RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 SPDYE16A6NNV3 312 aaPredicted RBP10.2□□□□□ -0.78
CNOT1-205ENST00000563283 PTPREP23469 700 aa10.2□□□□□ -0.78
CNOT1-205ENST00000563283 TYW1BQ6NUM6 668 aa10.2□□□□□ -0.78
CNOT1-205ENST00000563283 FBXW7Q969H0 707 aa10.19□□□□□ -0.78
CNOT1-205ENST00000563283 RNF166Q96A37 237 aaPredicted RBP10.19□□□□□ -0.78
CNOT1-205ENST00000563283 EPAS1Q99814 870 aa10.18□□□□□ -0.78
CNOT1-205ENST00000563283 SLC4A5Q9BY07 1137 aa10.16□□□□□ -0.78
CNOT1-205ENST00000563283 HRO43593 1189 aa10.15□□□□□ -0.78
CNOT1-205ENST00000563283 DDX12PQ92771 950 aa10.15□□□□□ -0.78
CNOT1-205ENST00000563283 VPS9D1Q9Y2B5 631 aa10.14□□□□□ -0.79
CNOT1-205ENST00000563283 PPP1R3GB7ZBB8 358 aa10.13□□□□□ -0.79
CNOT1-205ENST00000563283 ZBED2Q9BTP6 218 aa10.13□□□□□ -0.79
CNOT1-205ENST00000563283 BICRAQ9NZM4 1560 aa10.13□□□□□ -0.79
CNOT1-205ENST00000563283 KCNV2Q8TDN2 545 aa10.12□□□□□ -0.79
CNOT1-205ENST00000563283 NBR1Q14596 966 aa10.11□□□□□ -0.79
CNOT1-205ENST00000563283 ARHGEF1Q92888 912 aaKnown RBP10.11□□□□□ -0.79
CNOT1-205ENST00000563283 COL9A1P20849 921 aa10.09□□□□□ -0.79
CNOT1-205ENST00000563283 EN1Q05925 392 aaPredicted RBP10.09□□□□□ -0.79
CNOT1-205ENST00000563283 C6orf132Q5T0Z8 1188 aa10.09□□□□□ -0.79
CNOT1-205ENST00000563283 RBM33Q96EV2 1170 aaKnown RBP10.08□□□□□ -0.8
CNOT1-205ENST00000563283 HAP1P54257 671 aaPredicted RBP10.07□□□□□ -0.8
CNOT1-205ENST00000563283 P3H3Q8IVL6 736 aa10.07□□□□□ -0.8
CNOT1-205ENST00000563283 BHMG1C9JSJ3 638 aaPredicted RBP10.06□□□□□ -0.8
CNOT1-205ENST00000563283 GRXCR2A6NFK2 248 aa10.05□□□□□ -0.8
CNOT1-205ENST00000563283 MAP3K7O43318 606 aa10.05□□□□□ -0.8
CNOT1-205ENST00000563283 STAC3Q96MF2 364 aa10.05□□□□□ -0.8
CNOT1-205ENST00000563283 SCRIBQ14160 1630 aa10.04□□□□□ -0.8
CNOT1-205ENST00000563283 PRIM1P49642 420 aaKnown RBP10.04□□□□□ -0.8
CNOT1-205ENST00000563283 OSBPP22059 807 aa10.03□□□□□ -0.8
CNOT1-205ENST00000563283 TSR1Q2NL82 804 aaKnown RBP10.03□□□□□ -0.8
CNOT1-205ENST00000563283 PROX2Q3B8N5 592 aa10.03□□□□□ -0.8
CNOT1-205ENST00000563283 NBPF3Q9H094 633 aa10.02□□□□□ -0.81
CNOT1-205ENST00000563283 RABGEF1Q9UJ41 708 aa10.02□□□□□ -0.81
CNOT1-205ENST00000563283 ONECUT3O60422 494 aaPredicted RBP10.01□□□□□ -0.81
CNOT1-205ENST00000563283 MRPL50Q8N5N7 158 aaKnown RBP10□□□□□ -0.81
CNOT1-205ENST00000563283 TRIM6-TRIM34B2RNG4 842 aa9.99□□□□□ -0.81
CNOT1-205ENST00000563283 KCTD12Q96CX2 325 aaKnown RBP9.98□□□□□ -0.81
CNOT1-205ENST00000563283 MLLT3P42568 568 aaPredicted RBP9.97□□□□□ -0.81
CNOT1-205ENST00000563283 CERKQ8TCT0 537 aa9.97□□□□□ -0.81
CNOT1-205ENST00000563283 HCSTQ9UBK5 93 aa9.97□□□□□ -0.81
CNOT1-205ENST00000563283 CDHR5Q9HBB8 845 aa9.96□□□□□ -0.82
CNOT1-205ENST00000563283 KIAA1468Q9P260 1216 aa9.96□□□□□ -0.82
CNOT1-205ENST00000563283 KDM2AQ9Y2K7 1162 aa9.96□□□□□ -0.82
CNOT1-205ENST00000563283 LAPTM4BQ86VI4 370 aa9.95□□□□□ -0.82
CNOT1-205ENST00000563283 GOLGA8CPA6NN73 597 aa9.94□□□□□ -0.82
CNOT1-205ENST00000563283 PRSS12P56730 875 aa9.93□□□□□ -0.82
CNOT1-205ENST00000563283 THSD4Q6ZMP0 1018 aa9.93□□□□□ -0.82
CNOT1-205ENST00000563283 WNT2BQ93097 391 aa9.93□□□□□ -0.82
CNOT1-205ENST00000563283 TSKSQ9UJT2 592 aa9.93□□□□□ -0.82
CNOT1-205ENST00000563283 VSIG10Q8N0Z9 540 aa9.92□□□□□ -0.82
CNOT1-205ENST00000563283 CDCA7LQ96GN5 454 aa9.92□□□□□ -0.82
CNOT1-205ENST00000563283 SEMA3EO15041 775 aa9.91□□□□□ -0.82
CNOT1-205ENST00000563283 RBM27Q9P2N5 1060 aaKnown RBP9.91□□□□□ -0.82
CNOT1-205ENST00000563283 PACS2Q86VP3 889 aa9.9□□□□□ -0.82
CNOT1-205ENST00000563283 FAM198AQ9UFP1 575 aa9.9□□□□□ -0.82
CNOT1-205ENST00000563283 SEPT9Q9UHD8 586 aaPredicted RBP9.9□□□□□ -0.82
CNOT1-205ENST00000563283 FAM98CQ17RN3 349 aaKnown RBP9.89□□□□□ -0.83
CNOT1-205ENST00000563283 ANKK1Q8NFD2 765 aa9.89□□□□□ -0.83
CNOT1-205ENST00000563283 NPDC1Q9NQX5 325 aaPredicted RBP9.89□□□□□ -0.83
CNOT1-205ENST00000563283 ZFRQ96KR1 1074 aaKnown RBP9.88□□□□□ -0.83
CNOT1-205ENST00000563283 SHROOM4Q9ULL8 1493 aa9.87□□□□□ -0.83
CNOT1-205ENST00000563283 TESPA1A2RU30 521 aaPredicted RBP9.87□□□□□ -0.83
CNOT1-205ENST00000563283 PTPN5P54829 565 aa9.87□□□□□ -0.83
CNOT1-205ENST00000563283 NBPF26B4DH59 902 aa9.86□□□□□ -0.83
CNOT1-205ENST00000563283 TTC13Q8NBP0 860 aa9.86□□□□□ -0.83
CNOT1-205ENST00000563283 SOWAHBA6NEL2 793 aa9.84□□□□□ -0.83
CNOT1-205ENST00000563283 PADI6Q6TGC4 694 aa9.84□□□□□ -0.83
CNOT1-205ENST00000563283 C3orf80F5H4A9 247 aa9.83□□□□□ -0.84
CNOT1-205ENST00000563283 BCAMP50895 628 aa9.83□□□□□ -0.84
CNOT1-205ENST00000563283 PTGDRQ13258 359 aa9.83□□□□□ -0.84
CNOT1-205ENST00000563283 TATDN2Q93075 761 aa9.83□□□□□ -0.84
CNOT1-205ENST00000563283 PNMA3Q9UL41 463 aa9.83□□□□□ -0.84
CNOT1-205ENST00000563283 SMAPO00193 183 aa9.82□□□□□ -0.84
CNOT1-205ENST00000563283 SMYD5Q6GMV2 418 aa9.81□□□□□ -0.84
CNOT1-205ENST00000563283 PLA2G2EQ9NZK7 142 aa9.81□□□□□ -0.84
CNOT1-205ENST00000563283 NUTM2FA1L443 756 aa9.8□□□□□ -0.84
CNOT1-205ENST00000563283 NUDT18Q6ZVK8 323 aa9.8□□□□□ -0.84
CNOT1-205ENST00000563283 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.8□□□□□ -0.84
CNOT1-205ENST00000563283 LRCH3Q96II8 777 aa9.79□□□□□ -0.84
CNOT1-205ENST00000563283 EIF4G1Q04637 1599 aaKnown RBP9.79□□□□□ -0.84
CNOT1-205ENST00000563283 FCHSD2O94868 740 aa9.77□□□□□ -0.85
CNOT1-205ENST00000563283 NYAP1Q6ZVC0 841 aa9.77□□□□□ -0.85
CNOT1-205ENST00000563283 CC2D2AQ9P2K1 1620 aa9.76□□□□□ -0.85
CNOT1-205ENST00000563283 RBM26Q5T8P6 1007 aaKnown RBP9.76□□□□□ -0.85
CNOT1-205ENST00000563283 SAMD7Q7Z3H4 446 aa9.76□□□□□ -0.85
CNOT1-205ENST00000563283 TSR3Q9UJK0 312 aaKnown RBP9.76□□□□□ -0.85
CNOT1-205ENST00000563283 WBP1LQ9NX94 342 aa9.75□□□□□ -0.85
CNOT1-205ENST00000563283 HPS5Q9UPZ3 1129 aa9.75□□□□□ -0.85
CNOT1-205ENST00000563283 EYA1Q99502 592 aa9.74□□□□□ -0.85
CNOT1-205ENST00000563283 GPR37O15354 613 aa9.72□□□□□ -0.85
CNOT1-205ENST00000563283 HIC1Q14526 733 aa9.72□□□□□ -0.85
CNOT1-205ENST00000563283 IFFO2Q5TF58 517 aa9.72□□□□□ -0.85
CNOT1-205ENST00000563283 ADGRG1Q9Y653 693 aa9.72□□□□□ -0.85
CNOT1-205ENST00000563283 CECR2Q9BXF3 1484 aa9.72□□□□□ -0.85
CNOT1-205ENST00000563283 HDGFP51858 240 aaKnown RBP9.7□□□□□ -0.86
CNOT1-205ENST00000563283 PPP4CP60510 307 aa9.7□□□□□ -0.86
CNOT1-205ENST00000563283 RBM46Q8TBY0 533 aaKnown RBP9.7□□□□□ -0.86
CNOT1-205ENST00000563283 ITGBL1O95965 494 aaPredicted RBP9.69□□□□□ -0.86
CNOT1-205ENST00000563283 SWT1Q5T5J6 900 aaKnown RBP9.69□□□□□ -0.86
CNOT1-205ENST00000563283 GNPATO15228 680 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms