RNA–Protein interactions for RNA: ENST00000563346.1

TSC2-219, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-219ENST00000563346 SPATA31D1Q6ZQQ2 1576 aa27.26■■□□□ 1.95
TSC2-219ENST00000563346 SOCS7O14512 581 aa27.25■■□□□ 1.95
TSC2-219ENST00000563346 KDM5DQ9BY66 1539 aa27.25■■□□□ 1.95
TSC2-219ENST00000563346 NCKAP5LQ9HCH0 1330 aa27.24■■□□□ 1.95
TSC2-219ENST00000563346 WASHC2CQ9Y4E1 1318 aa27.24■■□□□ 1.95
TSC2-219ENST00000563346 APLP2Q06481 763 aa27.24■■□□□ 1.95
TSC2-219ENST00000563346 FAM135AQ9P2D6 1515 aa27.24■■□□□ 1.95
TSC2-219ENST00000563346 MYOM3Q5VTT5 1437 aa27.24■■□□□ 1.95
TSC2-219ENST00000563346 MIA2Q96PC5 1412 aa27.23■■□□□ 1.95
TSC2-219ENST00000563346 PLA2R1Q13018 1463 aa27.22■■□□□ 1.95
TSC2-219ENST00000563346 LTBP4Q8N2S1 1624 aa27.21■■□□□ 1.95
TSC2-219ENST00000563346 PKD2Q13563 968 aa27.21■■□□□ 1.95
TSC2-219ENST00000563346 MAST1Q9Y2H9 1570 aa27.21■■□□□ 1.95
TSC2-219ENST00000563346 A2ML1A8K2U0 1454 aa27.19■■□□□ 1.94
TSC2-219ENST00000563346 PZPP20742 1482 aa27.19■■□□□ 1.94
TSC2-219ENST00000563346 FBXO31Q5XUX0 539 aaPredicted RBP27.18■■□□□ 1.94
TSC2-219ENST00000563346 TNRQ92752 1358 aa27.18■■□□□ 1.94
TSC2-219ENST00000563346 TCOF1Q13428 1488 aaKnown RBP27.15■■□□□ 1.94
TSC2-219ENST00000563346 DNMT1P26358 1616 aaKnown RBP27.15■■□□□ 1.94
TSC2-219ENST00000563346 RNF17Q9BXT8 1623 aaKnown RBP27.12■■□□□ 1.93
TSC2-219ENST00000563346 EIF2AK4Q9P2K8 1649 aaKnown RBP27.11■■□□□ 1.93
TSC2-219ENST00000563346 IQSEC2Q5JU85 1478 aa27.1■■□□□ 1.93
TSC2-219ENST00000563346 ZNF335Q9H4Z2 1342 aaPredicted RBP27.09■■□□□ 1.93
TSC2-219ENST00000563346 ZC3H13Q5T200 1668 aaKnown RBP27.08■■□□□ 1.93
TSC2-219ENST00000563346 PTPN23Q9H3S7 1636 aa27.07■■□□□ 1.92
TSC2-219ENST00000563346 ABCC3O15438 1527 aa27.06■■□□□ 1.92
TSC2-219ENST00000563346 DUOX2Q9NRD8 1548 aa27.06■■□□□ 1.92
TSC2-219ENST00000563346 UBAP1LF5GYI3 381 aa27.05■■□□□ 1.92
TSC2-219ENST00000563346 NLRP1Q9C000 1473 aa27.05■■□□□ 1.92
TSC2-219ENST00000563346 POLR1AO95602 1720 aaPredicted RBP27.04■■□□□ 1.92
TSC2-219ENST00000563346 CROCC2H7BZ55 1655 aa27.04■■□□□ 1.92
TSC2-219ENST00000563346 THEMISQ8N1K5 641 aaPredicted RBP27.03■■□□□ 1.92
TSC2-219ENST00000563346 SHANK2Q9UPX8 1470 aa27.02■■□□□ 1.92
TSC2-219ENST00000563346 ABCC5O15440 1437 aa27.02■■□□□ 1.92
TSC2-219ENST00000563346 KIF15Q9NS87 1388 aa27.01■■□□□ 1.91
TSC2-219ENST00000563346 UGGT1Q9NYU2 1555 aa27.01■■□□□ 1.91
TSC2-219ENST00000563346 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27■■□□□ 1.91
TSC2-219ENST00000563346 RRP7BPQ9NSQ0 103 aa27■■□□□ 1.91
TSC2-219ENST00000563346 MROH1Q8NDA8 1641 aa27■■□□□ 1.91
TSC2-219ENST00000563346 FGD6Q6ZV73 1430 aa26.99■■□□□ 1.91
TSC2-219ENST00000563346 CEP152O94986 1710 aa26.99■■□□□ 1.91
TSC2-219ENST00000563346 ANKLE2Q86XL3 938 aa26.99■■□□□ 1.91
TSC2-219ENST00000563346 DAPK1P53355 1430 aa26.99■■□□□ 1.91
TSC2-219ENST00000563346 NEURL4Q96JN8 1562 aa26.97■■□□□ 1.91
TSC2-219ENST00000563346 ERBINQ96RT1 1412 aa26.96■■□□□ 1.91
TSC2-219ENST00000563346 ERVK-7P63135 1459 aa26.95■■□□□ 1.91
TSC2-219ENST00000563346 SCAF1Q9H7N4 1312 aaKnown RBP26.93■■□□□ 1.9
TSC2-219ENST00000563346 PRDM15P57071 1507 aaPredicted RBP26.91■■□□□ 1.9
TSC2-219ENST00000563346 CFAP65Q6ZU64 1925 aaKnown RBP26.91■■□□□ 1.9
TSC2-219ENST00000563346 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.91■■□□□ 1.96e-9■■□□□ 11.5
TSC2-219ENST00000563346 CHIC2Q9UKJ5 165 aa26.91■■□□□ 1.9
TSC2-219ENST00000563346 ANKRD30AQ9BXX3 1397 aa26.9■■□□□ 1.9
TSC2-219ENST00000563346 DEPDC5O75140 1603 aa26.89■■□□□ 1.9
TSC2-219ENST00000563346 NPHP4O75161 1426 aaPredicted RBP26.89■■□□□ 1.89
TSC2-219ENST00000563346 KANK1Q14678 1352 aa26.88■■□□□ 1.89
TSC2-219ENST00000563346 CPS1P31327 1500 aa26.87■■□□□ 1.89
TSC2-219ENST00000563346 MED14O60244 1454 aa26.87■■□□□ 1.89
TSC2-219ENST00000563346 PIP4K2BP78356 416 aa26.86■■□□□ 1.89
TSC2-219ENST00000563346 ARHGAP31Q2M1Z3 1444 aa26.85■■□□□ 1.89
TSC2-219ENST00000563346 FAM50AQ14320 339 aaKnown RBP26.84■■□□□ 1.89
TSC2-219ENST00000563346 IQGAP1P46940 1657 aa26.84■■□□□ 1.89
TSC2-219ENST00000563346 UBR1Q8IWV7 1749 aa26.82■■□□□ 1.88
TSC2-219ENST00000563346 VWDEQ8N2E2 1590 aa26.81■■□□□ 1.88
TSC2-219ENST00000563346 HSPA1LP34931 641 aa26.79■■□□□ 1.88
TSC2-219ENST00000563346 ADGRL2O95490 1459 aa26.76■■□□□ 1.87
TSC2-219ENST00000563346 TOM1O60784 492 aa26.75■■□□□ 1.87
TSC2-219ENST00000563346 SCAF11Q99590 1463 aaKnown RBP26.74■■□□□ 1.87
TSC2-219ENST00000563346 SENP3Q9H4L4 574 aaPredicted RBP26.74■■□□□ 1.87
TSC2-219ENST00000563346 STAG3Q9UJ98 1225 aa26.74■■□□□ 1.87
TSC2-219ENST00000563346 LMTK2Q8IWU2 1503 aa26.74■■□□□ 1.87
TSC2-219ENST00000563346 TXNDC2Q86VQ3 553 aa26.73■■□□□ 1.87
TSC2-219ENST00000563346 PIK3C2BO00750 1634 aa26.72■■□□□ 1.87
TSC2-219ENST00000563346 MED1Q15648 1581 aaPredicted RBP26.72■■□□□ 1.87
TSC2-219ENST00000563346 EID1Q9Y6B2 187 aa26.72■■□□□ 1.87
TSC2-219ENST00000563346 SLIT1O75093 1534 aa26.71■■□□□ 1.87
TSC2-219ENST00000563346 ARHGAP23Q9P227 1491 aa26.71■■□□□ 1.87
TSC2-219ENST00000563346 LTKP29376 864 aa26.69■■□□□ 1.86
TSC2-219ENST00000563346 ANKRD50Q9ULJ7 1429 aa26.68■■□□□ 1.86
TSC2-219ENST00000563346 EFCAB6Q5THR3 1501 aa26.68■■□□□ 1.86
TSC2-219ENST00000563346 STRCP1A6NGW2 1772 aa26.66■■□□□ 1.86
TSC2-219ENST00000563346 IDI1Q13907 227 aa26.65■■□□□ 1.86
TSC2-219ENST00000563346 TMEM2Q9UHN6 1383 aa26.65■■□□□ 1.86
TSC2-219ENST00000563346 SYNMO15061 1565 aa26.65■■□□□ 1.86
TSC2-219ENST00000563346 KDM5AP29375 1690 aaKnown RBP26.64■■□□□ 1.86
TSC2-219ENST00000563346 LRRC7Q96NW7 1537 aa26.63■■□□□ 1.85
TSC2-219ENST00000563346 NOS1P29475 1434 aa26.62■■□□□ 1.85
TSC2-219ENST00000563346 PHF23Q9BUL5 403 aaPredicted RBP26.59■■□□□ 1.85
TSC2-219ENST00000563346 SLC52A1Q9NWF4 448 aa26.59■■□□□ 1.85
TSC2-219ENST00000563346 RPRD2Q5VT52 1461 aaKnown RBP26.58■■□□□ 1.85
TSC2-219ENST00000563346 ADGRB3O60242 1522 aa26.57■■□□□ 1.84
TSC2-219ENST00000563346 TET3O43151 1660 aa26.57■■□□□ 1.84
TSC2-219ENST00000563346 ROCK1Q13464 1354 aa26.54■■□□□ 1.84
TSC2-219ENST00000563346 UNC13BO14795 1591 aa26.54■■□□□ 1.84
TSC2-219ENST00000563346 ALKQ9UM73 1620 aa26.54■■□□□ 1.84
TSC2-219ENST00000563346 ITGAEP38570 1179 aa26.53■■□□□ 1.84
TSC2-219ENST00000563346 PPARGC1BQ86YN6 1023 aaKnown RBP26.53■■□□□ 1.84
TSC2-219ENST00000563346 GCC2Q8IWJ2 1684 aa26.52■■□□□ 1.84
TSC2-219ENST00000563346 BCANQ96GW7 911 aa26.5■■□□□ 1.83
TSC2-219ENST00000563346 SLC26A8Q96RN1 970 aa26.49■■□□□ 1.83
TSC2-219ENST00000563346 XIRP1Q702N8 1843 aaKnown RBP26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms