RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 BCORL1Q5H9F3 1711 aa25.82■■□□□ 1.72
MSLN-207ENST00000566549 FAM9BQ8IZU0 186 aa25.82■■□□□ 1.72
MSLN-207ENST00000566549 PLXNC1O60486 1568 aa25.8■■□□□ 1.72
MSLN-207ENST00000566549 AFAP1Q8N556 730 aa25.79■■□□□ 1.72
MSLN-207ENST00000566549 UNC13BO14795 1591 aa25.79■■□□□ 1.72
MSLN-207ENST00000566549 ST20-MTHFSA0A0A6YYL1 179 aa25.78■■□□□ 1.72
MSLN-207ENST00000566549 PLA2R1Q13018 1463 aa25.78■■□□□ 1.72
MSLN-207ENST00000566549 DUOX2Q9NRD8 1548 aa25.78■■□□□ 1.72
MSLN-207ENST00000566549 ABCC1P33527 1531 aa25.77■■□□□ 1.72
MSLN-207ENST00000566549 ROCK2O75116 1388 aaKnown RBP25.77■■□□□ 1.72
MSLN-207ENST00000566549 NEFLP07196 543 aa25.76■■□□□ 1.71
MSLN-207ENST00000566549 POLR1AO95602 1720 aaPredicted RBP25.76■■□□□ 1.71
MSLN-207ENST00000566549 SPAG9O60271 1321 aaKnown RBP25.74■■□□□ 1.71
MSLN-207ENST00000566549 ERBINQ96RT1 1412 aa25.73■■□□□ 1.71
MSLN-207ENST00000566549 DHX29Q7Z478 1369 aaKnown RBP25.72■■□□□ 1.71
MSLN-207ENST00000566549 WDR7Q9Y4E6 1490 aa25.71■■□□□ 1.71
MSLN-207ENST00000566549 IQGAP3Q86VI3 1631 aa25.7■■□□□ 1.71
MSLN-207ENST00000566549 PRAG1Q86YV5 1406 aa25.69■■□□□ 1.7
MSLN-207ENST00000566549 NBPF1Q3BBV0 1214 aa25.69■■□□□ 1.7
MSLN-207ENST00000566549 MYT1LQ9UL68 1186 aa25.68■■□□□ 1.7
MSLN-207ENST00000566549 A2MP01023 1474 aa25.67■■□□□ 1.7
MSLN-207ENST00000566549 ARID4BQ4LE39 1312 aaPredicted RBP25.67■■□□□ 1.7
MSLN-207ENST00000566549 MAGI2Q86UL8 1455 aa25.66■■□□□ 1.7
MSLN-207ENST00000566549 FANCAO15360 1455 aa25.63■■□□□ 1.69
MSLN-207ENST00000566549 ZFYVE16Q7Z3T8 1539 aa25.61■■□□□ 1.69
MSLN-207ENST00000566549 ASXL2Q76L83 1435 aa25.59■■□□□ 1.69
MSLN-207ENST00000566549 IRX6P78412 446 aaPredicted RBP25.59■■□□□ 1.69
MSLN-207ENST00000566549 TRPM1Q7Z4N2 1603 aa25.59■■□□□ 1.69
MSLN-207ENST00000566549 ARAP3Q8WWN8 1544 aa25.58■■□□□ 1.69
MSLN-207ENST00000566549 RTEL1-TNFRSF6BF6WH68 1400 aa25.58■■□□□ 1.69
MSLN-207ENST00000566549 SCAPERQ9BY12 1400 aa25.56■■□□□ 1.68
MSLN-207ENST00000566549 ATP10AO60312 1499 aa25.56■■□□□ 1.68
MSLN-207ENST00000566549 ADGRL1O94910 1474 aa25.56■■□□□ 1.68
MSLN-207ENST00000566549 SENP3-EIF4A1A0A087X0R7 540 aa25.54■■□□□ 1.68
MSLN-207ENST00000566549 KIF3BO15066 747 aa25.54■■□□□ 1.68
MSLN-207ENST00000566549 OSCARQ8IYS5 282 aa25.54■■□□□ 1.68
MSLN-207ENST00000566549 ZBED9Q6R2W3 1325 aa25.52■■□□□ 1.68
MSLN-207ENST00000566549 ABCA9Q8IUA7 1624 aa25.52■■□□□ 1.68
MSLN-207ENST00000566549 ATP7AQ04656 1500 aa25.52■■□□□ 1.68
MSLN-207ENST00000566549 GPRASP1Q5JY77 1395 aa25.51■■□□□ 1.67
MSLN-207ENST00000566549 NPM1P06748 294 aaKnown RBP eCLIP25.49■■□□□ 1.67
MSLN-207ENST00000566549 TSHZ2Q9NRE2 1034 aa25.49■■□□□ 1.67
MSLN-207ENST00000566549 E9PCH4 1651 aa25.49■■□□□ 1.67
MSLN-207ENST00000566549 TMC1Q8TDI8 760 aa25.48■■□□□ 1.67
MSLN-207ENST00000566549 INO80Q9ULG1 1556 aaPredicted RBP25.46■■□□□ 1.67
MSLN-207ENST00000566549 DISP3Q9P2K9 1392 aa25.45■■□□□ 1.67
MSLN-207ENST00000566549 TESK2Q96S53 571 aa25.45■■□□□ 1.67
MSLN-207ENST00000566549 KANK1Q14678 1352 aa25.45■■□□□ 1.66
MSLN-207ENST00000566549 PRDM15P57071 1507 aaPredicted RBP25.44■■□□□ 1.66
MSLN-207ENST00000566549 EIF2AK4Q9P2K8 1649 aaKnown RBP25.42■■□□□ 1.66
MSLN-207ENST00000566549 TRPM2O94759 1503 aa25.42■■□□□ 1.66
MSLN-207ENST00000566549 PNISRQ8TF01 805 aaKnown RBP25.41■■□□□ 1.66
MSLN-207ENST00000566549 MYBBP1AQ9BQG0 1328 aaKnown RBP25.4■■□□□ 1.66
MSLN-207ENST00000566549 COL17A1Q9UMD9 1497 aaPredicted RBP25.4■■□□□ 1.66
MSLN-207ENST00000566549 DEPDC5O75140 1603 aa25.4■■□□□ 1.66
MSLN-207ENST00000566549 PTPRTO14522 1441 aa25.39■■□□□ 1.65
MSLN-207ENST00000566549 RALBP1Q15311 655 aa25.38■■□□□ 1.65
MSLN-207ENST00000566549 CLTCL1P53675 1640 aa25.37■■□□□ 1.65
MSLN-207ENST00000566549 TMF1P82094 1093 aa25.37■■□□□ 1.65
MSLN-207ENST00000566549 LAMC1P11047 1609 aa25.36■■□□□ 1.65
MSLN-207ENST00000566549 SPHKAPQ2M3C7 1700 aa25.35■■□□□ 1.65
MSLN-207ENST00000566549 CC2D1BQ5T0F9 858 aaKnown RBP25.35■■□□□ 1.65
MSLN-207ENST00000566549 KTN1Q86UP2 1357 aaKnown RBP25.35■■□□□ 1.65
MSLN-207ENST00000566549 TET3O43151 1660 aa25.35■■□□□ 1.65
MSLN-207ENST00000566549 PER1O15534 1290 aaPredicted RBP25.34■■□□□ 1.65
MSLN-207ENST00000566549 CD109Q6YHK3 1445 aa25.34■■□□□ 1.65
MSLN-207ENST00000566549 PANK3Q9H999 370 aa25.34■■□□□ 1.65
MSLN-207ENST00000566549 MADDQ8WXG6 1647 aa25.33■■□□□ 1.64
MSLN-207ENST00000566549 VWDEQ8N2E2 1590 aa25.32■■□□□ 1.64
MSLN-207ENST00000566549 UGGT1Q9NYU2 1555 aa25.32■■□□□ 1.64
MSLN-207ENST00000566549 ZNF518AQ6AHZ1 1483 aa25.32■■□□□ 1.64
MSLN-207ENST00000566549 BRD4O60885 1362 aaPredicted RBP25.32■■□□□ 1.64
MSLN-207ENST00000566549 MROH1Q8NDA8 1641 aa25.3■■□□□ 1.64
MSLN-207ENST00000566549 RNF17Q9BXT8 1623 aaKnown RBP25.3■■□□□ 1.64
MSLN-207ENST00000566549 KIDINS220Q9ULH0 1771 aa25.29■■□□□ 1.64
MSLN-207ENST00000566549 PARD3Q8TEW0 1356 aa25.29■■□□□ 1.64
MSLN-207ENST00000566549 CEP152O94986 1710 aa25.29■■□□□ 1.64
MSLN-207ENST00000566549 NLRP13Q86W25 1043 aa25.27■■□□□ 1.64
MSLN-207ENST00000566549 GGT6Q6P531 493 aa25.27■■□□□ 1.64
MSLN-207ENST00000566549 LRPPRCP42704 1394 aaKnown RBP25.25■■□□□ 1.63
MSLN-207ENST00000566549 POGZQ7Z3K3 1410 aa25.24■■□□□ 1.63
MSLN-207ENST00000566549 NUDCQ9Y266 331 aa25.24■■□□□ 1.63
MSLN-207ENST00000566549 SMG6Q86US8 1419 aaKnown RBP25.24■■□□□ 1.63
MSLN-207ENST00000566549 SALL2Q9Y467 1007 aaPredicted RBP25.24■■□□□ 1.63
MSLN-207ENST00000566549 CHGAP10645 457 aaKnown RBP25.23■■□□□ 1.63
MSLN-207ENST00000566549 CFAP70Q5T0N1 1121 aa25.23■■□□□ 1.63
MSLN-207ENST00000566549 RAPGEF3O95398 923 aa25.22■■□□□ 1.63
MSLN-207ENST00000566549 SCAF11Q99590 1463 aaKnown RBP25.22■■□□□ 1.63
MSLN-207ENST00000566549 EFCAB6Q5THR3 1501 aa25.22■■□□□ 1.63
MSLN-207ENST00000566549 ADGRF5Q8IZF2 1346 aa25.22■■□□□ 1.63
MSLN-207ENST00000566549 STAC3Q96MF2 364 aa25.21■■□□□ 1.63
MSLN-207ENST00000566549 PPRC1Q5VV67 1664 aaKnown RBP25.19■■□□□ 1.62
MSLN-207ENST00000566549 PPP4R2Q9NY27 417 aa25.18■■□□□ 1.62
MSLN-207ENST00000566549 IQGAP1P46940 1657 aa25.18■■□□□ 1.62
MSLN-207ENST00000566549 WASHC2CQ9Y4E1 1318 aa25.16■■□□□ 1.62
MSLN-207ENST00000566549 ERICH6BQ5W0A0 696 aa25.16■■□□□ 1.62
MSLN-207ENST00000566549 B4GALNT3Q6L9W6 998 aa25.16■■□□□ 1.62
MSLN-207ENST00000566549 FRMPD1Q5SYB0 1578 aa25.15■■□□□ 1.62
MSLN-207ENST00000566549 CFAP74Q9C0B2 1584 aa25.14■■□□□ 1.61
MSLN-207ENST00000566549 MLH3Q9UHC1 1453 aa25.14■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms