RNA–Protein interactions for RNA: ENST00000566197.1

BBS4-209, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 3

Gene BBS4, Length 541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-209ENST00000566197 TCOF1Q13428 1488 aaKnown RBP12.85□□□□□ -0.35
BBS4-209ENST00000566197 IQSEC2Q5JU85 1478 aa12.85□□□□□ -0.35
BBS4-209ENST00000566197 ZNF142P52746 1687 aaPredicted RBP12.84□□□□□ -0.35
BBS4-209ENST00000566197 ZC3H13Q5T200 1668 aaKnown RBP12.84□□□□□ -0.35
BBS4-209ENST00000566197 PPP6R1Q9UPN7 881 aa12.84□□□□□ -0.35
BBS4-209ENST00000566197 NPATQ14207 1427 aa12.84□□□□□ -0.35
BBS4-209ENST00000566197 MED1Q15648 1581 aaPredicted RBP12.84□□□□□ -0.35
BBS4-209ENST00000566197 SHANK2Q9UPX8 1470 aa12.84□□□□□ -0.35
BBS4-209ENST00000566197 MYO3AQ8NEV4 1616 aa12.84□□□□□ -0.35
BBS4-209ENST00000566197 GGT6Q6P531 493 aa12.83□□□□□ -0.36
BBS4-209ENST00000566197 KDM5DQ9BY66 1539 aa12.83□□□□□ -0.36
BBS4-209ENST00000566197 ZMYM3Q14202 1370 aa12.82□□□□□ -0.36
BBS4-209ENST00000566197 DMRT2Q9Y5R5 561 aa12.82□□□□□ -0.36
BBS4-209ENST00000566197 DUOX2Q9NRD8 1548 aa12.82□□□□□ -0.36
BBS4-209ENST00000566197 CEP152O94986 1710 aa12.82□□□□□ -0.36
BBS4-209ENST00000566197 KIF3BO15066 747 aa12.81□□□□□ -0.36
BBS4-209ENST00000566197 CFAP65Q6ZU64 1925 aaKnown RBP12.81□□□□□ -0.36
BBS4-209ENST00000566197 DAPK1P53355 1430 aa12.8□□□□□ -0.36
BBS4-209ENST00000566197 ABCC5O15440 1437 aa12.79□□□□□ -0.36
BBS4-209ENST00000566197 MROH1Q8NDA8 1641 aa12.79□□□□□ -0.36
BBS4-209ENST00000566197 PTPRKQ15262 1439 aa12.79□□□□□ -0.36
BBS4-209ENST00000566197 CEP170BQ9Y4F5 1589 aaPredicted RBP12.77□□□□□ -0.36
BBS4-209ENST00000566197 DEPDC5O75140 1603 aa12.77□□□□□ -0.36
BBS4-209ENST00000566197 CAMSAP1Q5T5Y3 1602 aa12.77□□□□□ -0.36
BBS4-209ENST00000566197 KIF15Q9NS87 1388 aa12.76□□□□□ -0.37
BBS4-209ENST00000566197 PZPP20742 1482 aa12.76□□□□□ -0.37
BBS4-209ENST00000566197 ABCC3O15438 1527 aa12.76□□□□□ -0.37
BBS4-209ENST00000566197 LTBP4Q8N2S1 1624 aa12.75□□□□□ -0.37
BBS4-209ENST00000566197 ERBINQ96RT1 1412 aa12.75□□□□□ -0.37
BBS4-209ENST00000566197 POLR1AO95602 1720 aaPredicted RBP12.74□□□□□ -0.37
BBS4-209ENST00000566197 PRDM15P57071 1507 aaPredicted RBP12.74□□□□□ -0.37
BBS4-209ENST00000566197 WASHC2CQ9Y4E1 1318 aa12.74□□□□□ -0.37
BBS4-209ENST00000566197 ADGRL2O95490 1459 aa12.73□□□□□ -0.37
BBS4-209ENST00000566197 ANKRD30AQ9BXX3 1397 aa12.73□□□□□ -0.37
BBS4-209ENST00000566197 NCOA1Q15788 1441 aa12.72□□□□□ -0.37
BBS4-209ENST00000566197 FAM50AQ14320 339 aaKnown RBP12.72□□□□□ -0.37
BBS4-209ENST00000566197 A2ML1A8K2U0 1454 aa12.72□□□□□ -0.37
BBS4-209ENST00000566197 RRP7BPQ9NSQ0 103 aa12.71□□□□□ -0.37
BBS4-209ENST00000566197 TNRQ92752 1358 aa12.7□□□□□ -0.38
BBS4-209ENST00000566197 PHF23Q9BUL5 403 aaPredicted RBP12.7□□□□□ -0.38
BBS4-209ENST00000566197 PLA2R1Q13018 1463 aa12.7□□□□□ -0.38
BBS4-209ENST00000566197 PTPRTO14522 1441 aa12.7□□□□□ -0.38
BBS4-209ENST00000566197 CHIC2Q9UKJ5 165 aa12.69□□□□□ -0.38
BBS4-209ENST00000566197 NLRP1Q9C000 1473 aa12.68□□□□□ -0.38
BBS4-209ENST00000566197 ERVK-7P63135 1459 aa12.67□□□□□ -0.38
BBS4-209ENST00000566197 FBXO31Q5XUX0 539 aaPredicted RBP12.67□□□□□ -0.38
BBS4-209ENST00000566197 VWDEQ8N2E2 1590 aa12.67□□□□□ -0.38
BBS4-209ENST00000566197 KANK1Q14678 1352 aa12.67□□□□□ -0.38
BBS4-209ENST00000566197 UBR1Q8IWV7 1749 aa12.66□□□□□ -0.38
BBS4-209ENST00000566197 GCC2Q8IWJ2 1684 aa12.66□□□□□ -0.38
BBS4-209ENST00000566197 UGGT1Q9NYU2 1555 aa12.65□□□□□ -0.38
BBS4-209ENST00000566197 ARHGAP31Q2M1Z3 1444 aa12.65□□□□□ -0.38
BBS4-209ENST00000566197 LMTK2Q8IWU2 1503 aa12.65□□□□□ -0.38
BBS4-209ENST00000566197 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.65□□□□□ -0.38
BBS4-209ENST00000566197 UNC13BO14795 1591 aa12.64□□□□□ -0.39
BBS4-209ENST00000566197 UBAP1LF5GYI3 381 aa12.64□□□□□ -0.39
BBS4-209ENST00000566197 PKD2Q13563 968 aa12.64□□□□□ -0.39
BBS4-209ENST00000566197 TET3O43151 1660 aa12.64□□□□□ -0.39
BBS4-209ENST00000566197 ANKRD50Q9ULJ7 1429 aa12.63□□□□□ -0.39
BBS4-209ENST00000566197 EFCAB6Q5THR3 1501 aa12.63□□□□□ -0.39
BBS4-209ENST00000566197 PPARGC1BQ86YN6 1023 aaKnown RBP12.63□□□□□ -0.39
BBS4-209ENST00000566197 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.63□□□□□ -0.39
BBS4-209ENST00000566197 NEURL4Q96JN8 1562 aa12.63□□□□□ -0.39
BBS4-209ENST00000566197 KDM5AP29375 1690 aaKnown RBP12.63□□□□□ -0.39
BBS4-209ENST00000566197 NCKAP5LQ9HCH0 1330 aa12.62□□□□□ -0.39
BBS4-209ENST00000566197 ROCK1Q13464 1354 aa12.62□□□□□ -0.39
BBS4-209ENST00000566197 PIK3C2BO00750 1634 aa12.62□□□□□ -0.39
BBS4-209ENST00000566197 IQGAP1P46940 1657 aa12.61□□□□□ -0.39
BBS4-209ENST00000566197 IQGAP3Q86VI3 1631 aa12.6□□□□□ -0.39
BBS4-209ENST00000566197 THEMISQ8N1K5 641 aaPredicted RBP12.6□□□□□ -0.39
BBS4-209ENST00000566197 RRBP1Q9P2E9 1410 aaKnown RBP12.6□□□□□ -0.39
BBS4-209ENST00000566197 MYO5BQ9ULV0 1848 aa12.6□□□□□ -0.39
BBS4-209ENST00000566197 SYNMO15061 1565 aa12.59□□□□□ -0.39
BBS4-209ENST00000566197 E9PCH4 1651 aa12.58□□□□□ -0.4
BBS4-209ENST00000566197 HSPA1LP34931 641 aa12.57□□□□□ -0.4
BBS4-209ENST00000566197 RPRD2Q5VT52 1461 aaKnown RBP12.57□□□□□ -0.4
BBS4-209ENST00000566197 ITGAEP38570 1179 aa12.56□□□□□ -0.4
BBS4-209ENST00000566197 ANKLE2Q86XL3 938 aa12.56□□□□□ -0.4
BBS4-209ENST00000566197 MED14O60244 1454 aa12.56□□□□□ -0.4
BBS4-209ENST00000566197 SLIT1O75093 1534 aa12.55□□□□□ -0.4
BBS4-209ENST00000566197 NOS1P29475 1434 aa12.54□□□□□ -0.4
BBS4-209ENST00000566197 ADGRB3O60242 1522 aa12.54□□□□□ -0.4
BBS4-209ENST00000566197 NPHP4O75161 1426 aaPredicted RBP12.54□□□□□ -0.4
BBS4-209ENST00000566197 ARHGAP23Q9P227 1491 aa12.53□□□□□ -0.4
BBS4-209ENST00000566197 SPHKAPQ2M3C7 1700 aa12.53□□□□□ -0.4
BBS4-209ENST00000566197 STRCP1A6NGW2 1772 aa12.52□□□□□ -0.41
BBS4-209ENST00000566197 ZNF335Q9H4Z2 1342 aaPredicted RBP12.52□□□□□ -0.41
BBS4-209ENST00000566197 SCAF11Q99590 1463 aaKnown RBP12.52□□□□□ -0.41
BBS4-209ENST00000566197 CPS1P31327 1500 aa12.51□□□□□ -0.41
BBS4-209ENST00000566197 TMEM131LA2VDJ0 1609 aa12.5□□□□□ -0.41
BBS4-209ENST00000566197 NUP155O75694 1391 aa12.49□□□□□ -0.41
BBS4-209ENST00000566197 SCAF1Q9H7N4 1312 aaKnown RBP12.49□□□□□ -0.41
BBS4-209ENST00000566197 STAG3Q9UJ98 1225 aa12.49□□□□□ -0.41
BBS4-209ENST00000566197 TMEM2Q9UHN6 1383 aa12.48□□□□□ -0.41
BBS4-209ENST00000566197 IDI1Q13907 227 aa12.48□□□□□ -0.41
BBS4-209ENST00000566197 SLC52A1Q9NWF4 448 aa12.48□□□□□ -0.41
BBS4-209ENST00000566197 NAIPQ13075 1403 aa12.47□□□□□ -0.41
BBS4-209ENST00000566197 EID1Q9Y6B2 187 aa12.47□□□□□ -0.41
BBS4-209ENST00000566197 KIF1BO60333 1816 aa12.46□□□□□ -0.41
BBS4-209ENST00000566197 TXNDC2Q86VQ3 553 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms