RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 BHMG1C9JSJ3 638 aaPredicted RBP7.28□□□□□ -1.24
SUB1P3-201ENST00000564581 PDIA6Q15084 440 aa7.28□□□□□ -1.24
SUB1P3-201ENST00000564581 C6orf132Q5T0Z8 1188 aa7.28□□□□□ -1.24
SUB1P3-201ENST00000564581 SLC4A5Q9BY07 1137 aa7.28□□□□□ -1.24
SUB1P3-201ENST00000564581 FBXW7Q969H0 707 aa7.27□□□□□ -1.25
SUB1P3-201ENST00000564581 GRXCR2A6NFK2 248 aa7.26□□□□□ -1.25
SUB1P3-201ENST00000564581 PPP1R3GB7ZBB8 358 aa7.26□□□□□ -1.25
SUB1P3-201ENST00000564581 PRIM1P49642 420 aaKnown RBP7.26□□□□□ -1.25
SUB1P3-201ENST00000564581 NBR1Q14596 966 aa7.26□□□□□ -1.25
SUB1P3-201ENST00000564581 TSR1Q2NL82 804 aaKnown RBP7.26□□□□□ -1.25
SUB1P3-201ENST00000564581 EPAS1Q99814 870 aa7.26□□□□□ -1.25
SUB1P3-201ENST00000564581 PTPN5P54829 565 aa7.25□□□□□ -1.25
SUB1P3-201ENST00000564581 HCSTQ9UBK5 93 aa7.25□□□□□ -1.25
SUB1P3-201ENST00000564581 MRPL50Q8N5N7 158 aaKnown RBP7.24□□□□□ -1.25
SUB1P3-201ENST00000564581 SPDYE16A6NNV3 312 aaPredicted RBP7.23□□□□□ -1.25
SUB1P3-201ENST00000564581 KIAA1468Q9P260 1216 aa7.23□□□□□ -1.25
SUB1P3-201ENST00000564581 GOLGA8CPA6NN73 597 aa7.22□□□□□ -1.25
SUB1P3-201ENST00000564581 MAP3K7O43318 606 aa7.22□□□□□ -1.25
SUB1P3-201ENST00000564581 EN1Q05925 392 aaPredicted RBP7.22□□□□□ -1.25
SUB1P3-201ENST00000564581 RABGEF1Q9UJ41 708 aa7.22□□□□□ -1.25
SUB1P3-201ENST00000564581 ARIH1Q9Y4X5 557 aaPredicted RBP7.22□□□□□ -1.25
SUB1P3-201ENST00000564581 WNT2BQ93097 391 aa7.21□□□□□ -1.26
SUB1P3-201ENST00000564581 THSD4Q6ZMP0 1018 aa7.2□□□□□ -1.26
SUB1P3-201ENST00000564581 KCNV2Q8TDN2 545 aa7.2□□□□□ -1.26
SUB1P3-201ENST00000564581 NBPF3Q9H094 633 aa7.2□□□□□ -1.26
SUB1P3-201ENST00000564581 PLA2G2EQ9NZK7 142 aa7.2□□□□□ -1.26
SUB1P3-201ENST00000564581 SEPT9Q9UHD8 586 aaPredicted RBP7.2□□□□□ -1.26
SUB1P3-201ENST00000564581 OSBPP22059 807 aa7.19□□□□□ -1.26
SUB1P3-201ENST00000564581 CDHR5Q9HBB8 845 aa7.19□□□□□ -1.26
SUB1P3-201ENST00000564581 TRIM6-TRIM34B2RNG4 842 aa7.18□□□□□ -1.26
SUB1P3-201ENST00000564581 TSKSQ9UJT2 592 aa7.18□□□□□ -1.26
SUB1P3-201ENST00000564581 MLLT3P42568 568 aaPredicted RBP7.17□□□□□ -1.26
SUB1P3-201ENST00000564581 BCAMP50895 628 aa7.17□□□□□ -1.26
SUB1P3-201ENST00000564581 PLCB2Q00722 1185 aa7.17□□□□□ -1.26
SUB1P3-201ENST00000564581 FAM198AQ9UFP1 575 aa7.17□□□□□ -1.26
SUB1P3-201ENST00000564581 C3orf80F5H4A9 247 aa7.16□□□□□ -1.26
SUB1P3-201ENST00000564581 SMAPO00193 183 aa7.16□□□□□ -1.26
SUB1P3-201ENST00000564581 CDCA7LQ96GN5 454 aa7.15□□□□□ -1.26
SUB1P3-201ENST00000564581 ZFRQ96KR1 1074 aaKnown RBP7.15□□□□□ -1.26
SUB1P3-201ENST00000564581 ONECUT3O60422 494 aaPredicted RBP7.14□□□□□ -1.27
SUB1P3-201ENST00000564581 ARHGEF1Q92888 912 aaKnown RBP7.14□□□□□ -1.27
SUB1P3-201ENST00000564581 PRSS12P56730 875 aa7.13□□□□□ -1.27
SUB1P3-201ENST00000564581 ANKK1Q8NFD2 765 aa7.13□□□□□ -1.27
SUB1P3-201ENST00000564581 LAPTM4BQ86VI4 370 aa7.12□□□□□ -1.27
SUB1P3-201ENST00000564581 PACS2Q86VP3 889 aa7.12□□□□□ -1.27
SUB1P3-201ENST00000564581 NPDC1Q9NQX5 325 aaPredicted RBP7.12□□□□□ -1.27
SUB1P3-201ENST00000564581 SOWAHBA6NEL2 793 aa7.11□□□□□ -1.27
SUB1P3-201ENST00000564581 HAP1P54257 671 aaPredicted RBP7.11□□□□□ -1.27
SUB1P3-201ENST00000564581 FAM98CQ17RN3 349 aaKnown RBP7.11□□□□□ -1.27
SUB1P3-201ENST00000564581 WBP1LQ9NX94 342 aa7.11□□□□□ -1.27
SUB1P3-201ENST00000564581 PNMA3Q9UL41 463 aa7.1□□□□□ -1.27
SUB1P3-201ENST00000564581 SEMA3EO15041 775 aa7.09□□□□□ -1.27
SUB1P3-201ENST00000564581 TATDN2Q93075 761 aa7.09□□□□□ -1.27
SUB1P3-201ENST00000564581 PADI6Q6TGC4 694 aa7.08□□□□□ -1.28
SUB1P3-201ENST00000564581 NUDT18Q6ZVK8 323 aa7.08□□□□□ -1.28
SUB1P3-201ENST00000564581 CERKQ8TCT0 537 aa7.08□□□□□ -1.28
SUB1P3-201ENST00000564581 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.08□□□□□ -1.28
SUB1P3-201ENST00000564581 HPS5Q9UPZ3 1129 aa7.08□□□□□ -1.28
SUB1P3-201ENST00000564581 SAMD7Q7Z3H4 446 aa7.07□□□□□ -1.28
SUB1P3-201ENST00000564581 LRCH3Q96II8 777 aa7.07□□□□□ -1.28
SUB1P3-201ENST00000564581 KDM2AQ9Y2K7 1162 aa7.07□□□□□ -1.28
SUB1P3-201ENST00000564581 P3H3Q8IVL6 736 aa7.05□□□□□ -1.28
SUB1P3-201ENST00000564581 TTC13Q8NBP0 860 aa7.05□□□□□ -1.28
SUB1P3-201ENST00000564581 TSR3Q9UJK0 312 aaKnown RBP7.05□□□□□ -1.28
SUB1P3-201ENST00000564581 NBPF26B4DH59 902 aa7.04□□□□□ -1.28
SUB1P3-201ENST00000564581 NUTM2FA1L443 756 aa7.03□□□□□ -1.28
SUB1P3-201ENST00000564581 PTGDRQ13258 359 aa7.03□□□□□ -1.28
SUB1P3-201ENST00000564581 FAM161AQ3B820 660 aa7.03□□□□□ -1.28
SUB1P3-201ENST00000564581 RNF40O75150 1001 aa7.02□□□□□ -1.29
SUB1P3-201ENST00000564581 PPP4CP60510 307 aa7.02□□□□□ -1.29
SUB1P3-201ENST00000564581 RBM26Q5T8P6 1007 aaKnown RBP7.01□□□□□ -1.29
SUB1P3-201ENST00000564581 RBM27Q9P2N5 1060 aaKnown RBP7.01□□□□□ -1.29
SUB1P3-201ENST00000564581 ITGBL1O95965 494 aaPredicted RBP7□□□□□ -1.29
SUB1P3-201ENST00000564581 SWT1Q5T5J6 900 aaKnown RBP7□□□□□ -1.29
SUB1P3-201ENST00000564581 EYA1Q99502 592 aa7□□□□□ -1.29
SUB1P3-201ENST00000564581 A0A0G2JS52 829 aa6.99□□□□□ -1.29
SUB1P3-201ENST00000564581 IFFO2Q5TF58 517 aa6.99□□□□□ -1.29
SUB1P3-201ENST00000564581 TESPA1A2RU30 521 aaPredicted RBP6.98□□□□□ -1.29
SUB1P3-201ENST00000564581 NYAP1Q6ZVC0 841 aa6.98□□□□□ -1.29
SUB1P3-201ENST00000564581 APLP1P51693 650 aa6.97□□□□□ -1.29
SUB1P3-201ENST00000564581 HDGFP51858 240 aaKnown RBP6.97□□□□□ -1.29
SUB1P3-201ENST00000564581 KCNC4Q03721 635 aa6.97□□□□□ -1.29
SUB1P3-201ENST00000564581 ADGRG1Q9Y653 693 aa6.96□□□□□ -1.3
SUB1P3-201ENST00000564581 FCHSD2O94868 740 aa6.95□□□□□ -1.3
SUB1P3-201ENST00000564581 FECHP22830 423 aa6.95□□□□□ -1.3
SUB1P3-201ENST00000564581 TJAP1Q5JTD0 557 aa6.95□□□□□ -1.3
SUB1P3-201ENST00000564581 ZNF516Q92618 1163 aa6.94□□□□□ -1.3
SUB1P3-201ENST00000564581 MTRQ99707 1265 aa6.94□□□□□ -1.3
SUB1P3-201ENST00000564581 RCCD1A6NED2 376 aa6.93□□□□□ -1.3
SUB1P3-201ENST00000564581 SLF2Q8IX21 1173 aa6.92□□□□□ -1.3
SUB1P3-201ENST00000564581 RBM46Q8TBY0 533 aaKnown RBP6.92□□□□□ -1.3
SUB1P3-201ENST00000564581 GPR37O15354 613 aa6.91□□□□□ -1.3
SUB1P3-201ENST00000564581 DNAJB2P25686 324 aa6.91□□□□□ -1.3
SUB1P3-201ENST00000564581 COPS2P61201 443 aa6.91□□□□□ -1.3
SUB1P3-201ENST00000564581 SMYD5Q6GMV2 418 aa6.91□□□□□ -1.3
SUB1P3-201ENST00000564581 HIC1Q14526 733 aa6.9□□□□□ -1.3
SUB1P3-201ENST00000564581 VSIG10Q8N0Z9 540 aa6.9□□□□□ -1.3
SUB1P3-201ENST00000564581 NKX2-3Q8TAU0 364 aa6.9□□□□□ -1.3
SUB1P3-201ENST00000564581 TMEM134Q9H6X4 195 aa6.9□□□□□ -1.3
SUB1P3-201ENST00000564581 PXYLP1Q8TE99 480 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms