RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 JPH4Q96JJ6 628 aa8.23□□□□□ -1.09
CAPN3-214ENST00000565274 ZBED2Q9BTP6 218 aa8.23□□□□□ -1.09
CAPN3-214ENST00000565274 ANO8Q9HCE9 1232 aaPredicted RBP8.23□□□□□ -1.09
CAPN3-214ENST00000565274 MRPL50Q8N5N7 158 aaKnown RBP8.22□□□□□ -1.09
CAPN3-214ENST00000565274 WNT2BQ93097 391 aa8.22□□□□□ -1.09
CAPN3-214ENST00000565274 SLC4A5Q9BY07 1137 aa8.21□□□□□ -1.1
CAPN3-214ENST00000565274 BCL11AQ9H165 835 aa8.21□□□□□ -1.1
CAPN3-214ENST00000565274 EMILIN3Q9NT22 766 aa8.21□□□□□ -1.1
CAPN3-214ENST00000565274 BHMG1C9JSJ3 638 aaPredicted RBP8.2□□□□□ -1.1
CAPN3-214ENST00000565274 THSD4Q6ZMP0 1018 aa8.2□□□□□ -1.1
CAPN3-214ENST00000565274 CADPS2Q86UW7 1296 aa8.19□□□□□ -1.1
CAPN3-214ENST00000565274 MFSD10Q14728 455 aa8.18□□□□□ -1.1
CAPN3-214ENST00000565274 PROX2Q3B8N5 592 aa8.17□□□□□ -1.1
CAPN3-214ENST00000565274 NBPF3Q9H094 633 aa8.17□□□□□ -1.1
CAPN3-214ENST00000565274 PCDHGA10Q9Y5H3 936 aa8.17□□□□□ -1.1
CAPN3-214ENST00000565274 COL9A1P20849 921 aa8.15□□□□□ -1.1
CAPN3-214ENST00000565274 PPP1R3GB7ZBB8 358 aa8.13□□□□□ -1.11
CAPN3-214ENST00000565274 HRCP23327 699 aa8.13□□□□□ -1.11
CAPN3-214ENST00000565274 TYW1BQ6NUM6 668 aa8.13□□□□□ -1.11
CAPN3-214ENST00000565274 PODXL2Q9NZ53 605 aa8.12□□□□□ -1.11
CAPN3-214ENST00000565274 DPYSL4O14531 572 aa8.11□□□□□ -1.11
CAPN3-214ENST00000565274 ANKK1Q8NFD2 765 aa8.11□□□□□ -1.11
CAPN3-214ENST00000565274 RBM33Q96EV2 1170 aaKnown RBP8.11□□□□□ -1.11
CAPN3-214ENST00000565274 RABGEF1Q9UJ41 708 aa8.11□□□□□ -1.11
CAPN3-214ENST00000565274 PHF14O94880 888 aa8.1□□□□□ -1.11
CAPN3-214ENST00000565274 BCAMP50895 628 aa8.1□□□□□ -1.11
CAPN3-214ENST00000565274 FBXW7Q969H0 707 aa8.1□□□□□ -1.11
CAPN3-214ENST00000565274 KIAA1468Q9P260 1216 aa8.1□□□□□ -1.11
CAPN3-214ENST00000565274 A0A0G2JS52 829 aa8.08□□□□□ -1.12
CAPN3-214ENST00000565274 DDX12PQ92771 950 aa8.08□□□□□ -1.12
CAPN3-214ENST00000565274 SEPT9Q9UHD8 586 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-214ENST00000565274 C6orf132Q5T0Z8 1188 aa8.07□□□□□ -1.12
CAPN3-214ENST00000565274 IFFO2Q5TF58 517 aa8.06□□□□□ -1.12
CAPN3-214ENST00000565274 FAM9AQ8IZU1 332 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-214ENST00000565274 ABCC9O60706 1549 aa8.06□□□□□ -1.12
CAPN3-214ENST00000565274 TPRNQ4KMQ1 711 aa8.05□□□□□ -1.12
CAPN3-214ENST00000565274 BCANQ96GW7 911 aa8.05□□□□□ -1.12
CAPN3-214ENST00000565274 ZFRQ96KR1 1074 aaKnown RBP8.05□□□□□ -1.12
CAPN3-214ENST00000565274 EPAS1Q99814 870 aa8.05□□□□□ -1.12
CAPN3-214ENST00000565274 IRX2Q9BZI1 471 aaPredicted RBP8.05□□□□□ -1.12
CAPN3-214ENST00000565274 CAMK2BQ13554 666 aa8.04□□□□□ -1.12
CAPN3-214ENST00000565274 LAPTM4BQ86VI4 370 aa8.04□□□□□ -1.12
CAPN3-214ENST00000565274 SOWAHBA6NEL2 793 aa8.03□□□□□ -1.12
CAPN3-214ENST00000565274 WBP1LQ9NX94 342 aa8.03□□□□□ -1.12
CAPN3-214ENST00000565274 RGS20O76081 388 aa8.02□□□□□ -1.13
CAPN3-214ENST00000565274 TRIM6-TRIM34B2RNG4 842 aa8.01□□□□□ -1.13
CAPN3-214ENST00000565274 NBR1Q14596 966 aa8.01□□□□□ -1.13
CAPN3-214ENST00000565274 RSF1Q96T23 1441 aaPredicted RBP8.01□□□□□ -1.13
CAPN3-214ENST00000565274 NACADO15069 1562 aa8.01□□□□□ -1.13
CAPN3-214ENST00000565274 MAP3K7O43318 606 aa8□□□□□ -1.13
CAPN3-214ENST00000565274 GTF3C3Q9Y5Q9 886 aa8□□□□□ -1.13
CAPN3-214ENST00000565274 TSR1Q2NL82 804 aaKnown RBP7.99□□□□□ -1.13
CAPN3-214ENST00000565274 BBXQ8WY36 941 aaPredicted RBP7.99□□□□□ -1.13
CAPN3-214ENST00000565274 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.99□□□□□ -1.13
CAPN3-214ENST00000565274 HPS5Q9UPZ3 1129 aa7.99□□□□□ -1.13
CAPN3-214ENST00000565274 ONECUT3O60422 494 aaPredicted RBP7.98□□□□□ -1.13
CAPN3-214ENST00000565274 ITGBL1O95965 494 aaPredicted RBP7.98□□□□□ -1.13
CAPN3-214ENST00000565274 FAM98CQ17RN3 349 aaKnown RBP7.98□□□□□ -1.13
CAPN3-214ENST00000565274 NPM2Q86SE8 214 aaKnown RBP7.98□□□□□ -1.13
CAPN3-214ENST00000565274 LRCH3Q96II8 777 aa7.98□□□□□ -1.13
CAPN3-214ENST00000565274 KCNC4Q03721 635 aa7.97□□□□□ -1.13
CAPN3-214ENST00000565274 EN1Q05925 392 aaPredicted RBP7.96□□□□□ -1.14
CAPN3-214ENST00000565274 PACS2Q86VP3 889 aa7.96□□□□□ -1.14
CAPN3-214ENST00000565274 TSR3Q9UJK0 312 aaKnown RBP7.96□□□□□ -1.14
CAPN3-214ENST00000565274 TSKSQ9UJT2 592 aa7.96□□□□□ -1.14
CAPN3-214ENST00000565274 SMAPO00193 183 aa7.95□□□□□ -1.14
CAPN3-214ENST00000565274 NYAP1Q6ZVC0 841 aa7.95□□□□□ -1.14
CAPN3-214ENST00000565274 GRXCR2A6NFK2 248 aa7.94□□□□□ -1.14
CAPN3-214ENST00000565274 SPRYD3Q8NCJ5 442 aa7.94□□□□□ -1.14
CAPN3-214ENST00000565274 RB1CC1Q8TDY2 1594 aa7.93□□□□□ -1.14
CAPN3-214ENST00000565274 PDIA6Q15084 440 aa7.93□□□□□ -1.14
CAPN3-214ENST00000565274 PPP4CP60510 307 aa7.92□□□□□ -1.14
CAPN3-214ENST00000565274 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.92□□□□□ -1.14
CAPN3-214ENST00000565274 SPDYE16A6NNV3 312 aaPredicted RBP7.91□□□□□ -1.14
CAPN3-214ENST00000565274 CDCA7LQ96GN5 454 aa7.91□□□□□ -1.14
CAPN3-214ENST00000565274 CFAP44Q96MT7 982 aa7.91□□□□□ -1.14
CAPN3-214ENST00000565274 WDR70Q9NW82 654 aa7.91□□□□□ -1.14
CAPN3-214ENST00000565274 PRIM1P49642 420 aaKnown RBP7.9□□□□□ -1.14
CAPN3-214ENST00000565274 E2F4Q16254 413 aa7.9□□□□□ -1.14
CAPN3-214ENST00000565274 Q6ZNB5 142 aa7.9□□□□□ -1.14
CAPN3-214ENST00000565274 SAMD7Q7Z3H4 446 aa7.9□□□□□ -1.14
CAPN3-214ENST00000565274 FAM198AQ9UFP1 575 aa7.9□□□□□ -1.14
CAPN3-214ENST00000565274 RNF40O75150 1001 aa7.89□□□□□ -1.15
CAPN3-214ENST00000565274 PRSS12P56730 875 aa7.89□□□□□ -1.15
CAPN3-214ENST00000565274 PAXIP1Q6ZW49 1069 aaPredicted RBP7.89□□□□□ -1.15
CAPN3-214ENST00000565274 PCGF6Q9BYE7 350 aa7.89□□□□□ -1.15
CAPN3-214ENST00000565274 PNMA3Q9UL41 463 aa7.89□□□□□ -1.15
CAPN3-214ENST00000565274 SCRIBQ14160 1630 aa7.89□□□□□ -1.15
CAPN3-214ENST00000565274 C3orf80F5H4A9 247 aa7.88□□□□□ -1.15
CAPN3-214ENST00000565274 TATDN2Q93075 761 aa7.87□□□□□ -1.15
CAPN3-214ENST00000565274 CDHR5Q9HBB8 845 aa7.87□□□□□ -1.15
CAPN3-214ENST00000565274 PLCB2Q00722 1185 aa7.86□□□□□ -1.15
CAPN3-214ENST00000565274 NBPF26B4DH59 902 aa7.85□□□□□ -1.15
CAPN3-214ENST00000565274 C14orf37Q86TY3 774 aa7.85□□□□□ -1.15
CAPN3-214ENST00000565274 UBE2Q2Q8WVN8 375 aa7.85□□□□□ -1.15
CAPN3-214ENST00000565274 PDIA4P13667 645 aaKnown RBP7.84□□□□□ -1.15
CAPN3-214ENST00000565274 TJAP1Q5JTD0 557 aa7.84□□□□□ -1.15
CAPN3-214ENST00000565274 NUDT18Q6ZVK8 323 aa7.84□□□□□ -1.15
CAPN3-214ENST00000565274 CERKQ8TCT0 537 aa7.84□□□□□ -1.15
CAPN3-214ENST00000565274 HDGFP51858 240 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms