RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 PREX2Q70Z35 1606 aa18.53■□□□□ 0.56
CAPN3-215ENST00000565559 GGT6Q6P531 493 aa18.51■□□□□ 0.55
CAPN3-215ENST00000565559 SAMD9LQ8IVG5 1584 aa18.5■□□□□ 0.55
CAPN3-215ENST00000565559 ZNF777Q9ULD5 760 aaPredicted RBP18.48■□□□□ 0.55
CAPN3-215ENST00000565559 DNMT1P26358 1616 aaKnown RBP18.48■□□□□ 0.55
CAPN3-215ENST00000565559 ANKLE2Q86XL3 938 aa18.47■□□□□ 0.55
CAPN3-215ENST00000565559 A2MP01023 1474 aa18.46■□□□□ 0.55
CAPN3-215ENST00000565559 RGS17Q9UGC6 210 aaPredicted RBP18.45■□□□□ 0.54
CAPN3-215ENST00000565559 NEURL4Q96JN8 1562 aa18.45■□□□□ 0.54
CAPN3-215ENST00000565559 POLR1AO95602 1720 aaPredicted RBP18.45■□□□□ 0.54
CAPN3-215ENST00000565559 ATP7AQ04656 1500 aa18.44■□□□□ 0.54
CAPN3-215ENST00000565559 PLXNC1O60486 1568 aa18.43■□□□□ 0.54
CAPN3-215ENST00000565559 ALKQ9UM73 1620 aa18.43■□□□□ 0.54
CAPN3-215ENST00000565559 VWDEQ8N2E2 1590 aa18.42■□□□□ 0.54
CAPN3-215ENST00000565559 ARHGAP35Q9NRY4 1499 aa18.42■□□□□ 0.54
CAPN3-215ENST00000565559 UBTFP17480 764 aaKnown RBP18.42■□□□□ 0.54
CAPN3-215ENST00000565559 SYCP2Q9BX26 1530 aa18.42■□□□□ 0.54
CAPN3-215ENST00000565559 TNRQ92752 1358 aa18.42■□□□□ 0.54
CAPN3-215ENST00000565559 HNRNPMP52272 730 aaKnown RBP eCLIP18.41■□□□□ 0.54
CAPN3-215ENST00000565559 THEMISQ8N1K5 641 aaPredicted RBP18.4■□□□□ 0.54
CAPN3-215ENST00000565559 NPHP4O75161 1426 aaPredicted RBP18.4■□□□□ 0.54
CAPN3-215ENST00000565559 CCDC18Q5T9S5 1454 aa18.39■□□□□ 0.54
CAPN3-215ENST00000565559 SPINK5Q9NQ38 1064 aaPredicted RBP18.39■□□□□ 0.53
CAPN3-215ENST00000565559 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.39■□□□□ 0.53
CAPN3-215ENST00000565559 SAMD1Q6SPF0 538 aaPredicted RBP18.38■□□□□ 0.53
CAPN3-215ENST00000565559 PLEKHH2Q8IVE3 1493 aa18.38■□□□□ 0.53
CAPN3-215ENST00000565559 RNF17Q9BXT8 1623 aaKnown RBP18.38■□□□□ 0.53
CAPN3-215ENST00000565559 INO80Q9ULG1 1556 aaPredicted RBP18.37■□□□□ 0.53
CAPN3-215ENST00000565559 CDC42BPAQ5VT25 1732 aa18.37■□□□□ 0.53
CAPN3-215ENST00000565559 MED14O60244 1454 aa18.36■□□□□ 0.53
CAPN3-215ENST00000565559 KIAA1107Q9UPP5 1409 aa18.36■□□□□ 0.53
CAPN3-215ENST00000565559 LRRC7Q96NW7 1537 aa18.35■□□□□ 0.53
CAPN3-215ENST00000565559 FBXO31Q5XUX0 539 aaPredicted RBP18.35■□□□□ 0.53
CAPN3-215ENST00000565559 FAM135AQ9P2D6 1515 aa18.34■□□□□ 0.53
CAPN3-215ENST00000565559 LRRIQ1Q96JM4 1722 aa18.34■□□□□ 0.53
CAPN3-215ENST00000565559 POTEAQ6S8J7 498 aa18.33■□□□□ 0.52
CAPN3-215ENST00000565559 SYNMO15061 1565 aa18.33■□□□□ 0.52
CAPN3-215ENST00000565559 DEPDC5O75140 1603 aa18.32■□□□□ 0.52
CAPN3-215ENST00000565559 CFDP1Q9UEE9 299 aaPredicted RBP18.32■□□□□ 0.52
CAPN3-215ENST00000565559 GPATCH8Q9UKJ3 1502 aaKnown RBP18.32■□□□□ 0.52
CAPN3-215ENST00000565559 PZPP20742 1482 aa18.32■□□□□ 0.52
CAPN3-215ENST00000565559 NLRP1Q9C000 1473 aa18.32■□□□□ 0.52
CAPN3-215ENST00000565559 UGGT1Q9NYU2 1555 aa18.31■□□□□ 0.52
CAPN3-215ENST00000565559 ADGBQ8N7X0 1667 aa18.31■□□□□ 0.52
CAPN3-215ENST00000565559 CASKIN1Q8WXD9 1431 aa18.31■□□□□ 0.52
CAPN3-215ENST00000565559 CAPN15O75808 1086 aa18.3■□□□□ 0.52
CAPN3-215ENST00000565559 IQGAP1P46940 1657 aa18.29■□□□□ 0.52
CAPN3-215ENST00000565559 MIA2Q96PC5 1412 aa18.29■□□□□ 0.52
CAPN3-215ENST00000565559 WASHC2CQ9Y4E1 1318 aa18.27■□□□□ 0.52
CAPN3-215ENST00000565559 KDM5DQ9BY66 1539 aa18.27■□□□□ 0.51
CAPN3-215ENST00000565559 DHX29Q7Z478 1369 aaKnown RBP18.26■□□□□ 0.51
CAPN3-215ENST00000565559 CCNB3Q8WWL7 1395 aa18.26■□□□□ 0.51
CAPN3-215ENST00000565559 KIF3BO15066 747 aa18.25■□□□□ 0.51
CAPN3-215ENST00000565559 APLP2Q06481 763 aa18.24■□□□□ 0.51
CAPN3-215ENST00000565559 FAM135BQ49AJ0 1406 aa18.23■□□□□ 0.51
CAPN3-215ENST00000565559 ATF5Q9Y2D1 282 aaPredicted RBP18.22■□□□□ 0.51
CAPN3-215ENST00000565559 RTEL1-TNFRSF6BF6WH68 1400 aa18.22■□□□□ 0.51
CAPN3-215ENST00000565559 STRCP1A6NGW2 1772 aa18.22■□□□□ 0.51
CAPN3-215ENST00000565559 FYCO1Q9BQS8 1478 aa18.19■□□□□ 0.5
CAPN3-215ENST00000565559 SETD1AO15047 1707 aaKnown RBP18.18■□□□□ 0.5
CAPN3-215ENST00000565559 UPF1Q92900 1129 aaKnown RBP eCLIP18.14■□□□□ 0.49
CAPN3-215ENST00000565559 ZNF644Q9H582 1327 aaPredicted RBP18.14■□□□□ 0.49
CAPN3-215ENST00000565559 SCAF11Q99590 1463 aaKnown RBP18.14■□□□□ 0.49
CAPN3-215ENST00000565559 MBD5Q9P267 1494 aa18.14■□□□□ 0.49
CAPN3-215ENST00000565559 ZC3H13Q5T200 1668 aaKnown RBP18.12■□□□□ 0.49
CAPN3-215ENST00000565559 MTUS2Q5JR59 1369 aa18.11■□□□□ 0.49
CAPN3-215ENST00000565559 TXNDC2Q86VQ3 553 aa18.1■□□□□ 0.49
CAPN3-215ENST00000565559 EID1Q9Y6B2 187 aa18.09■□□□□ 0.49
CAPN3-215ENST00000565559 LRRC9Q6ZRR7 1453 aa18.08■□□□□ 0.49
CAPN3-215ENST00000565559 TMEM94Q12767 1356 aa18.08■□□□□ 0.49
CAPN3-215ENST00000565559 JCADQ9P266 1359 aa18.08■□□□□ 0.49
CAPN3-215ENST00000565559 ATXN8OSP0DMR3 200 aa18.08■□□□□ 0.48
CAPN3-215ENST00000565559 CCDC141Q6ZP82 1450 aa18.07■□□□□ 0.48
CAPN3-215ENST00000565559 ROBO1Q9Y6N7 1651 aa18.07■□□□□ 0.48
CAPN3-215ENST00000565559 ZNF772Q68DY9 489 aaPredicted RBP18.07■□□□□ 0.48
CAPN3-215ENST00000565559 ERVK-7P63135 1459 aa18.07■□□□□ 0.48
CAPN3-215ENST00000565559 RSPH4AQ5TD94 716 aa18.06■□□□□ 0.48
CAPN3-215ENST00000565559 TRIM52Q96A61 297 aa18.06■□□□□ 0.48
CAPN3-215ENST00000565559 ZNF219Q9P2Y4 722 aaPredicted RBP18.06■□□□□ 0.48
CAPN3-215ENST00000565559 LTKP29376 864 aa18.05■□□□□ 0.48
CAPN3-215ENST00000565559 MEX3CQ5U5Q3 659 aaKnown RBP18.05■□□□□ 0.48
CAPN3-215ENST00000565559 XIRP1Q702N8 1843 aaKnown RBP18.05■□□□□ 0.48
CAPN3-215ENST00000565559 TIAM1Q13009 1591 aa18.04■□□□□ 0.48
CAPN3-215ENST00000565559 ABCC3O15438 1527 aa18.03■□□□□ 0.48
CAPN3-215ENST00000565559 SLIT1O75093 1534 aa18.03■□□□□ 0.48
CAPN3-215ENST00000565559 ARHGAP23Q9P227 1491 aa18.02■□□□□ 0.48
CAPN3-215ENST00000565559 PROSER2Q86WR7 435 aaPredicted RBP18.02■□□□□ 0.48
CAPN3-215ENST00000565559 UBR1Q8IWV7 1749 aa18.01■□□□□ 0.47
CAPN3-215ENST00000565559 TSPY4P0CV99 314 aa18.01■□□□□ 0.47
CAPN3-215ENST00000565559 TSPY10P0CW01 314 aa18.01■□□□□ 0.47
CAPN3-215ENST00000565559 KCNA6P17658 529 aa18.01■□□□□ 0.47
CAPN3-215ENST00000565559 NCOA2Q15596 1464 aa18.01■□□□□ 0.47
CAPN3-215ENST00000565559 MSH6P52701 1360 aa18■□□□□ 0.47
CAPN3-215ENST00000565559 SPATA31A6Q5VVP1 1343 aa17.99■□□□□ 0.47
CAPN3-215ENST00000565559 RXRBP28702 533 aa17.99■□□□□ 0.47
CAPN3-215ENST00000565559 DSG3P32926 999 aa17.99■□□□□ 0.47
CAPN3-215ENST00000565559 ABCB7O75027 752 aa17.98■□□□□ 0.47
CAPN3-215ENST00000565559 SLAIN2Q9P270 581 aa17.98■□□□□ 0.47
CAPN3-215ENST00000565559 PHLPP1O60346 1717 aa17.98■□□□□ 0.47
CAPN3-215ENST00000565559 MAP3K1Q13233 1512 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms