RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 PHF14O94880 888 aa12.59□□□□□ -0.39
UBR1-205ENST00000564540 ZDHHC16Q969W1 377 aa12.59□□□□□ -0.39
UBR1-205ENST00000564540 ADAM33Q9BZ11 813 aa12.58□□□□□ -0.4
UBR1-205ENST00000564540 GRXCR2A6NFK2 248 aa12.57□□□□□ -0.4
UBR1-205ENST00000564540 TYW1BQ6NUM6 668 aa12.56□□□□□ -0.4
UBR1-205ENST00000564540 KCNK17Q96T54 332 aa12.56□□□□□ -0.4
UBR1-205ENST00000564540 BCL2L12Q9HB09 334 aa12.56□□□□□ -0.4
UBR1-205ENST00000564540 NBR1Q14596 966 aa12.55□□□□□ -0.4
UBR1-205ENST00000564540 STAC3Q96MF2 364 aa12.55□□□□□ -0.4
UBR1-205ENST00000564540 MLLT3P42568 568 aaPredicted RBP12.54□□□□□ -0.4
UBR1-205ENST00000564540 SEMA3EO15041 775 aa12.53□□□□□ -0.4
UBR1-205ENST00000564540 FBXW7Q969H0 707 aa12.53□□□□□ -0.4
UBR1-205ENST00000564540 RBM33Q96EV2 1170 aaKnown RBP12.53□□□□□ -0.4
UBR1-205ENST00000564540 EPAS1Q99814 870 aa12.53□□□□□ -0.4
UBR1-205ENST00000564540 VPS9D1Q9Y2B5 631 aa12.53□□□□□ -0.4
UBR1-205ENST00000564540 PRIM1P49642 420 aaKnown RBP12.52□□□□□ -0.41
UBR1-205ENST00000564540 KCNH8Q96L42 1107 aa12.51□□□□□ -0.41
UBR1-205ENST00000564540 PTPREP23469 700 aa12.5□□□□□ -0.41
UBR1-205ENST00000564540 SLC4A5Q9BY07 1137 aa12.5□□□□□ -0.41
UBR1-205ENST00000564540 OSBPP22059 807 aa12.48□□□□□ -0.41
UBR1-205ENST00000564540 EN1Q05925 392 aaPredicted RBP12.48□□□□□ -0.41
UBR1-205ENST00000564540 MAP3K7O43318 606 aa12.47□□□□□ -0.41
UBR1-205ENST00000564540 SLC24A1O60721 1099 aa12.46□□□□□ -0.41
UBR1-205ENST00000564540 PTPN5P54829 565 aa12.46□□□□□ -0.41
UBR1-205ENST00000564540 TSR1Q2NL82 804 aaKnown RBP12.46□□□□□ -0.41
UBR1-205ENST00000564540 C6orf132Q5T0Z8 1188 aa12.46□□□□□ -0.41
UBR1-205ENST00000564540 IRX2Q9BZI1 471 aaPredicted RBP12.46□□□□□ -0.41
UBR1-205ENST00000564540 A0A0G2JS52 829 aa12.45□□□□□ -0.42
UBR1-205ENST00000564540 COL9A1P20849 921 aa12.45□□□□□ -0.42
UBR1-205ENST00000564540 BHMG1C9JSJ3 638 aaPredicted RBP12.44□□□□□ -0.42
UBR1-205ENST00000564540 THSD4Q6ZMP0 1018 aa12.43□□□□□ -0.42
UBR1-205ENST00000564540 TESPA1A2RU30 521 aaPredicted RBP12.42□□□□□ -0.42
UBR1-205ENST00000564540 PPP1R3GB7ZBB8 358 aa12.41□□□□□ -0.42
UBR1-205ENST00000564540 ZBED2Q9BTP6 218 aa12.41□□□□□ -0.42
UBR1-205ENST00000564540 CDHR5Q9HBB8 845 aa12.4□□□□□ -0.42
UBR1-205ENST00000564540 PROX2Q3B8N5 592 aa12.37□□□□□ -0.43
UBR1-205ENST00000564540 RBM26Q5T8P6 1007 aaKnown RBP12.33□□□□□ -0.44
UBR1-205ENST00000564540 WNT2BQ93097 391 aa12.33□□□□□ -0.44
UBR1-205ENST00000564540 MRPL50Q8N5N7 158 aaKnown RBP12.31□□□□□ -0.44
UBR1-205ENST00000564540 NPDC1Q9NQX5 325 aaPredicted RBP12.31□□□□□ -0.44
UBR1-205ENST00000564540 NUTM2FA1L443 756 aa12.3□□□□□ -0.44
UBR1-205ENST00000564540 GOLGA8CPA6NN73 597 aa12.3□□□□□ -0.44
UBR1-205ENST00000564540 SMYD5Q6GMV2 418 aa12.3□□□□□ -0.44
UBR1-205ENST00000564540 TRIM6-TRIM34B2RNG4 842 aa12.28□□□□□ -0.44
UBR1-205ENST00000564540 CDCA7LQ96GN5 454 aa12.28□□□□□ -0.44
UBR1-205ENST00000564540 CERKQ8TCT0 537 aa12.27□□□□□ -0.45
UBR1-205ENST00000564540 NBPF3Q9H094 633 aa12.27□□□□□ -0.45
UBR1-205ENST00000564540 KIAA1468Q9P260 1216 aa12.27□□□□□ -0.45
UBR1-205ENST00000564540 TSKSQ9UJT2 592 aa12.27□□□□□ -0.45
UBR1-205ENST00000564540 PRSS12P56730 875 aa12.26□□□□□ -0.45
UBR1-205ENST00000564540 RABGEF1Q9UJ41 708 aa12.26□□□□□ -0.45
UBR1-205ENST00000564540 ITGBL1O95965 494 aaPredicted RBP12.25□□□□□ -0.45
UBR1-205ENST00000564540 PTGDRQ13258 359 aa12.25□□□□□ -0.45
UBR1-205ENST00000564540 FAM198AQ9UFP1 575 aa12.25□□□□□ -0.45
UBR1-205ENST00000564540 ONECUT3O60422 494 aaPredicted RBP12.22□□□□□ -0.45
UBR1-205ENST00000564540 PADI6Q6TGC4 694 aa12.22□□□□□ -0.45
UBR1-205ENST00000564540 C3orf80F5H4A9 247 aa12.21□□□□□ -0.45
UBR1-205ENST00000564540 SEPT9Q9UHD8 586 aaPredicted RBP12.21□□□□□ -0.45
UBR1-205ENST00000564540 PACS2Q86VP3 889 aa12.2□□□□□ -0.46
UBR1-205ENST00000564540 RBM27Q9P2N5 1060 aaKnown RBP12.19□□□□□ -0.46
UBR1-205ENST00000564540 SMAPO00193 183 aa12.18□□□□□ -0.46
UBR1-205ENST00000564540 TULP1O00294 542 aaPredicted RBP12.18□□□□□ -0.46
UBR1-205ENST00000564540 GPR37O15354 613 aa12.18□□□□□ -0.46
UBR1-205ENST00000564540 FCHSD2O94868 740 aa12.18□□□□□ -0.46
UBR1-205ENST00000564540 TTC13Q8NBP0 860 aa12.18□□□□□ -0.46
UBR1-205ENST00000564540 GPIHBP1Q8IV16 184 aa12.17□□□□□ -0.46
UBR1-205ENST00000564540 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.16□□□□□ -0.46
UBR1-205ENST00000564540 ANKK1Q8NFD2 765 aa12.15□□□□□ -0.46
UBR1-205ENST00000564540 TATDN2Q93075 761 aa12.15□□□□□ -0.46
UBR1-205ENST00000564540 Q6ZNB5 142 aa12.14□□□□□ -0.47
UBR1-205ENST00000564540 NUDT18Q6ZVK8 323 aa12.14□□□□□ -0.47
UBR1-205ENST00000564540 PNMA3Q9UL41 463 aa12.14□□□□□ -0.47
UBR1-205ENST00000564540 NBPF26B4DH59 902 aa12.13□□□□□ -0.47
UBR1-205ENST00000564540 FECHP22830 423 aa12.13□□□□□ -0.47
UBR1-205ENST00000564540 HIC1Q14526 733 aa12.13□□□□□ -0.47
UBR1-205ENST00000564540 NYAP1Q6ZVC0 841 aa12.13□□□□□ -0.47
UBR1-205ENST00000564540 LAPTM4BQ86VI4 370 aa12.13□□□□□ -0.47
UBR1-205ENST00000564540 FAM98CQ17RN3 349 aaKnown RBP12.12□□□□□ -0.47
UBR1-205ENST00000564540 FAM161AQ3B820 660 aa12.12□□□□□ -0.47
UBR1-205ENST00000564540 LMOD2Q6P5Q4 547 aa12.12□□□□□ -0.47
UBR1-205ENST00000564540 ZFRQ96KR1 1074 aaKnown RBP12.12□□□□□ -0.47
UBR1-205ENST00000564540 GNPATO15228 680 aa12.1□□□□□ -0.47
UBR1-205ENST00000564540 SOWAHBA6NEL2 793 aa12.09□□□□□ -0.47
UBR1-205ENST00000564540 ADGRG1Q9Y653 693 aa12.08□□□□□ -0.48
UBR1-205ENST00000564540 LAPTM4AQ15012 233 aa12.07□□□□□ -0.48
UBR1-205ENST00000564540 EYA1Q99502 592 aa12.07□□□□□ -0.48
UBR1-205ENST00000564540 BCAMP50895 628 aa12.06□□□□□ -0.48
UBR1-205ENST00000564540 BCANQ96GW7 911 aa12.05□□□□□ -0.48
UBR1-205ENST00000564540 KCNC4Q03721 635 aa12.04□□□□□ -0.48
UBR1-205ENST00000564540 SAMD7Q7Z3H4 446 aa12.03□□□□□ -0.48
UBR1-205ENST00000564540 RBM46Q8TBY0 533 aaKnown RBP12.02□□□□□ -0.49
UBR1-205ENST00000564540 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.01□□□□□ -0.49
UBR1-205ENST00000564540 LCE2BO14633 110 aa12□□□□□ -0.49
UBR1-205ENST00000564540 LRCH3Q96II8 777 aa12□□□□□ -0.49
UBR1-205ENST00000564540 WBP1LQ9NX94 342 aa12□□□□□ -0.49
UBR1-205ENST00000564540 METTL3Q86U44 580 aaKnown RBP11.98□□□□□ -0.49
UBR1-205ENST00000564540 PXYLP1Q8TE99 480 aa11.98□□□□□ -0.49
UBR1-205ENST00000564540 ZC3H15Q8WU90 426 aaKnown RBP11.98□□□□□ -0.49
UBR1-205ENST00000564540 RCCD1A6NED2 376 aa11.97□□□□□ -0.49
UBR1-205ENST00000564540 OATP04181 439 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms