RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 NYAP1Q6ZVC0 841 aa10.05□□□□□ -0.8
HDGFL3-202ENST00000562702 PCDHGA10Q9Y5H3 936 aa10.05□□□□□ -0.8
HDGFL3-202ENST00000562702 PROX2Q3B8N5 592 aa10.02□□□□□ -0.81
HDGFL3-202ENST00000562702 EPAS1Q99814 870 aa10.02□□□□□ -0.81
HDGFL3-202ENST00000562702 EMILIN3Q9NT22 766 aa10.02□□□□□ -0.81
HDGFL3-202ENST00000562702 ONECUT3O60422 494 aaPredicted RBP10.01□□□□□ -0.81
HDGFL3-202ENST00000562702 SOWAHBA6NEL2 793 aa10□□□□□ -0.81
HDGFL3-202ENST00000562702 ITGBL1O95965 494 aaPredicted RBP9.99□□□□□ -0.81
HDGFL3-202ENST00000562702 COL9A1P20849 921 aa9.99□□□□□ -0.81
HDGFL3-202ENST00000562702 KIAA1468Q9P260 1216 aa9.99□□□□□ -0.81
HDGFL3-202ENST00000562702 BCAMP50895 628 aa9.98□□□□□ -0.81
HDGFL3-202ENST00000562702 ZFRQ96KR1 1074 aaKnown RBP9.98□□□□□ -0.81
HDGFL3-202ENST00000562702 KCNC4Q03721 635 aa9.96□□□□□ -0.82
HDGFL3-202ENST00000562702 C6orf132Q5T0Z8 1188 aa9.95□□□□□ -0.82
HDGFL3-202ENST00000562702 TRIM6-TRIM34B2RNG4 842 aa9.93□□□□□ -0.82
HDGFL3-202ENST00000562702 FAM98CQ17RN3 349 aaKnown RBP9.93□□□□□ -0.82
HDGFL3-202ENST00000562702 LRCH3Q96II8 777 aa9.92□□□□□ -0.82
HDGFL3-202ENST00000562702 WBP1LQ9NX94 342 aa9.92□□□□□ -0.82
HDGFL3-202ENST00000562702 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.92□□□□□ -0.82
HDGFL3-202ENST00000562702 SEPT9Q9UHD8 586 aaPredicted RBP9.92□□□□□ -0.82
HDGFL3-202ENST00000562702 DPYSL4O14531 572 aa9.91□□□□□ -0.82
HDGFL3-202ENST00000562702 CAMK2BQ13554 666 aa9.91□□□□□ -0.82
HDGFL3-202ENST00000562702 TSR3Q9UJK0 312 aaKnown RBP9.91□□□□□ -0.82
HDGFL3-202ENST00000562702 PACS2Q86VP3 889 aa9.9□□□□□ -0.82
HDGFL3-202ENST00000562702 RBM33Q96EV2 1170 aaKnown RBP9.9□□□□□ -0.82
HDGFL3-202ENST00000562702 Q6ZNB5 142 aa9.89□□□□□ -0.83
HDGFL3-202ENST00000562702 CADPS2Q86UW7 1296 aa9.89□□□□□ -0.83
HDGFL3-202ENST00000562702 HPS5Q9UPZ3 1129 aa9.88□□□□□ -0.83
HDGFL3-202ENST00000562702 LAPTM4AQ15012 233 aa9.87□□□□□ -0.83
HDGFL3-202ENST00000562702 DDX12PQ92771 950 aa9.87□□□□□ -0.83
HDGFL3-202ENST00000562702 MAP3K7O43318 606 aa9.85□□□□□ -0.83
HDGFL3-202ENST00000562702 PPP4CP60510 307 aa9.84□□□□□ -0.83
HDGFL3-202ENST00000562702 NBR1Q14596 966 aa9.84□□□□□ -0.83
HDGFL3-202ENST00000562702 SPDYE16A6NNV3 312 aaPredicted RBP9.82□□□□□ -0.84
HDGFL3-202ENST00000562702 EN1Q05925 392 aaPredicted RBP9.82□□□□□ -0.84
HDGFL3-202ENST00000562702 CERKQ8TCT0 537 aa9.81□□□□□ -0.84
HDGFL3-202ENST00000562702 HDGFP51858 240 aaKnown RBP9.79□□□□□ -0.84
HDGFL3-202ENST00000562702 PDIA6Q15084 440 aa9.78□□□□□ -0.84
HDGFL3-202ENST00000562702 TSKSQ9UJT2 592 aa9.78□□□□□ -0.84
HDGFL3-202ENST00000562702 NBPF26B4DH59 902 aa9.76□□□□□ -0.85
HDGFL3-202ENST00000562702 TSR1Q2NL82 804 aaKnown RBP9.76□□□□□ -0.85
HDGFL3-202ENST00000562702 BBXQ8WY36 941 aaPredicted RBP9.76□□□□□ -0.85
HDGFL3-202ENST00000562702 CDCA7LQ96GN5 454 aa9.76□□□□□ -0.85
HDGFL3-202ENST00000562702 PRSS12P56730 875 aa9.75□□□□□ -0.85
HDGFL3-202ENST00000562702 NECTIN2Q92692 538 aa9.75□□□□□ -0.85
HDGFL3-202ENST00000562702 GFRA3O60609 400 aa9.74□□□□□ -0.85
HDGFL3-202ENST00000562702 SAMD7Q7Z3H4 446 aa9.74□□□□□ -0.85
HDGFL3-202ENST00000562702 IL21Q9HBE4 155 aa9.73□□□□□ -0.85
HDGFL3-202ENST00000562702 WDR70Q9NW82 654 aa9.72□□□□□ -0.85
HDGFL3-202ENST00000562702 PNMA3Q9UL41 463 aa9.72□□□□□ -0.85
HDGFL3-202ENST00000562702 TJAP1Q5JTD0 557 aa9.71□□□□□ -0.86
HDGFL3-202ENST00000562702 TATDN2Q93075 761 aa9.71□□□□□ -0.86
HDGFL3-202ENST00000562702 GRXCR2A6NFK2 248 aa9.7□□□□□ -0.86
HDGFL3-202ENST00000562702 SMAPO00193 183 aa9.7□□□□□ -0.86
HDGFL3-202ENST00000562702 RNF40O75150 1001 aa9.7□□□□□ -0.86
HDGFL3-202ENST00000562702 SLC4A3P48751 1232 aa9.7□□□□□ -0.86
HDGFL3-202ENST00000562702 E2F4Q16254 413 aa9.7□□□□□ -0.86
HDGFL3-202ENST00000562702 TRAF7Q6Q0C0 670 aa9.7□□□□□ -0.86
HDGFL3-202ENST00000562702 PRKD2Q9BZL6 878 aa9.7□□□□□ -0.86
HDGFL3-202ENST00000562702 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.7□□□□□ -0.86
HDGFL3-202ENST00000562702 SPRYD3Q8NCJ5 442 aa9.69□□□□□ -0.86
HDGFL3-202ENST00000562702 MTRQ99707 1265 aa9.69□□□□□ -0.86
HDGFL3-202ENST00000562702 V9GY48 417 aaPredicted RBP9.69□□□□□ -0.86
HDGFL3-202ENST00000562702 NRG2O14511 850 aaPredicted RBP9.67□□□□□ -0.86
HDGFL3-202ENST00000562702 GGCXP38435 758 aa9.67□□□□□ -0.86
HDGFL3-202ENST00000562702 RBM27Q9P2N5 1060 aaKnown RBP9.67□□□□□ -0.86
HDGFL3-202ENST00000562702 PPP1R18Q6NYC8 613 aa9.66□□□□□ -0.86
HDGFL3-202ENST00000562702 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.65□□□□□ -0.86
HDGFL3-202ENST00000562702 ARIH1Q9Y4X5 557 aaPredicted RBP9.65□□□□□ -0.86
HDGFL3-202ENST00000562702 NUDT18Q6ZVK8 323 aa9.64□□□□□ -0.87
HDGFL3-202ENST00000562702 FAM198AQ9UFP1 575 aa9.63□□□□□ -0.87
HDGFL3-202ENST00000562702 SLF2Q8IX21 1173 aa9.62□□□□□ -0.87
HDGFL3-202ENST00000562702 PRR14Q9BWN1 585 aa9.61□□□□□ -0.87
HDGFL3-202ENST00000562702 APLP1P51693 650 aa9.59□□□□□ -0.87
HDGFL3-202ENST00000562702 ZNF516Q92618 1163 aa9.59□□□□□ -0.87
HDGFL3-202ENST00000562702 OSBPP22059 807 aa9.58□□□□□ -0.88
HDGFL3-202ENST00000562702 TMUB1Q9BVT8 246 aa9.58□□□□□ -0.88
HDGFL3-202ENST00000562702 PDZRN3Q9UPQ7 1066 aa9.58□□□□□ -0.88
HDGFL3-202ENST00000562702 CDHR5Q9HBB8 845 aa9.57□□□□□ -0.88
HDGFL3-202ENST00000562702 C3orf80F5H4A9 247 aa9.56□□□□□ -0.88
HDGFL3-202ENST00000562702 PRIM1P49642 420 aaKnown RBP9.56□□□□□ -0.88
HDGFL3-202ENST00000562702 COPS2P61201 443 aa9.56□□□□□ -0.88
HDGFL3-202ENST00000562702 SWT1Q5T5J6 900 aaKnown RBP9.56□□□□□ -0.88
HDGFL3-202ENST00000562702 PADI6Q6TGC4 694 aa9.54□□□□□ -0.88
HDGFL3-202ENST00000562702 ZNF787Q6DD87 383 aa9.53□□□□□ -0.88
HDGFL3-202ENST00000562702 NKX2-3Q8TAU0 364 aa9.53□□□□□ -0.88
HDGFL3-202ENST00000562702 CFAP44Q96MT7 982 aa9.53□□□□□ -0.88
HDGFL3-202ENST00000562702 LCE2BO14633 110 aa9.52□□□□□ -0.89
HDGFL3-202ENST00000562702 ZPR1O75312 459 aa9.52□□□□□ -0.89
HDGFL3-202ENST00000562702 PAXIP1Q6ZW49 1069 aaPredicted RBP9.52□□□□□ -0.89
HDGFL3-202ENST00000562702 TTC13Q8NBP0 860 aa9.52□□□□□ -0.89
HDGFL3-202ENST00000562702 PCDHB3Q9Y5E6 796 aa9.52□□□□□ -0.89
HDGFL3-202ENST00000562702 EYA1Q99502 592 aa9.47□□□□□ -0.89
HDGFL3-202ENST00000562702 NPDC1Q9NQX5 325 aaPredicted RBP9.47□□□□□ -0.89
HDGFL3-202ENST00000562702 SLC19A1P41440 591 aa9.46□□□□□ -0.9
HDGFL3-202ENST00000562702 KMT5BQ4FZB7 885 aa9.46□□□□□ -0.9
HDGFL3-202ENST00000562702 RBM46Q8TBY0 533 aaKnown RBP9.46□□□□□ -0.9
HDGFL3-202ENST00000562702 DNAJB2P25686 324 aa9.45□□□□□ -0.9
HDGFL3-202ENST00000562702 PKDCCQ504Y2 493 aa9.44□□□□□ -0.9
HDGFL3-202ENST00000562702 BLOC1S3Q6QNY0 202 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms