RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 CLASP1Q7Z460 1538 aa27.39■■□□□ 1.98
MSLN-205ENST00000563941 PLEKHH2Q8IVE3 1493 aa27.38■■□□□ 1.97
MSLN-205ENST00000563941 MYT1Q01538 1121 aa27.35■■□□□ 1.97
MSLN-205ENST00000563941 CCDC144AA2RUR9 1427 aa27.35■■□□□ 1.97
MSLN-205ENST00000563941 IRX6P78412 446 aaPredicted RBP27.35■■□□□ 1.97
MSLN-205ENST00000563941 IQGAP3Q86VI3 1631 aa27.33■■□□□ 1.97
MSLN-205ENST00000563941 ST20-MTHFSA0A0A6YYL1 179 aa27.32■■□□□ 1.96
MSLN-205ENST00000563941 TRPM1Q7Z4N2 1603 aa27.32■■□□□ 1.96
MSLN-205ENST00000563941 ZCCHC11Q5TAX3 1644 aaKnown RBP27.31■■□□□ 1.96
MSLN-205ENST00000563941 CNGB1Q14028 1251 aaPredicted RBP27.31■■□□□ 1.96
MSLN-205ENST00000563941 PLA2R1Q13018 1463 aa27.3■■□□□ 1.96
MSLN-205ENST00000563941 DUOX2Q9NRD8 1548 aa27.29■■□□□ 1.96
MSLN-205ENST00000563941 PRAG1Q86YV5 1406 aa27.29■■□□□ 1.96
MSLN-205ENST00000563941 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.28■■□□□ 1.96
MSLN-205ENST00000563941 ERICH6BQ5W0A0 696 aa27.28■■□□□ 1.96
MSLN-205ENST00000563941 PLCH2O75038 1416 aa27.27■■□□□ 1.96
MSLN-205ENST00000563941 E9PCH4 1651 aa27.27■■□□□ 1.96
MSLN-205ENST00000563941 UHRF1BP1LA0JNW5 1464 aa27.25■■□□□ 1.95
MSLN-205ENST00000563941 MAGI2Q86UL8 1455 aa27.24■■□□□ 1.95
MSLN-205ENST00000563941 ERBINQ96RT1 1412 aa27.24■■□□□ 1.95
MSLN-205ENST00000563941 A2MP01023 1474 aa27.23■■□□□ 1.95
MSLN-205ENST00000563941 ABCC1P33527 1531 aa27.21■■□□□ 1.95
MSLN-205ENST00000563941 RGL3Q3MIN7 710 aa27.21■■□□□ 1.95
MSLN-205ENST00000563941 EFCAB2Q5VUJ9 269 aa27.19■■□□□ 1.94
MSLN-205ENST00000563941 RBM19Q9Y4C8 960 aaKnown RBP27.19■■□□□ 1.94
MSLN-205ENST00000563941 LAMC1P11047 1609 aa27.18■■□□□ 1.94
MSLN-205ENST00000563941 GPRASP1Q5JY77 1395 aa27.18■■□□□ 1.94
MSLN-205ENST00000563941 ATP10AO60312 1499 aa27.18■■□□□ 1.94
MSLN-205ENST00000563941 PPP4R2Q9NY27 417 aa27.17■■□□□ 1.94
MSLN-205ENST00000563941 SMG6Q86US8 1419 aaKnown RBP27.16■■□□□ 1.94
MSLN-205ENST00000563941 KTN1Q86UP2 1357 aaKnown RBP27.16■■□□□ 1.94
MSLN-205ENST00000563941 PNISRQ8TF01 805 aaKnown RBP27.16■■□□□ 1.94
MSLN-205ENST00000563941 TMC1Q8TDI8 760 aa27.15■■□□□ 1.94
MSLN-205ENST00000563941 EIF2AK4Q9P2K8 1649 aaKnown RBP27.15■■□□□ 1.94
MSLN-205ENST00000563941 NBPF1Q3BBV0 1214 aa27.14■■□□□ 1.94
MSLN-205ENST00000563941 TRAPPC8Q9Y2L5 1435 aa27.14■■□□□ 1.94
MSLN-205ENST00000563941 PRDM15P57071 1507 aaPredicted RBP27.14■■□□□ 1.94
MSLN-205ENST00000563941 MYBBP1AQ9BQG0 1328 aaKnown RBP27.12■■□□□ 1.93
MSLN-205ENST00000563941 RALBP1Q15311 655 aa27.11■■□□□ 1.93
MSLN-205ENST00000563941 BRD4O60885 1362 aaPredicted RBP27.1■■□□□ 1.93
MSLN-205ENST00000563941 ARAP3Q8WWN8 1544 aa27.08■■□□□ 1.93
MSLN-205ENST00000563941 COL17A1Q9UMD9 1497 aaPredicted RBP27.08■■□□□ 1.93
MSLN-205ENST00000563941 NUDCQ9Y266 331 aa27.08■■□□□ 1.93
MSLN-205ENST00000563941 LRPPRCP42704 1394 aaKnown RBP27.07■■□□□ 1.92
MSLN-205ENST00000563941 ZFYVE16Q7Z3T8 1539 aa27.04■■□□□ 1.92
MSLN-205ENST00000563941 SPAG9O60271 1321 aaKnown RBP27.04■■□□□ 1.92
MSLN-205ENST00000563941 RTEL1-TNFRSF6BF6WH68 1400 aa27.04■■□□□ 1.92
MSLN-205ENST00000563941 RNF17Q9BXT8 1623 aaKnown RBP27.03■■□□□ 1.92
MSLN-205ENST00000563941 TESK2Q96S53 571 aa27.02■■□□□ 1.92
MSLN-205ENST00000563941 PARD3Q8TEW0 1356 aa27.02■■□□□ 1.92
MSLN-205ENST00000563941 DISP3Q9P2K9 1392 aa27.01■■□□□ 1.91
MSLN-205ENST00000563941 AFAP1Q8N556 730 aa26.99■■□□□ 1.91
MSLN-205ENST00000563941 B4GALNT3Q6L9W6 998 aa26.98■■□□□ 1.91
MSLN-205ENST00000563941 DEPDC5O75140 1603 aa26.98■■□□□ 1.91
MSLN-205ENST00000563941 RNF123Q5XPI4 1314 aa26.97■■□□□ 1.91
MSLN-205ENST00000563941 SENP3-EIF4A1A0A087X0R7 540 aa26.97■■□□□ 1.91
MSLN-205ENST00000563941 PER1O15534 1290 aaPredicted RBP26.97■■□□□ 1.91
MSLN-205ENST00000563941 WDR7Q9Y4E6 1490 aa26.97■■□□□ 1.91
MSLN-205ENST00000563941 TRPM2O94759 1503 aa26.97■■□□□ 1.91
MSLN-205ENST00000563941 NLRP13Q86W25 1043 aa26.96■■□□□ 1.91
MSLN-205ENST00000563941 ANP32EQ9BTT0 268 aa26.96■■□□□ 1.91
MSLN-205ENST00000563941 MADDQ8WXG6 1647 aa26.96■■□□□ 1.91
MSLN-205ENST00000563941 SPHKAPQ2M3C7 1700 aa26.95■■□□□ 1.91
MSLN-205ENST00000563941 ABCA9Q8IUA7 1624 aa26.95■■□□□ 1.91
MSLN-205ENST00000563941 CEP152O94986 1710 aa26.95■■□□□ 1.9
MSLN-205ENST00000563941 OSCARQ8IYS5 282 aa26.93■■□□□ 1.9
MSLN-205ENST00000563941 INO80Q9ULG1 1556 aaPredicted RBP26.93■■□□□ 1.9
MSLN-205ENST00000563941 TMF1P82094 1093 aa26.92■■□□□ 1.9
MSLN-205ENST00000563941 ATP7AQ04656 1500 aa26.92■■□□□ 1.9
MSLN-205ENST00000563941 TET3O43151 1660 aa26.91■■□□□ 1.9
MSLN-205ENST00000563941 FANCAO15360 1455 aa26.91■■□□□ 1.9
MSLN-205ENST00000563941 WASHC2CQ9Y4E1 1318 aa26.91■■□□□ 1.9
MSLN-205ENST00000563941 PTPRTO14522 1441 aa26.91■■□□□ 1.9
MSLN-205ENST00000563941 CLTCL1P53675 1640 aa26.9■■□□□ 1.9
MSLN-205ENST00000563941 IQGAP1P46940 1657 aa26.9■■□□□ 1.9
MSLN-205ENST00000563941 PANK3Q9H999 370 aa26.87■■□□□ 1.89
MSLN-205ENST00000563941 VWDEQ8N2E2 1590 aa26.86■■□□□ 1.89
MSLN-205ENST00000563941 CC2D1BQ5T0F9 858 aaKnown RBP26.85■■□□□ 1.89
MSLN-205ENST00000563941 KANK1Q14678 1352 aa26.84■■□□□ 1.89
MSLN-205ENST00000563941 ADGRL1O94910 1474 aa26.83■■□□□ 1.89
MSLN-205ENST00000563941 FANCIQ9NVI1 1328 aa26.82■■□□□ 1.88
MSLN-205ENST00000563941 STAC3Q96MF2 364 aa26.81■■□□□ 1.88
MSLN-205ENST00000563941 SCAPERQ9BY12 1400 aa26.8■■□□□ 1.88
MSLN-205ENST00000563941 SCAF11Q99590 1463 aaKnown RBP26.78■■□□□ 1.88
MSLN-205ENST00000563941 KIF3BO15066 747 aa26.78■■□□□ 1.88
MSLN-205ENST00000563941 MROH1Q8NDA8 1641 aa26.78■■□□□ 1.88
MSLN-205ENST00000563941 MYT1LQ9UL68 1186 aa26.77■■□□□ 1.88
MSLN-205ENST00000563941 ZMYM4Q5VZL5 1548 aa26.77■■□□□ 1.88
MSLN-205ENST00000563941 ASXL2Q76L83 1435 aa26.77■■□□□ 1.88
MSLN-205ENST00000563941 INSRP06213 1382 aa26.76■■□□□ 1.87
MSLN-205ENST00000563941 NEURL4Q96JN8 1562 aa26.75■■□□□ 1.87
MSLN-205ENST00000563941 BLMP54132 1417 aaPredicted RBP26.75■■□□□ 1.87
MSLN-205ENST00000563941 PDE3BQ13370 1112 aa26.74■■□□□ 1.87
MSLN-205ENST00000563941 CCDC136Q96JN2 1154 aa26.74■■□□□ 1.87
MSLN-205ENST00000563941 SALL2Q9Y467 1007 aaPredicted RBP26.74■■□□□ 1.87
MSLN-205ENST00000563941 KIAA1210Q9ULL0 1709 aa26.74■■□□□ 1.87
MSLN-205ENST00000563941 MSH5O43196 834 aa26.73■■□□□ 1.87
MSLN-205ENST00000563941 SYNMO15061 1565 aa26.72■■□□□ 1.87
MSLN-205ENST00000563941 KIDINS220Q9ULH0 1771 aa26.7■■□□□ 1.87
MSLN-205ENST00000563941 RRP1P56182 461 aaKnown RBP26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms