RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 MFSD10Q14728 455 aa13.86□□□□□ -0.19
CHD9-214ENST00000565119 LAPTM4BQ86VI4 370 aa13.84□□□□□ -0.19
CHD9-214ENST00000565119 GTPBP6O43824 516 aaPredicted RBP13.83□□□□□ -0.2
CHD9-214ENST00000565119 Q6ZNB5 142 aa13.83□□□□□ -0.2
CHD9-214ENST00000565119 KIAA1468Q9P260 1216 aa13.83□□□□□ -0.2
CHD9-214ENST00000565119 TYW1BQ6NUM6 668 aa13.82□□□□□ -0.2
CHD9-214ENST00000565119 ZFRQ96KR1 1074 aaKnown RBP13.82□□□□□ -0.2
CHD9-214ENST00000565119 WBP1LQ9NX94 342 aa13.82□□□□□ -0.2
CHD9-214ENST00000565119 FBXW7Q969H0 707 aa13.81□□□□□ -0.2
CHD9-214ENST00000565119 PHF14O94880 888 aa13.79□□□□□ -0.2
CHD9-214ENST00000565119 NYAP1Q6ZVC0 841 aa13.79□□□□□ -0.2
CHD9-214ENST00000565119 KCNC4Q03721 635 aa13.78□□□□□ -0.2
CHD9-214ENST00000565119 SEPT9Q9UHD8 586 aaPredicted RBP13.78□□□□□ -0.2
CHD9-214ENST00000565119 ONECUT3O60422 494 aaPredicted RBP13.74□□□□□ -0.21
CHD9-214ENST00000565119 C6orf132Q5T0Z8 1188 aa13.73□□□□□ -0.21
CHD9-214ENST00000565119 LCE2BO14633 110 aa13.7□□□□□ -0.22
CHD9-214ENST00000565119 CADPS2Q86UW7 1296 aa13.7□□□□□ -0.22
CHD9-214ENST00000565119 TRIM6-TRIM34B2RNG4 842 aa13.69□□□□□ -0.22
CHD9-214ENST00000565119 FAM98CQ17RN3 349 aaKnown RBP13.69□□□□□ -0.22
CHD9-214ENST00000565119 TSR3Q9UJK0 312 aaKnown RBP13.68□□□□□ -0.22
CHD9-214ENST00000565119 EPAS1Q99814 870 aa13.67□□□□□ -0.22
CHD9-214ENST00000565119 HPS5Q9UPZ3 1129 aa13.67□□□□□ -0.22
CHD9-214ENST00000565119 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.66□□□□□ -0.22
CHD9-214ENST00000565119 LRCH3Q96II8 777 aa13.65□□□□□ -0.22
CHD9-214ENST00000565119 RBM33Q96EV2 1170 aaKnown RBP13.64□□□□□ -0.23
CHD9-214ENST00000565119 LAPTM4AQ15012 233 aa13.63□□□□□ -0.23
CHD9-214ENST00000565119 DPYSL4O14531 572 aa13.62□□□□□ -0.23
CHD9-214ENST00000565119 CAMK2BQ13554 666 aa13.61□□□□□ -0.23
CHD9-214ENST00000565119 GFRA3O60609 400 aa13.6□□□□□ -0.23
CHD9-214ENST00000565119 TRAF7Q6Q0C0 670 aa13.58□□□□□ -0.24
CHD9-214ENST00000565119 DDX12PQ92771 950 aa13.57□□□□□ -0.24
CHD9-214ENST00000565119 TSKSQ9UJT2 592 aa13.57□□□□□ -0.24
CHD9-214ENST00000565119 TJAP1Q5JTD0 557 aa13.55□□□□□ -0.24
CHD9-214ENST00000565119 PPP4CP60510 307 aa13.53□□□□□ -0.24
CHD9-214ENST00000565119 TSR1Q2NL82 804 aaKnown RBP13.52□□□□□ -0.25
CHD9-214ENST00000565119 PACS2Q86VP3 889 aa13.52□□□□□ -0.25
CHD9-214ENST00000565119 PRKD2Q9BZL6 878 aa13.52□□□□□ -0.25
CHD9-214ENST00000565119 EN1Q05925 392 aaPredicted RBP13.5□□□□□ -0.25
CHD9-214ENST00000565119 SAMD7Q7Z3H4 446 aa13.48□□□□□ -0.25
CHD9-214ENST00000565119 SMAPO00193 183 aa13.47□□□□□ -0.25
CHD9-214ENST00000565119 NRG2O14511 850 aaPredicted RBP13.47□□□□□ -0.25
CHD9-214ENST00000565119 MAP3K7O43318 606 aa13.47□□□□□ -0.25
CHD9-214ENST00000565119 NBR1Q14596 966 aa13.47□□□□□ -0.25
CHD9-214ENST00000565119 MTRQ99707 1265 aa13.46□□□□□ -0.25
CHD9-214ENST00000565119 FAM198AQ9UFP1 575 aa13.46□□□□□ -0.25
CHD9-214ENST00000565119 PPP1R18Q6NYC8 613 aa13.45□□□□□ -0.26
CHD9-214ENST00000565119 C3orf80F5H4A9 247 aa13.44□□□□□ -0.26
CHD9-214ENST00000565119 CDCA7LQ96GN5 454 aa13.43□□□□□ -0.26
CHD9-214ENST00000565119 IL21Q9HBE4 155 aa13.43□□□□□ -0.26
CHD9-214ENST00000565119 V9GY48 417 aaPredicted RBP13.42□□□□□ -0.26
CHD9-214ENST00000565119 ZNF516Q92618 1163 aa13.41□□□□□ -0.26
CHD9-214ENST00000565119 PRSS12P56730 875 aa13.4□□□□□ -0.26
CHD9-214ENST00000565119 PDIA6Q15084 440 aa13.4□□□□□ -0.26
CHD9-214ENST00000565119 DCAF8L2P0C7V8 631 aa13.39□□□□□ -0.27
CHD9-214ENST00000565119 PRIM1P49642 420 aaKnown RBP13.38□□□□□ -0.27
CHD9-214ENST00000565119 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.38□□□□□ -0.27
CHD9-214ENST00000565119 TATDN2Q93075 761 aa13.36□□□□□ -0.27
CHD9-214ENST00000565119 APLP1P51693 650 aa13.34□□□□□ -0.27
CHD9-214ENST00000565119 NKX2-3Q8TAU0 364 aa13.34□□□□□ -0.27
CHD9-214ENST00000565119 PNMA3Q9UL41 463 aa13.34□□□□□ -0.27
CHD9-214ENST00000565119 PDZRN3Q9UPQ7 1066 aa13.33□□□□□ -0.28
CHD9-214ENST00000565119 NBPF26B4DH59 902 aa13.32□□□□□ -0.28
CHD9-214ENST00000565119 ZNF787Q6DD87 383 aa13.32□□□□□ -0.28
CHD9-214ENST00000565119 SPDYE16A6NNV3 312 aaPredicted RBP13.31□□□□□ -0.28
CHD9-214ENST00000565119 CERKQ8TCT0 537 aa13.31□□□□□ -0.28
CHD9-214ENST00000565119 RNF40O75150 1001 aa13.29□□□□□ -0.28
CHD9-214ENST00000565119 NUDT18Q6ZVK8 323 aa13.28□□□□□ -0.28
CHD9-214ENST00000565119 CDHR5Q9HBB8 845 aa13.26□□□□□ -0.29
CHD9-214ENST00000565119 GRXCR2A6NFK2 248 aa13.24□□□□□ -0.29
CHD9-214ENST00000565119 ZNF775Q96BV0 537 aaPredicted RBP13.24□□□□□ -0.29
CHD9-214ENST00000565119 HDGFP51858 240 aaKnown RBP13.23□□□□□ -0.29
CHD9-214ENST00000565119 COPS2P61201 443 aa13.23□□□□□ -0.29
CHD9-214ENST00000565119 OSBPP22059 807 aa13.2□□□□□ -0.3
CHD9-214ENST00000565119 GGCXP38435 758 aa13.2□□□□□ -0.3
CHD9-214ENST00000565119 SWT1Q5T5J6 900 aaKnown RBP13.19□□□□□ -0.3
CHD9-214ENST00000565119 RBM27Q9P2N5 1060 aaKnown RBP13.19□□□□□ -0.3
CHD9-214ENST00000565119 TRIM67Q6ZTA4 783 aa13.18□□□□□ -0.3
CHD9-214ENST00000565119 TMUB1Q9BVT8 246 aa13.18□□□□□ -0.3
CHD9-214ENST00000565119 TTC13Q8NBP0 860 aa13.17□□□□□ -0.3
CHD9-214ENST00000565119 ARIH1Q9Y4X5 557 aaPredicted RBP13.16□□□□□ -0.3
CHD9-214ENST00000565119 ZPR1O75312 459 aa13.15□□□□□ -0.3
CHD9-214ENST00000565119 E2F4Q16254 413 aa13.15□□□□□ -0.3
CHD9-214ENST00000565119 SLF2Q8IX21 1173 aa13.15□□□□□ -0.3
CHD9-214ENST00000565119 EMID1Q96A84 441 aaPredicted RBP13.15□□□□□ -0.3
CHD9-214ENST00000565119 NECTIN2Q92692 538 aa13.14□□□□□ -0.31
CHD9-214ENST00000565119 PADI6Q6TGC4 694 aa13.12□□□□□ -0.31
CHD9-214ENST00000565119 NPDC1Q9NQX5 325 aaPredicted RBP13.12□□□□□ -0.31
CHD9-214ENST00000565119 RNF223E7ERA6 249 aa13.1□□□□□ -0.31
CHD9-214ENST00000565119 SLC19A1P41440 591 aa13.1□□□□□ -0.31
CHD9-214ENST00000565119 MYT1Q01538 1121 aa13.08□□□□□ -0.32
CHD9-214ENST00000565119 POTECB2RU33 542 aa13.07□□□□□ -0.32
CHD9-214ENST00000565119 BBXQ8WY36 941 aaPredicted RBP13.07□□□□□ -0.32
CHD9-214ENST00000565119 EYA1Q99502 592 aa13.07□□□□□ -0.32
CHD9-214ENST00000565119 BLOC1S3Q6QNY0 202 aa13.06□□□□□ -0.32
CHD9-214ENST00000565119 PCDHB3Q9Y5E6 796 aa13.06□□□□□ -0.32
CHD9-214ENST00000565119 PKDCCQ504Y2 493 aa13.05□□□□□ -0.32
CHD9-214ENST00000565119 DGAT1O75907 488 aa13.04□□□□□ -0.32
CHD9-214ENST00000565119 SPRYD7Q5W111 196 aa13.04□□□□□ -0.32
CHD9-214ENST00000565119 TLL1O43897 1013 aa13.02□□□□□ -0.33
CHD9-214ENST00000565119 PRR14Q9BWN1 585 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms