RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 E2F4Q16254 413 aa7.96□□□□□ -1.14
LINC01416-201ENST00000563553 FBXW7Q969H0 707 aa7.95□□□□□ -1.14
LINC01416-201ENST00000563553 KCNH8Q96L42 1107 aa7.95□□□□□ -1.14
LINC01416-201ENST00000563553 KCTD12Q96CX2 325 aaKnown RBP7.94□□□□□ -1.14
LINC01416-201ENST00000563553 C6orf132Q5T0Z8 1188 aa7.94□□□□□ -1.14
LINC01416-201ENST00000563553 EPAS1Q99814 870 aa7.93□□□□□ -1.14
LINC01416-201ENST00000563553 TSR1Q2NL82 804 aaKnown RBP7.92□□□□□ -1.14
LINC01416-201ENST00000563553 HCSTQ9UBK5 93 aa7.92□□□□□ -1.14
LINC01416-201ENST00000563553 EN1Q05925 392 aaPredicted RBP7.91□□□□□ -1.14
LINC01416-201ENST00000563553 RBM33Q96EV2 1170 aaKnown RBP7.91□□□□□ -1.14
LINC01416-201ENST00000563553 SPDYE16A6NNV3 312 aaPredicted RBP7.9□□□□□ -1.15
LINC01416-201ENST00000563553 NBR1Q14596 966 aa7.9□□□□□ -1.15
LINC01416-201ENST00000563553 RABGEF1Q9UJ41 708 aa7.9□□□□□ -1.15
LINC01416-201ENST00000563553 THSD4Q6ZMP0 1018 aa7.89□□□□□ -1.15
LINC01416-201ENST00000563553 MRPL50Q8N5N7 158 aaKnown RBP7.87□□□□□ -1.15
LINC01416-201ENST00000563553 OSBPP22059 807 aa7.87□□□□□ -1.15
LINC01416-201ENST00000563553 KCNV2Q8TDN2 545 aa7.87□□□□□ -1.15
LINC01416-201ENST00000563553 WDR70Q9NW82 654 aa7.86□□□□□ -1.15
LINC01416-201ENST00000563553 KIAA1468Q9P260 1216 aa7.86□□□□□ -1.15
LINC01416-201ENST00000563553 C3orf80F5H4A9 247 aa7.86□□□□□ -1.15
LINC01416-201ENST00000563553 NBPF3Q9H094 633 aa7.86□□□□□ -1.15
LINC01416-201ENST00000563553 FAM198AQ9UFP1 575 aa7.86□□□□□ -1.15
LINC01416-201ENST00000563553 TSKSQ9UJT2 592 aa7.86□□□□□ -1.15
LINC01416-201ENST00000563553 TRIM6-TRIM34B2RNG4 842 aa7.85□□□□□ -1.15
LINC01416-201ENST00000563553 WNT2BQ93097 391 aa7.85□□□□□ -1.15
LINC01416-201ENST00000563553 PLA2G2EQ9NZK7 142 aa7.85□□□□□ -1.15
LINC01416-201ENST00000563553 PTPN5P54829 565 aa7.85□□□□□ -1.15
LINC01416-201ENST00000563553 CDHR5Q9HBB8 845 aa7.85□□□□□ -1.15
LINC01416-201ENST00000563553 MAP3K7O43318 606 aa7.84□□□□□ -1.15
LINC01416-201ENST00000563553 STAC3Q96MF2 364 aa7.84□□□□□ -1.15
LINC01416-201ENST00000563553 GRXCR2A6NFK2 248 aa7.84□□□□□ -1.15
LINC01416-201ENST00000563553 ONECUT3O60422 494 aaPredicted RBP7.84□□□□□ -1.15
LINC01416-201ENST00000563553 SEPT9Q9UHD8 586 aaPredicted RBP7.84□□□□□ -1.15
LINC01416-201ENST00000563553 MLLT3P42568 568 aaPredicted RBP7.81□□□□□ -1.16
LINC01416-201ENST00000563553 BCAMP50895 628 aa7.81□□□□□ -1.16
LINC01416-201ENST00000563553 LAPTM4BQ86VI4 370 aa7.81□□□□□ -1.16
LINC01416-201ENST00000563553 ZFRQ96KR1 1074 aaKnown RBP7.81□□□□□ -1.16
LINC01416-201ENST00000563553 NPDC1Q9NQX5 325 aaPredicted RBP7.81□□□□□ -1.16
LINC01416-201ENST00000563553 ARHGEF1Q92888 912 aaKnown RBP7.79□□□□□ -1.16
LINC01416-201ENST00000563553 CDCA7LQ96GN5 454 aa7.79□□□□□ -1.16
LINC01416-201ENST00000563553 SOWAHBA6NEL2 793 aa7.79□□□□□ -1.16
LINC01416-201ENST00000563553 PLCB2Q00722 1185 aa7.79□□□□□ -1.16
LINC01416-201ENST00000563553 GOLGA8CPA6NN73 597 aa7.78□□□□□ -1.16
LINC01416-201ENST00000563553 FAM98CQ17RN3 349 aaKnown RBP7.78□□□□□ -1.16
LINC01416-201ENST00000563553 PRSS12P56730 875 aa7.78□□□□□ -1.16
LINC01416-201ENST00000563553 ANKK1Q8NFD2 765 aa7.77□□□□□ -1.17
LINC01416-201ENST00000563553 SMAPO00193 183 aa7.77□□□□□ -1.17
LINC01416-201ENST00000563553 TTC13Q8NBP0 860 aa7.77□□□□□ -1.17
LINC01416-201ENST00000563553 WBP1LQ9NX94 342 aa7.75□□□□□ -1.17
LINC01416-201ENST00000563553 IFFO2Q5TF58 517 aa7.74□□□□□ -1.17
LINC01416-201ENST00000563553 CERKQ8TCT0 537 aa7.74□□□□□ -1.17
LINC01416-201ENST00000563553 RBM27Q9P2N5 1060 aaKnown RBP7.73□□□□□ -1.17
LINC01416-201ENST00000563553 PACS2Q86VP3 889 aa7.73□□□□□ -1.17
LINC01416-201ENST00000563553 ITGBL1O95965 494 aaPredicted RBP7.72□□□□□ -1.17
LINC01416-201ENST00000563553 PADI6Q6TGC4 694 aa7.72□□□□□ -1.17
LINC01416-201ENST00000563553 TATDN2Q93075 761 aa7.72□□□□□ -1.17
LINC01416-201ENST00000563553 SEMA3EO15041 775 aa7.71□□□□□ -1.18
LINC01416-201ENST00000563553 SAMD7Q7Z3H4 446 aa7.7□□□□□ -1.18
LINC01416-201ENST00000563553 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.7□□□□□ -1.18
LINC01416-201ENST00000563553 NUDT18Q6ZVK8 323 aa7.69□□□□□ -1.18
LINC01416-201ENST00000563553 PNMA3Q9UL41 463 aa7.69□□□□□ -1.18
LINC01416-201ENST00000563553 HPS5Q9UPZ3 1129 aa7.69□□□□□ -1.18
LINC01416-201ENST00000563553 PTGDRQ13258 359 aa7.69□□□□□ -1.18
LINC01416-201ENST00000563553 LRCH3Q96II8 777 aa7.69□□□□□ -1.18
LINC01416-201ENST00000563553 TSR3Q9UJK0 312 aaKnown RBP7.68□□□□□ -1.18
LINC01416-201ENST00000563553 KDM2AQ9Y2K7 1162 aa7.68□□□□□ -1.18
LINC01416-201ENST00000563553 A0A0G2JS52 829 aa7.68□□□□□ -1.18
LINC01416-201ENST00000563553 NBPF26B4DH59 902 aa7.68□□□□□ -1.18
LINC01416-201ENST00000563553 P3H3Q8IVL6 736 aa7.67□□□□□ -1.18
LINC01416-201ENST00000563553 NYAP1Q6ZVC0 841 aa7.67□□□□□ -1.18
LINC01416-201ENST00000563553 EYA1Q99502 592 aa7.67□□□□□ -1.18
LINC01416-201ENST00000563553 TESPA1A2RU30 521 aaPredicted RBP7.64□□□□□ -1.19
LINC01416-201ENST00000563553 GPR37O15354 613 aa7.62□□□□□ -1.19
LINC01416-201ENST00000563553 APLP1P51693 650 aa7.62□□□□□ -1.19
LINC01416-201ENST00000563553 FAM161AQ3B820 660 aa7.62□□□□□ -1.19
LINC01416-201ENST00000563553 TJAP1Q5JTD0 557 aa7.62□□□□□ -1.19
LINC01416-201ENST00000563553 SWT1Q5T5J6 900 aaKnown RBP7.62□□□□□ -1.19
LINC01416-201ENST00000563553 ADGRG1Q9Y653 693 aa7.62□□□□□ -1.19
LINC01416-201ENST00000563553 RBM26Q5T8P6 1007 aaKnown RBP7.61□□□□□ -1.19
LINC01416-201ENST00000563553 HAP1P54257 671 aaPredicted RBP7.6□□□□□ -1.19
LINC01416-201ENST00000563553 PPP4CP60510 307 aa7.6□□□□□ -1.19
LINC01416-201ENST00000563553 NUTM2FA1L443 756 aa7.59□□□□□ -1.19
LINC01416-201ENST00000563553 KCNC4Q03721 635 aa7.58□□□□□ -1.2
LINC01416-201ENST00000563553 FECHP22830 423 aa7.57□□□□□ -1.2
LINC01416-201ENST00000563553 MTRQ99707 1265 aa7.57□□□□□ -1.2
LINC01416-201ENST00000563553 RGS20O76081 388 aa7.56□□□□□ -1.2
LINC01416-201ENST00000563553 ZNF516Q92618 1163 aa7.56□□□□□ -1.2
LINC01416-201ENST00000563553 RNF40O75150 1001 aa7.56□□□□□ -1.2
LINC01416-201ENST00000563553 TMEM134Q9H6X4 195 aa7.56□□□□□ -1.2
LINC01416-201ENST00000563553 FCHSD2O94868 740 aa7.55□□□□□ -1.2
LINC01416-201ENST00000563553 RCCD1A6NED2 376 aa7.54□□□□□ -1.2
LINC01416-201ENST00000563553 DNAJB2P25686 324 aa7.53□□□□□ -1.2
LINC01416-201ENST00000563553 PXYLP1Q8TE99 480 aa7.53□□□□□ -1.2
LINC01416-201ENST00000563553 SLF2Q8IX21 1173 aa7.53□□□□□ -1.2
LINC01416-201ENST00000563553 HIC1Q14526 733 aa7.52□□□□□ -1.2
LINC01416-201ENST00000563553 RBM46Q8TBY0 533 aaKnown RBP7.52□□□□□ -1.21
LINC01416-201ENST00000563553 SLC10A3P09131 477 aa7.51□□□□□ -1.21
LINC01416-201ENST00000563553 METTL3Q86U44 580 aaKnown RBP7.51□□□□□ -1.21
LINC01416-201ENST00000563553 NKX2-3Q8TAU0 364 aa7.51□□□□□ -1.21
LINC01416-201ENST00000563553 IL21Q9HBE4 155 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms