275 CDCA7LQ96GN5 454 aa19.42■□□□□ 0.7
NIFKP4-201ENST00000567275 TRIM6-TRIM34B2RNG4 842 aa19.39■□□□□ 0.69
NIFKP4-201ENST00000567275 HIC1Q14526 733 aa19.38■□□□□ 0.69
NIFKP4-201ENST00000567275 RBM27Q9P2N5 1060 aaKnown RBP19.37■□□□□ 0.69
NIFKP4-201ENST00000567275 ONECUT3O60422 494 aaPredicted RBP19.36■□□□□ 0.69
NIFKP4-201ENST00000567275 PADI6Q6TGC4 694 aa19.36■□□□□ 0.69
NIFKP4-201ENST00000567275 STAC3Q96MF2 364 aa19.36■□□□□ 0.69
NIFKP4-201ENST00000567275 PACS2Q86VP3 889 aa19.35■□□□□ 0.69
NIFKP4-201ENST00000567275 RABGEF1Q9UJ41 708 aa19.35■□□□□ 0.69
NIFKP4-201ENST00000567275 GPR37O15354 613 aa19.34■□□□□ 0.69
NIFKP4-201ENST00000567275 KIAA1468Q9P260 1216 aa19.34■□□□□ 0.69
NIFKP4-201ENST00000567275 TSKSQ9UJT2 592 aa19.34■□□□□ 0.69
NIFKP4-201ENST00000567275 GNPATO15228 680 aa19.33■□□□□ 0.68
NIFKP4-201ENST00000567275 NBPF3Q9H094 633 aa19.31■□□□□ 0.68
NIFKP4-201ENST00000567275 HRO43593 1189 aa19.3■□□□□ 0.68
NIFKP4-201ENST00000567275 FAM198AQ9UFP1 575 aa19.28■□□□□ 0.68
NIFKP4-201ENST00000567275 NBPF26B4DH59 902 aa19.26■□□□□ 0.67
NIFKP4-201ENST00000567275 TTC13Q8NBP0 860 aa19.26■□□□□ 0.67
NIFKP4-201ENST00000567275 ZC3H15Q8WU90 426 aaKnown RBP19.26■□□□□ 0.67
NIFKP4-201ENST00000567275 BHMG1C9JSJ3 638 aaPredicted RBP19.25■□□□□ 0.67
NIFKP4-201ENST00000567275 SPNS2Q8IVW8 549 aa19.25■□□□□ 0.67
NIFKP4-201ENST00000567275 MRPL50Q8N5N7 158 aaKnown RBP19.25■□□□□ 0.67
NIFKP4-201ENST00000567275 PNMA3Q9UL41 463 aa19.24■□□□□ 0.67
NIFKP4-201ENST00000567275 FECHP22830 423 aa19.23■□□□□ 0.67
NIFKP4-201ENST00000567275 TATDN2Q93075 761 aa19.22■□□□□ 0.67
NIFKP4-201ENST00000567275 SEPT9Q9UHD8 586 aaPredicted RBP19.21■□□□□ 0.67
NIFKP4-201ENST00000567275 NUDT18Q6ZVK8 323 aa19.2■□□□□ 0.66
NIFKP4-201ENST00000567275 GOLGA8CPA6NN73 597 aa19.18■□□□□ 0.66
NIFKP4-201ENST00000567275 SMAPO00193 183 aa19.18■□□□□ 0.66
NIFKP4-201ENST00000567275 LAPTM4BQ86VI4 370 aa19.17■□□□□ 0.66
NIFKP4-201ENST00000567275 MYT1LQ9UL68 1186 aa19.17■□□□□ 0.66
NIFKP4-201ENST00000567275 C3orf80F5H4A9 247 aa19.15■□□□□ 0.66
NIFKP4-201ENST00000567275 ZMYND10O75800 440 aa19.15■□□□□ 0.66
NIFKP4-201ENST00000567275 ADGRG1Q9Y653 693 aa19.15■□□□□ 0.66
NIFKP4-201ENST00000567275 MAP2K5Q13163 448 aa19.14■□□□□ 0.65
NIFKP4-201ENST00000567275 FAM98CQ17RN3 349 aaKnown RBP19.14■□□□□ 0.65
NIFKP4-201ENST00000567275 FAM161AQ3B820 660 aa19.14■□□□□ 0.65
NIFKP4-201ENST00000567275 KRI1Q8N9T8 703 aaKnown RBP19.14■□□□□ 0.65
NIFKP4-201ENST00000567275 RBM46Q8TBY0 533 aaKnown RBP19.14■□□□□ 0.65
NIFKP4-201ENST00000567275 OATP04181 439 aa19.11■□□□□ 0.65
NIFKP4-201ENST00000567275 BARGINQ6ZT62 677 aa19.11■□□□□ 0.65
NIFKP4-201ENST00000567275 MINK1Q8N4C8 1332 aaPredicted RBP19.09■□□□□ 0.65
NIFKP4-201ENST00000567275 ZFRQ96KR1 1074 aaKnown RBP19.08■□□□□ 0.64
NIFKP4-201ENST00000567275 EYA1Q99502 592 aa19.08■□□□□ 0.64
NIFKP4-201ENST00000567275 IRF6O14896 467 aa19.06■□□□□ 0.64
NIFKP4-201ENST00000567275 WNT2BQ93097 391 aa19.05■□□□□ 0.64
NIFKP4-201ENST00000567275 RNF166Q96A37 237 aaPredicted RBP19.05■□□□□ 0.64
NIFKP4-201ENST00000567275 MMRN1Q13201 1228 aa19.04■□□□□ 0.64
NIFKP4-201ENST00000567275 ANKK1Q8NFD2 765 aa19.04■□□□□ 0.64
NIFKP4-201ENST00000567275 PXYLP1Q8TE99 480 aa19.04■□□□□ 0.64
NIFKP4-201ENST00000567275 KCTD12Q96CX2 325 aaKnown RBP19.04■□□□□ 0.64
NIFKP4-201ENST00000567275 HDGFP51858 240 aaKnown RBP19.03■□□□□ 0.64
NIFKP4-201ENST00000567275 METTL3Q86U44 580 aaKnown RBP19.03■□□□□ 0.64
NIFKP4-201ENST00000567275 CCDC102AQ96A19 550 aa19.02■□□□□ 0.64
NIFKP4-201ENST00000567275 DNAJB2P25686 324 aa19■□□□□ 0.63
NIFKP4-201ENST00000567275 RCCD1A6NED2 376 aa18.99■□□□□ 0.63
NIFKP4-201ENST00000567275 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.97■□□□□ 0.63
NIFKP4-201ENST00000567275 LRCH3Q96II8 777 aa18.97■□□□□ 0.63
NIFKP4-201ENST00000567275 PLSCR2Q9NRY7 297 aa18.97■□□□□ 0.63
NIFKP4-201ENST00000567275 TPRNQ4KMQ1 711 aa18.96■□□□□ 0.63
NIFKP4-201ENST00000567275 SAMD7Q7Z3H4 446 aa18.96■□□□□ 0.63
NIFKP4-201ENST00000567275 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.95■□□□□ 0.62
NIFKP4-201ENST00000567275 SWT1Q5T5J6 900 aaKnown RBP18.93■□□□□ 0.62
NIFKP4-201ENST00000567275 SLC24A3Q9HC58 644 aa18.93■□□□□ 0.62
NIFKP4-201ENST00000567275 THSD4Q6ZMP0 1018 aa18.92■□□□□ 0.62
NIFKP4-201ENST00000567275 TMEM134Q9H6X4 195 aa18.92■□□□□ 0.62
NIFKP4-201ENST00000567275 SOWAHBA6NEL2 793 aa18.91■□□□□ 0.62
NIFKP4-201ENST00000567275 SLC4A3P48751 1232 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms