RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 CC2D1BQ5T0F9 858 aaKnown RBP16.73■□□□□ 0.27
CCDC187-201ENST00000563590 MIA2Q96PC5 1412 aa16.73■□□□□ 0.27
CCDC187-201ENST00000563590 UBE2Q2Q8WVN8 375 aa16.72■□□□□ 0.27
CCDC187-201ENST00000563590 PBRM1Q86U86 1689 aa16.72■□□□□ 0.27
CCDC187-201ENST00000563590 NAP1L5Q96NT1 182 aaPredicted RBP16.7■□□□□ 0.26
CCDC187-201ENST00000563590 DAPK1P53355 1430 aa16.7■□□□□ 0.26
CCDC187-201ENST00000563590 EPRSP07814 1512 aaKnown RBP16.7■□□□□ 0.26
CCDC187-201ENST00000563590 BCORL1Q5H9F3 1711 aa16.69■□□□□ 0.26
CCDC187-201ENST00000563590 BACH2Q9BYV9 841 aa16.69■□□□□ 0.26
CCDC187-201ENST00000563590 POLR1AO95602 1720 aaPredicted RBP16.69■□□□□ 0.26
CCDC187-201ENST00000563590 ABCC5O15440 1437 aa16.67■□□□□ 0.26
CCDC187-201ENST00000563590 FRAT2O75474 233 aaPredicted RBP16.67■□□□□ 0.26
CCDC187-201ENST00000563590 CYB5RLQ6IPT4 315 aa16.67■□□□□ 0.26
CCDC187-201ENST00000563590 ROCK1Q13464 1354 aa16.66■□□□□ 0.26
CCDC187-201ENST00000563590 GLIPR1L2Q4G1C9 344 aa16.66■□□□□ 0.26
CCDC187-201ENST00000563590 SLKQ9H2G2 1235 aaPredicted RBP16.65■□□□□ 0.26
CCDC187-201ENST00000563590 VSIG10Q8N0Z9 540 aa16.64■□□□□ 0.25
CCDC187-201ENST00000563590 LRPPRCP42704 1394 aaKnown RBP16.63■□□□□ 0.25
CCDC187-201ENST00000563590 KIF15Q9NS87 1388 aa16.63■□□□□ 0.25
CCDC187-201ENST00000563590 TNNT2P45379 298 aaPredicted RBP16.62■□□□□ 0.25
CCDC187-201ENST00000563590 SPRYD3Q8NCJ5 442 aa16.62■□□□□ 0.25
CCDC187-201ENST00000563590 CDCA7LQ96GN5 454 aa16.62■□□□□ 0.25
CCDC187-201ENST00000563590 MYBBP1AQ9BQG0 1328 aaKnown RBP16.62■□□□□ 0.25
CCDC187-201ENST00000563590 PZPP20742 1482 aa16.62■□□□□ 0.25
CCDC187-201ENST00000563590 CRBNQ96SW2 442 aa16.62■□□□□ 0.25
CCDC187-201ENST00000563590 MS4A1P11836 297 aa16.61■□□□□ 0.25
CCDC187-201ENST00000563590 MBD5Q9P267 1494 aa16.61■□□□□ 0.25
CCDC187-201ENST00000563590 GZF1Q9H116 711 aaPredicted RBP16.61■□□□□ 0.25
CCDC187-201ENST00000563590 ST20-MTHFSA0A0A6YYL1 179 aa16.6■□□□□ 0.25
CCDC187-201ENST00000563590 BRD4O60885 1362 aaPredicted RBP16.6■□□□□ 0.25
CCDC187-201ENST00000563590 ROCK2O75116 1388 aaKnown RBP16.6■□□□□ 0.25
CCDC187-201ENST00000563590 DISP1Q96F81 1524 aa16.6■□□□□ 0.25
CCDC187-201ENST00000563590 WASHC2CQ9Y4E1 1318 aa16.59■□□□□ 0.25
CCDC187-201ENST00000563590 PKNOX2Q96KN3 472 aa16.59■□□□□ 0.25
CCDC187-201ENST00000563590 RALBP1Q15311 655 aa16.58■□□□□ 0.24
CCDC187-201ENST00000563590 NEUROD2Q15784 382 aa16.58■□□□□ 0.24
CCDC187-201ENST00000563590 CEP170Q5SW79 1584 aa16.58■□□□□ 0.24
CCDC187-201ENST00000563590 RSPH6AQ9H0K4 717 aa16.57■□□□□ 0.24
CCDC187-201ENST00000563590 KIAA1107Q9UPP5 1409 aa16.57■□□□□ 0.24
CCDC187-201ENST00000563590 KDM5CP41229 1560 aa16.57■□□□□ 0.24
CCDC187-201ENST00000563590 PLPPR3Q6T4P5 718 aa16.57■□□□□ 0.24
CCDC187-201ENST00000563590 DNMT1P26358 1616 aaKnown RBP16.57■□□□□ 0.24
CCDC187-201ENST00000563590 NUP155O75694 1391 aa16.56■□□□□ 0.24
CCDC187-201ENST00000563590 NUP153P49790 1475 aaKnown RBP16.55■□□□□ 0.24
CCDC187-201ENST00000563590 NUP160Q12769 1436 aa16.54■□□□□ 0.24
CCDC187-201ENST00000563590 CANXP27824 592 aaKnown RBP16.53■□□□□ 0.24
CCDC187-201ENST00000563590 KIF14Q15058 1648 aa16.53■□□□□ 0.24
CCDC187-201ENST00000563590 TROQ12816 1431 aaPredicted RBP16.53■□□□□ 0.24
CCDC187-201ENST00000563590 EFCAB2Q5VUJ9 269 aa16.53■□□□□ 0.24
CCDC187-201ENST00000563590 NLRP13Q86W25 1043 aa16.53■□□□□ 0.24
CCDC187-201ENST00000563590 PDE3BQ13370 1112 aa16.53■□□□□ 0.24
CCDC187-201ENST00000563590 KIAA0556O60303 1618 aa16.52■□□□□ 0.24
CCDC187-201ENST00000563590 RALGAPBQ86X10 1494 aa16.51■□□□□ 0.23
CCDC187-201ENST00000563590 NUTM2DQ5VT03 806 aaPredicted RBP16.5■□□□□ 0.23
CCDC187-201ENST00000563590 KTN1Q86UP2 1357 aaKnown RBP16.49■□□□□ 0.23
CCDC187-201ENST00000563590 C20orf194Q5TEA3 1177 aa16.49■□□□□ 0.23
CCDC187-201ENST00000563590 POGKQ9P215 609 aa16.49■□□□□ 0.23
CCDC187-201ENST00000563590 PNNQ9H307 717 aaKnown RBP16.48■□□□□ 0.23
CCDC187-201ENST00000563590 AFAP1Q8N556 730 aa16.48■□□□□ 0.23
CCDC187-201ENST00000563590 ATP10BO94823 1461 aa16.47■□□□□ 0.23
CCDC187-201ENST00000563590 SAFB2Q14151 953 aaKnown RBP eCLIP16.47■□□□□ 0.23
CCDC187-201ENST00000563590 UHRF1BP1Q6BDS2 1440 aa16.47■□□□□ 0.23
CCDC187-201ENST00000563590 ANKRD30AQ9BXX3 1397 aa16.46■□□□□ 0.23
CCDC187-201ENST00000563590 CAMSAP2Q08AD1 1489 aa16.46■□□□□ 0.23
CCDC187-201ENST00000563590 FAM161AQ3B820 660 aa16.45■□□□□ 0.22
CCDC187-201ENST00000563590 PARD3Q8TEW0 1356 aa16.44■□□□□ 0.22
CCDC187-201ENST00000563590 HSP90AA2PQ14568 343 aaPredicted RBP16.44■□□□□ 0.22
CCDC187-201ENST00000563590 RAPGEF6Q8TEU7 1601 aa16.44■□□□□ 0.22
CCDC187-201ENST00000563590 HSP90AA1P07900 732 aaKnown RBP16.44■□□□□ 0.22
CCDC187-201ENST00000563590 NBPF1Q3BBV0 1214 aa16.44■□□□□ 0.22
CCDC187-201ENST00000563590 FAM43AQ8N2R8 423 aa16.44■□□□□ 0.22
CCDC187-201ENST00000563590 ANKRD50Q9ULJ7 1429 aa16.43■□□□□ 0.22
CCDC187-201ENST00000563590 BECN1Q14457 450 aa16.42■□□□□ 0.22
CCDC187-201ENST00000563590 ARID3AQ99856 593 aa16.42■□□□□ 0.22
CCDC187-201ENST00000563590 WDR43Q15061 677 aaKnown RBP eCLIP16.41■□□□□ 0.22
CCDC187-201ENST00000563590 CCDC146Q8IYE0 955 aa16.41■□□□□ 0.22
CCDC187-201ENST00000563590 PER1O15534 1290 aaPredicted RBP16.4■□□□□ 0.22
CCDC187-201ENST00000563590 UPF2Q9HAU5 1272 aaKnown RBP16.4■□□□□ 0.22
CCDC187-201ENST00000563590 SPAG9O60271 1321 aaKnown RBP16.4■□□□□ 0.22
CCDC187-201ENST00000563590 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.4■□□□□ 0.22
CCDC187-201ENST00000563590 GGT6Q6P531 493 aa16.39■□□□□ 0.21
CCDC187-201ENST00000563590 KDM2BQ8NHM5 1336 aa16.39■□□□□ 0.21
CCDC187-201ENST00000563590 KIF3BO15066 747 aa16.37■□□□□ 0.21
CCDC187-201ENST00000563590 C8orf34Q49A92 452 aa16.37■□□□□ 0.21
CCDC187-201ENST00000563590 L1TD1Q5T7N2 865 aaKnown RBP16.37■□□□□ 0.21
CCDC187-201ENST00000563590 GPATCH8Q9UKJ3 1502 aaKnown RBP16.37■□□□□ 0.21
CCDC187-201ENST00000563590 ERCC6L2Q5T890 1561 aa16.37■□□□□ 0.21
CCDC187-201ENST00000563590 CENPQQ7L2Z9 268 aaPredicted RBP16.37■□□□□ 0.21
CCDC187-201ENST00000563590 ZMYND15Q9H091 742 aa16.37■□□□□ 0.21
CCDC187-201ENST00000563590 PLEKHG5O94827 1062 aa16.36■□□□□ 0.21
CCDC187-201ENST00000563590 ARHGEF12Q9NZN5 1544 aa16.36■□□□□ 0.21
CCDC187-201ENST00000563590 ADGRL2O95490 1459 aa16.36■□□□□ 0.21
CCDC187-201ENST00000563590 ARHGAP5Q13017 1502 aa16.36■□□□□ 0.21
CCDC187-201ENST00000563590 TRIM44Q96DX7 344 aaPredicted RBP16.36■□□□□ 0.21
CCDC187-201ENST00000563590 PANK3Q9H999 370 aa16.36■□□□□ 0.21
CCDC187-201ENST00000563590 RRAGDQ9NQL2 400 aaPredicted RBP16.36■□□□□ 0.21
CCDC187-201ENST00000563590 E9PCH4 1651 aa16.35■□□□□ 0.21
CCDC187-201ENST00000563590 GOLGA6L3A6NEY3 463 aa16.35■□□□□ 0.21
CCDC187-201ENST00000563590 CHD1O14646 1710 aa16.35■□□□□ 0.21
CCDC187-201ENST00000563590 BLMP54132 1417 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms