RNA–Protein interactions for RNA: ENST00000564834.1

LINC01003-201, Transcript of long intergenic non-protein coding RNA 1003, humanhuman

BASIC

Gene LINC01003, Length 1,764 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01003-201ENST00000564834 DIP2BQ9P265 1576 aa35.95■■■■□ 3.35
LINC01003-201ENST00000564834 HECW2Q9P2P5 1572 aa35.93■■■■□ 3.34
LINC01003-201ENST00000564834 DHX29Q7Z478 1369 aaKnown RBP35.93■■■■□ 3.34
LINC01003-201ENST00000564834 MLH3Q9UHC1 1453 aa35.93■■■■□ 3.34
LINC01003-201ENST00000564834 MYT1LQ9UL68 1186 aa35.92■■■■□ 3.34
LINC01003-201ENST00000564834 ATP10AO60312 1499 aa35.85■■■■□ 3.33
LINC01003-201ENST00000564834 VWDEQ8N2E2 1590 aa35.84■■■■□ 3.33
LINC01003-201ENST00000564834 PRDM15P57071 1507 aaPredicted RBP35.84■■■■□ 3.33
LINC01003-201ENST00000564834 RICTORQ6R327 1708 aa35.83■■■■□ 3.33
LINC01003-201ENST00000564834 CCDC144AA2RUR9 1427 aa35.82■■■■□ 3.33
LINC01003-201ENST00000564834 PLA2R1Q13018 1463 aa35.82■■■■□ 3.32
LINC01003-201ENST00000564834 A2MP01023 1474 aa35.81■■■■□ 3.32
LINC01003-201ENST00000564834 TET3O43151 1660 aa35.81■■■■□ 3.32
LINC01003-201ENST00000564834 MROH1Q8NDA8 1641 aa35.8■■■■□ 3.32
LINC01003-201ENST00000564834 E9PCH4 1651 aa35.8■■■■□ 3.32
LINC01003-201ENST00000564834 FAM69CQ0P6D2 419 aa35.79■■■■□ 3.32
LINC01003-201ENST00000564834 KANK1Q14678 1352 aa35.79■■■■□ 3.32
LINC01003-201ENST00000564834 ABCA6Q8N139 1617 aa35.78■■■■□ 3.32
LINC01003-201ENST00000564834 KIF3BO15066 747 aa35.77■■■■□ 3.32
LINC01003-201ENST00000564834 NBPF8Q3BBV2 869 aa35.77■■■■□ 3.32
LINC01003-201ENST00000564834 RNF17Q9BXT8 1623 aaKnown RBP35.76■■■■□ 3.32
LINC01003-201ENST00000564834 BCORL1Q5H9F3 1711 aa35.75■■■■□ 3.31
LINC01003-201ENST00000564834 FRMPD1Q5SYB0 1578 aa35.74■■■■□ 3.31
LINC01003-201ENST00000564834 PPRC1Q5VV67 1664 aaKnown RBP35.74■■■■□ 3.31
LINC01003-201ENST00000564834 UHRF1BP1Q6BDS2 1440 aa35.72■■■■□ 3.31
LINC01003-201ENST00000564834 TSPOAP1O95153 1857 aa35.72■■■■□ 3.31
LINC01003-201ENST00000564834 RAPGEF3O95398 923 aa35.71■■■■□ 3.31
LINC01003-201ENST00000564834 MIER1Q8N108 512 aa35.7■■■■□ 3.31
LINC01003-201ENST00000564834 HIRIP3Q9BW71 556 aaPredicted RBP35.7■■■■□ 3.31
LINC01003-201ENST00000564834 SPHKAPQ2M3C7 1700 aa35.69■■■■□ 3.3
LINC01003-201ENST00000564834 DIP2CQ9Y2E4 1556 aa35.67■■■■□ 3.3
LINC01003-201ENST00000564834 EIF4G2P78344 907 aaKnown RBP eCLIP35.67■■■■□ 3.3
LINC01003-201ENST00000564834 KIF13AQ9H1H9 1805 aa35.67■■■■□ 3.3
LINC01003-201ENST00000564834 TRPM2O94759 1503 aa35.65■■■■□ 3.3
LINC01003-201ENST00000564834 LMTK2Q8IWU2 1503 aa35.64■■■■□ 3.3
LINC01003-201ENST00000564834 HSPA5P11021 654 aaKnown RBP35.64■■■■□ 3.3
LINC01003-201ENST00000564834 PTPRTO14522 1441 aa35.63■■■■□ 3.29
LINC01003-201ENST00000564834 ZMYM4Q5VZL5 1548 aa35.62■■■■□ 3.29
LINC01003-201ENST00000564834 EFCAB6Q5THR3 1501 aa35.6■■■■□ 3.29
LINC01003-201ENST00000564834 RALGAPBQ86X10 1494 aa35.59■■■■□ 3.29
LINC01003-201ENST00000564834 CEP152O94986 1710 aa35.59■■■■□ 3.29
LINC01003-201ENST00000564834 DCAF11Q8TEB1 546 aa35.56■■■■□ 3.28
LINC01003-201ENST00000564834 SPATA31E1Q6ZUB1 1445 aa35.55■■■■□ 3.28
LINC01003-201ENST00000564834 ZNF326Q5BKZ1 582 aaKnown RBP35.54■■■■□ 3.28
LINC01003-201ENST00000564834 DDX10Q13206 875 aaKnown RBP35.53■■■■□ 3.28
LINC01003-201ENST00000564834 CLTCL1P53675 1640 aa35.51■■■■□ 3.28
LINC01003-201ENST00000564834 YEATS2Q9ULM3 1422 aa35.51■■■■□ 3.27
LINC01003-201ENST00000564834 KDM2AQ9Y2K7 1162 aa35.48■■■■□ 3.27
LINC01003-201ENST00000564834 PRAG1Q86YV5 1406 aa35.48■■■■□ 3.27
LINC01003-201ENST00000564834 POLR1AO95602 1720 aaPredicted RBP35.47■■■■□ 3.27
LINC01003-201ENST00000564834 RGL3Q3MIN7 710 aa35.46■■■■□ 3.27
LINC01003-201ENST00000564834 TRPM1Q7Z4N2 1603 aa35.45■■■■□ 3.27
LINC01003-201ENST00000564834 NEURL4Q96JN8 1562 aa35.44■■■■□ 3.26
LINC01003-201ENST00000564834 ABCC3O15438 1527 aa35.44■■■■□ 3.26
LINC01003-201ENST00000564834 GGT6Q6P531 493 aa35.43■■■■□ 3.26
LINC01003-201ENST00000564834 USP47Q96K76 1375 aa35.41■■■■□ 3.26
LINC01003-201ENST00000564834 ZC3H13Q5T200 1668 aaKnown RBP35.4■■■■□ 3.26
LINC01003-201ENST00000564834 WASHC2AQ641Q2 1341 aa35.39■■■■□ 3.26
LINC01003-201ENST00000564834 CAMSAP1Q5T5Y3 1602 aa35.39■■■■□ 3.26
LINC01003-201ENST00000564834 REREQ9P2R6 1566 aa35.38■■■■□ 3.25
LINC01003-201ENST00000564834 KIF1BO60333 1816 aa35.37■■■■□ 3.25
LINC01003-201ENST00000564834 NPATQ14207 1427 aa35.37■■■■□ 3.25
LINC01003-201ENST00000564834 WASHC2CQ9Y4E1 1318 aa35.35■■■■□ 3.25
LINC01003-201ENST00000564834 CARD11Q9BXL7 1154 aa35.34■■■■□ 3.25
LINC01003-201ENST00000564834 ROCK2O75116 1388 aaKnown RBP35.33■■■■□ 3.25
LINC01003-201ENST00000564834 LAMC1P11047 1609 aa35.33■■■■□ 3.25
LINC01003-201ENST00000564834 STAC3Q96MF2 364 aa35.31■■■■□ 3.24
LINC01003-201ENST00000564834 CFAP65Q6ZU64 1925 aaKnown RBP35.31■■■■□ 3.24
LINC01003-201ENST00000564834 CCDC7Q96M83 1385 aa35.31■■■■□ 3.24
LINC01003-201ENST00000564834 UGGT1Q9NYU2 1555 aa35.3■■■■□ 3.24
LINC01003-201ENST00000564834 GPRASP1Q5JY77 1395 aa35.29■■■■□ 3.24
LINC01003-201ENST00000564834 CNTLNQ9NXG0 1405 aa35.28■■■■□ 3.24
LINC01003-201ENST00000564834 MADDQ8WXG6 1647 aa35.28■■■■□ 3.24
LINC01003-201ENST00000564834 AGLP35573 1532 aa35.26■■■■□ 3.24
LINC01003-201ENST00000564834 C11orf95C9JLR9 678 aaPredicted RBP35.26■■■■□ 3.24
LINC01003-201ENST00000564834 COL17A1Q9UMD9 1497 aaPredicted RBP35.26■■■■□ 3.23
LINC01003-201ENST00000564834 ARHGAP31Q2M1Z3 1444 aa35.25■■■■□ 3.23
LINC01003-201ENST00000564834 ARHGEF40Q8TER5 1519 aa35.23■■■■□ 3.23
LINC01003-201ENST00000564834 SIGLEC1Q9BZZ2 1709 aa35.23■■■■□ 3.23
LINC01003-201ENST00000564834 MROH2AA6NES4 1674 aa35.21■■■■□ 3.23
LINC01003-201ENST00000564834 KIF7Q2M1P5 1343 aa35.2■■■■□ 3.23
LINC01003-201ENST00000564834 NOS1P29475 1434 aa35.2■■■■□ 3.23
LINC01003-201ENST00000564834 IFT172Q9UG01 1749 aa35.2■■■■□ 3.23
LINC01003-201ENST00000564834 ADGRB3O60242 1522 aa35.2■■■■□ 3.23
LINC01003-201ENST00000564834 ANP32CO43423 234 aa35.17■■■■□ 3.22
LINC01003-201ENST00000564834 MYOM2P54296 1465 aa35.16■■■■□ 3.22
LINC01003-201ENST00000564834 ARID4BQ4LE39 1312 aaPredicted RBP35.16■■■■□ 3.22
LINC01003-201ENST00000564834 NBPF1Q3BBV0 1214 aa35.15■■■■□ 3.22
LINC01003-201ENST00000564834 PIK3C2BO00750 1634 aa35.15■■■■□ 3.22
LINC01003-201ENST00000564834 KIAA1210Q9ULL0 1709 aa35.14■■■■□ 3.22
LINC01003-201ENST00000564834 SYNMO15061 1565 aa35.13■■■■□ 3.21
LINC01003-201ENST00000564834 CENPBP07199 599 aaPredicted RBP35.12■■■■□ 3.21
LINC01003-201ENST00000564834 ST20-MTHFSA0A0A6YYL1 179 aa35.11■■■■□ 3.21
LINC01003-201ENST00000564834 TRHP20396 242 aaPredicted RBP35.11■■■■□ 3.21
LINC01003-201ENST00000564834 PPP6R1Q9UPN7 881 aa35.1■■■■□ 3.21
LINC01003-201ENST00000564834 YTHDC1Q96MU7 727 aaKnown RBP35.09■■■■□ 3.21
LINC01003-201ENST00000564834 PREX1Q8TCU6 1659 aa35.08■■■■□ 3.21
LINC01003-201ENST00000564834 PPLO60437 1756 aa35.05■■■■□ 3.2
LINC01003-201ENST00000564834 IQGAP1P46940 1657 aa35.04■■■■□ 3.2
LINC01003-201ENST00000564834 CCER2I3L3R5 266 aa35.03■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms