RNA–Protein interactions for RNA: ENST00000565018.6

TCF4-226, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,357 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-226ENST00000565018 PLA2R1Q13018 1463 aa12.82□□□□□ -0.36
TCF4-226ENST00000565018 KDM5CP41229 1560 aa12.82□□□□□ -0.36
TCF4-226ENST00000565018 CNTLNQ9NXG0 1405 aa12.82□□□□□ -0.36
TCF4-226ENST00000565018 ARID4BQ4LE39 1312 aaPredicted RBP12.81□□□□□ -0.36
TCF4-226ENST00000565018 CCDC144AA2RUR9 1427 aa12.81□□□□□ -0.36
TCF4-226ENST00000565018 SPAG9O60271 1321 aaKnown RBP12.8□□□□□ -0.36
TCF4-226ENST00000565018 ATP7AQ04656 1500 aa12.8□□□□□ -0.36
TCF4-226ENST00000565018 EIF2AK4Q9P2K8 1649 aaKnown RBP12.8□□□□□ -0.36
TCF4-226ENST00000565018 CFAP74Q9C0B2 1584 aa12.79□□□□□ -0.36
TCF4-226ENST00000565018 ADGRL1O94910 1474 aa12.79□□□□□ -0.36
TCF4-226ENST00000565018 VWDEQ8N2E2 1590 aa12.79□□□□□ -0.36
TCF4-226ENST00000565018 USP47Q96K76 1375 aa12.78□□□□□ -0.36
TCF4-226ENST00000565018 LAMC1P11047 1609 aa12.77□□□□□ -0.37
TCF4-226ENST00000565018 SCAPERQ9BY12 1400 aa12.76□□□□□ -0.37
TCF4-226ENST00000565018 C11orf95C9JLR9 678 aaPredicted RBP12.76□□□□□ -0.37
TCF4-226ENST00000565018 MYT1Q01538 1121 aa12.76□□□□□ -0.37
TCF4-226ENST00000565018 KIF7Q2M1P5 1343 aa12.75□□□□□ -0.37
TCF4-226ENST00000565018 TRPM1Q7Z4N2 1603 aa12.75□□□□□ -0.37
TCF4-226ENST00000565018 PRAG1Q86YV5 1406 aa12.75□□□□□ -0.37
TCF4-226ENST00000565018 PRDM15P57071 1507 aaPredicted RBP12.75□□□□□ -0.37
TCF4-226ENST00000565018 NEURL4Q96JN8 1562 aa12.75□□□□□ -0.37
TCF4-226ENST00000565018 TET3O43151 1660 aa12.75□□□□□ -0.37
TCF4-226ENST00000565018 GPRASP1Q5JY77 1395 aa12.75□□□□□ -0.37
TCF4-226ENST00000565018 ZNF518AQ6AHZ1 1483 aa12.75□□□□□ -0.37
TCF4-226ENST00000565018 TRPM2O94759 1503 aa12.75□□□□□ -0.37
TCF4-226ENST00000565018 NPM1P06748 294 aaKnown RBP eCLIP12.74□□□□□ -0.37
TCF4-226ENST00000565018 AFAP1Q8N556 730 aa12.74□□□□□ -0.37
TCF4-226ENST00000565018 PTPRTO14522 1441 aa12.74□□□□□ -0.37
TCF4-226ENST00000565018 A2MP01023 1474 aa12.74□□□□□ -0.37
TCF4-226ENST00000565018 E9PCH4 1651 aa12.74□□□□□ -0.37
TCF4-226ENST00000565018 BCORL1Q5H9F3 1711 aa12.74□□□□□ -0.37
TCF4-226ENST00000565018 DHX29Q7Z478 1369 aaKnown RBP12.73□□□□□ -0.37
TCF4-226ENST00000565018 ROCK2O75116 1388 aaKnown RBP12.72□□□□□ -0.37
TCF4-226ENST00000565018 KIDINS220Q9ULH0 1771 aa12.72□□□□□ -0.37
TCF4-226ENST00000565018 MROH1Q8NDA8 1641 aa12.72□□□□□ -0.37
TCF4-226ENST00000565018 DCAF11Q8TEB1 546 aa12.71□□□□□ -0.38
TCF4-226ENST00000565018 STAC3Q96MF2 364 aa12.71□□□□□ -0.38
TCF4-226ENST00000565018 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.71□□□□□ -0.38
TCF4-226ENST00000565018 LMTK2Q8IWU2 1503 aa12.71□□□□□ -0.38
TCF4-226ENST00000565018 MLH3Q9UHC1 1453 aa12.71□□□□□ -0.38
TCF4-226ENST00000565018 SPHKAPQ2M3C7 1700 aa12.71□□□□□ -0.38
TCF4-226ENST00000565018 CD109Q6YHK3 1445 aa12.7□□□□□ -0.38
TCF4-226ENST00000565018 NEO1Q92859 1461 aa12.7□□□□□ -0.38
TCF4-226ENST00000565018 POGZQ7Z3K3 1410 aa12.7□□□□□ -0.38
TCF4-226ENST00000565018 CARD11Q9BXL7 1154 aa12.7□□□□□ -0.38
TCF4-226ENST00000565018 RNF17Q9BXT8 1623 aaKnown RBP12.7□□□□□ -0.38
TCF4-226ENST00000565018 KANK1Q14678 1352 aa12.69□□□□□ -0.38
TCF4-226ENST00000565018 CEP152O94986 1710 aa12.69□□□□□ -0.38
TCF4-226ENST00000565018 PRKRIP1Q9H875 184 aaPredicted RBP12.69□□□□□ -0.38
TCF4-226ENST00000565018 ZNF326Q5BKZ1 582 aaKnown RBP12.67□□□□□ -0.38
TCF4-226ENST00000565018 HECW2Q9P2P5 1572 aa12.66□□□□□ -0.38
TCF4-226ENST00000565018 EFCAB6Q5THR3 1501 aa12.66□□□□□ -0.38
TCF4-226ENST00000565018 GLI2P10070 1586 aa12.65□□□□□ -0.38
TCF4-226ENST00000565018 CLTCL1P53675 1640 aa12.65□□□□□ -0.38
TCF4-226ENST00000565018 PELP1Q8IZL8 1130 aaKnown RBP12.65□□□□□ -0.38
TCF4-226ENST00000565018 MADDQ8WXG6 1647 aa12.64□□□□□ -0.39
TCF4-226ENST00000565018 KDM2AQ9Y2K7 1162 aa12.64□□□□□ -0.39
TCF4-226ENST00000565018 FRMPD1Q5SYB0 1578 aa12.64□□□□□ -0.39
TCF4-226ENST00000565018 MAP3K4Q9Y6R4 1608 aa12.64□□□□□ -0.39
TCF4-226ENST00000565018 ST20-MTHFSA0A0A6YYL1 179 aa12.62□□□□□ -0.39
TCF4-226ENST00000565018 KIF3BO15066 747 aa12.62□□□□□ -0.39
TCF4-226ENST00000565018 KTN1Q86UP2 1357 aaKnown RBP12.62□□□□□ -0.39
TCF4-226ENST00000565018 KIAA1210Q9ULL0 1709 aa12.62□□□□□ -0.39
TCF4-226ENST00000565018 PPRC1Q5VV67 1664 aaKnown RBP12.61□□□□□ -0.39
TCF4-226ENST00000565018 COL17A1Q9UMD9 1497 aaPredicted RBP12.61□□□□□ -0.39
TCF4-226ENST00000565018 RGL3Q3MIN7 710 aa12.61□□□□□ -0.39
TCF4-226ENST00000565018 ABCA6Q8N139 1617 aa12.6□□□□□ -0.39
TCF4-226ENST00000565018 MYOM2P54296 1465 aa12.6□□□□□ -0.39
TCF4-226ENST00000565018 IQGAP1P46940 1657 aa12.59□□□□□ -0.39
TCF4-226ENST00000565018 RICTORQ6R327 1708 aa12.58□□□□□ -0.4
TCF4-226ENST00000565018 NBPF1Q3BBV0 1214 aa12.58□□□□□ -0.4
TCF4-226ENST00000565018 IFT172Q9UG01 1749 aa12.57□□□□□ -0.4
TCF4-226ENST00000565018 DIP2CQ9Y2E4 1556 aa12.57□□□□□ -0.4
TCF4-226ENST00000565018 TESK2Q96S53 571 aa12.57□□□□□ -0.4
TCF4-226ENST00000565018 RIMBP3CA6NJZ7 1639 aa12.56□□□□□ -0.4
TCF4-226ENST00000565018 RIMBP3BA6NNM3 1639 aa12.56□□□□□ -0.4
TCF4-226ENST00000565018 RIMBP3Q9UFD9 1639 aa12.56□□□□□ -0.4
TCF4-226ENST00000565018 KIF1BO60333 1816 aa12.56□□□□□ -0.4
TCF4-226ENST00000565018 NRXN1Q9ULB1 1477 aa12.56□□□□□ -0.4
TCF4-226ENST00000565018 SUPT16HQ9Y5B9 1047 aaKnown RBP12.56□□□□□ -0.4
TCF4-226ENST00000565018 ADGRB3O60242 1522 aa12.55□□□□□ -0.4
TCF4-226ENST00000565018 MYT1LQ9UL68 1186 aa12.55□□□□□ -0.4
TCF4-226ENST00000565018 ABCC3O15438 1527 aa12.55□□□□□ -0.4
TCF4-226ENST00000565018 SCAF11Q99590 1463 aaKnown RBP12.55□□□□□ -0.4
TCF4-226ENST00000565018 ZC3H13Q5T200 1668 aaKnown RBP12.55□□□□□ -0.4
TCF4-226ENST00000565018 ZMYM4Q5VZL5 1548 aa12.54□□□□□ -0.4
TCF4-226ENST00000565018 WASHC2CQ9Y4E1 1318 aa12.54□□□□□ -0.4
TCF4-226ENST00000565018 NPATQ14207 1427 aa12.54□□□□□ -0.4
TCF4-226ENST00000565018 CCDC184Q52MB2 194 aa12.54□□□□□ -0.4
TCF4-226ENST00000565018 MRS2Q9HD23 443 aa12.54□□□□□ -0.4
TCF4-226ENST00000565018 DIP2BQ9P265 1576 aa12.53□□□□□ -0.4
TCF4-226ENST00000565018 ARHGAP31Q2M1Z3 1444 aa12.53□□□□□ -0.4
TCF4-226ENST00000565018 RALBP1Q15311 655 aa12.52□□□□□ -0.4
TCF4-226ENST00000565018 HNRNPUQ00839 825 aaKnown RBP eCLIP12.52□□□□□ -0.41
TCF4-226ENST00000565018 CAMSAP1Q5T5Y3 1602 aa12.52□□□□□ -0.41
TCF4-226ENST00000565018 NOS1P29475 1434 aa12.51□□□□□ -0.41
TCF4-226ENST00000565018 MROH2AA6NES4 1674 aa12.51□□□□□ -0.41
TCF4-226ENST00000565018 UGGT1Q9NYU2 1555 aa12.51□□□□□ -0.41
TCF4-226ENST00000565018 ZBED9Q6R2W3 1325 aa12.51□□□□□ -0.41
TCF4-226ENST00000565018 DISP3Q9P2K9 1392 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms