RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 PPP1R15AO75807 674 aaPredicted RBP10.6□□□□□ -0.71
CFDP1-202ENST00000562602 PLSCR2Q9NRY7 297 aa10.6□□□□□ -0.71
CFDP1-202ENST00000562602 AKNAQ7Z591 1439 aa10.59□□□□□ -0.71
CFDP1-202ENST00000562602 CCER2I3L3R5 266 aa10.59□□□□□ -0.71
CFDP1-202ENST00000562602 RIOK3O14730 519 aaKnown RBP10.59□□□□□ -0.71
CFDP1-202ENST00000562602 TDRD9Q8NDG6 1382 aaKnown RBP10.58□□□□□ -0.72
CFDP1-202ENST00000562602 TONSLQ96HA7 1378 aa10.58□□□□□ -0.72
CFDP1-202ENST00000562602 PCDH10Q9P2E7 1040 aa10.58□□□□□ -0.72
CFDP1-202ENST00000562602 SUPT6HQ7KZ85 1726 aaKnown RBP10.58□□□□□ -0.72
CFDP1-202ENST00000562602 NCOA2Q15596 1464 aa10.57□□□□□ -0.72
CFDP1-202ENST00000562602 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.57□□□□□ -0.72
CFDP1-202ENST00000562602 ZFP91Q96JP5 570 aaPredicted RBP10.57□□□□□ -0.72
CFDP1-202ENST00000562602 MIA2Q96PC5 1412 aa10.57□□□□□ -0.72
CFDP1-202ENST00000562602 TCOF1Q13428 1488 aaKnown RBP10.55□□□□□ -0.72
CFDP1-202ENST00000562602 ARHGEF11O15085 1522 aa10.55□□□□□ -0.72
CFDP1-202ENST00000562602 MRC2Q9UBG0 1479 aa10.55□□□□□ -0.72
CFDP1-202ENST00000562602 HECW1Q76N89 1606 aa10.55□□□□□ -0.72
CFDP1-202ENST00000562602 C3orf67Q6ZVT6 689 aa10.54□□□□□ -0.72
CFDP1-202ENST00000562602 BOLA1Q9Y3E2 137 aa10.54□□□□□ -0.72
CFDP1-202ENST00000562602 UGGT2Q9NYU1 1516 aa10.53□□□□□ -0.72
CFDP1-202ENST00000562602 NAIPQ13075 1403 aa10.53□□□□□ -0.72
CFDP1-202ENST00000562602 VGFO15240 615 aaPredicted RBP10.53□□□□□ -0.72
CFDP1-202ENST00000562602 ANP32CO43423 234 aa10.53□□□□□ -0.72
CFDP1-202ENST00000562602 SIN3AQ96ST3 1273 aa10.53□□□□□ -0.72
CFDP1-202ENST00000562602 TMEM121BQ9BXQ6 578 aaPredicted RBP10.53□□□□□ -0.72
CFDP1-202ENST00000562602 TARBP1Q13395 1621 aaKnown RBP10.53□□□□□ -0.72
CFDP1-202ENST00000562602 PTPN23Q9H3S7 1636 aa10.53□□□□□ -0.72
CFDP1-202ENST00000562602 PKD2Q13563 968 aa10.52□□□□□ -0.73
CFDP1-202ENST00000562602 WDR62O43379 1518 aa10.52□□□□□ -0.73
CFDP1-202ENST00000562602 IQGAP2Q13576 1575 aa10.52□□□□□ -0.73
CFDP1-202ENST00000562602 IFT140Q96RY7 1462 aa10.51□□□□□ -0.73
CFDP1-202ENST00000562602 MS4A4AQ96JQ5 239 aa10.51□□□□□ -0.73
CFDP1-202ENST00000562602 CDK11AQ9UQ88 783 aaPredicted RBP10.51□□□□□ -0.73
CFDP1-202ENST00000562602 ROCK1Q13464 1354 aa10.5□□□□□ -0.73
CFDP1-202ENST00000562602 SNPHO15079 494 aa10.49□□□□□ -0.73
CFDP1-202ENST00000562602 CDAN1Q8IWY9 1227 aa10.49□□□□□ -0.73
CFDP1-202ENST00000562602 EPRSP07814 1512 aaKnown RBP10.48□□□□□ -0.73
CFDP1-202ENST00000562602 ADAMTS12P58397 1594 aa10.48□□□□□ -0.73
CFDP1-202ENST00000562602 SOX12O15370 315 aa10.48□□□□□ -0.73
CFDP1-202ENST00000562602 DDX10Q13206 875 aaKnown RBP10.48□□□□□ -0.73
CFDP1-202ENST00000562602 SUPT16HQ9Y5B9 1047 aaKnown RBP10.48□□□□□ -0.73
CFDP1-202ENST00000562602 PHF8Q9UPP1 1060 aa10.47□□□□□ -0.73
CFDP1-202ENST00000562602 PTPRKQ15262 1439 aa10.47□□□□□ -0.73
CFDP1-202ENST00000562602 KIAA0586Q9BVV6 1533 aa10.47□□□□□ -0.73
CFDP1-202ENST00000562602 PBRM1Q86U86 1689 aa10.45□□□□□ -0.74
CFDP1-202ENST00000562602 NEFLP07196 543 aa10.45□□□□□ -0.74
CFDP1-202ENST00000562602 TMEM92Q6UXU6 159 aa10.45□□□□□ -0.74
CFDP1-202ENST00000562602 MARVELD3Q96A59 401 aa10.45□□□□□ -0.74
CFDP1-202ENST00000562602 ECM2O94769 699 aaPredicted RBP10.44□□□□□ -0.74
CFDP1-202ENST00000562602 HOXB3P14651 431 aaPredicted RBP10.44□□□□□ -0.74
CFDP1-202ENST00000562602 GCC2Q8IWJ2 1684 aa10.44□□□□□ -0.74
CFDP1-202ENST00000562602 RGL2O15211 777 aa10.43□□□□□ -0.74
CFDP1-202ENST00000562602 MICALL2Q8IY33 904 aa10.43□□□□□ -0.74
CFDP1-202ENST00000562602 BCL11BQ9C0K0 894 aaPredicted RBP10.43□□□□□ -0.74
CFDP1-202ENST00000562602 FBXO22Q8NEZ5 403 aa10.42□□□□□ -0.74
CFDP1-202ENST00000562602 POTEB3A0JP26 581 aa10.41□□□□□ -0.74
CFDP1-202ENST00000562602 EIF4G2P78344 907 aaKnown RBP eCLIP10.41□□□□□ -0.74
CFDP1-202ENST00000562602 POTEBQ6S5H4 581 aa10.41□□□□□ -0.74
CFDP1-202ENST00000562602 TRIM52Q96A61 297 aa10.41□□□□□ -0.74
CFDP1-202ENST00000562602 LRRIQ1Q96JM4 1722 aa10.41□□□□□ -0.74
CFDP1-202ENST00000562602 G3V3G9 751 aa10.4□□□□□ -0.74
CFDP1-202ENST00000562602 MPHOSPH9Q99550 1183 aa10.4□□□□□ -0.74
CFDP1-202ENST00000562602 MAGI3Q5TCQ9 1506 aa10.39□□□□□ -0.75
CFDP1-202ENST00000562602 MAGI1Q96QZ7 1491 aaPredicted RBP10.39□□□□□ -0.75
CFDP1-202ENST00000562602 STK24Q9Y6E0 443 aa10.39□□□□□ -0.75
CFDP1-202ENST00000562602 ERICH6BQ5W0A0 696 aa10.38□□□□□ -0.75
CFDP1-202ENST00000562602 MFRPQ9BY79 579 aa10.38□□□□□ -0.75
CFDP1-202ENST00000562602 RRP7BPQ9NSQ0 103 aa10.38□□□□□ -0.75
CFDP1-202ENST00000562602 DAPK1P53355 1430 aa10.38□□□□□ -0.75
CFDP1-202ENST00000562602 CARMIL2Q6F5E8 1435 aa10.38□□□□□ -0.75
CFDP1-202ENST00000562602 KIAA0556O60303 1618 aa10.37□□□□□ -0.75
CFDP1-202ENST00000562602 GRIN2AQ12879 1464 aa10.36□□□□□ -0.75
CFDP1-202ENST00000562602 TROQ12816 1431 aaPredicted RBP10.36□□□□□ -0.75
CFDP1-202ENST00000562602 DISP1Q96F81 1524 aa10.36□□□□□ -0.75
CFDP1-202ENST00000562602 KDM5BQ9UGL1 1544 aa10.35□□□□□ -0.75
CFDP1-202ENST00000562602 STK25O00506 426 aa10.35□□□□□ -0.75
CFDP1-202ENST00000562602 KCNH8Q96L42 1107 aa10.35□□□□□ -0.75
CFDP1-202ENST00000562602 CHIC2Q9UKJ5 165 aa10.35□□□□□ -0.75
CFDP1-202ENST00000562602 DNMT1P26358 1616 aaKnown RBP10.35□□□□□ -0.75
CFDP1-202ENST00000562602 RAPGEF6Q8TEU7 1601 aa10.35□□□□□ -0.75
CFDP1-202ENST00000562602 ANKRD30BQ9BXX2 1392 aa10.35□□□□□ -0.75
CFDP1-202ENST00000562602 RPRD2Q5VT52 1461 aaKnown RBP10.35□□□□□ -0.75
CFDP1-202ENST00000562602 ARID4BQ4LE39 1312 aaPredicted RBP10.34□□□□□ -0.75
CFDP1-202ENST00000562602 ABCC5O15440 1437 aa10.34□□□□□ -0.75
CFDP1-202ENST00000562602 CDK13Q14004 1512 aaKnown RBP10.34□□□□□ -0.75
CFDP1-202ENST00000562602 NLRP6P59044 892 aa10.34□□□□□ -0.75
CFDP1-202ENST00000562602 TAOK2Q9UL54 1235 aa10.34□□□□□ -0.75
CFDP1-202ENST00000562602 NUP153P49790 1475 aaKnown RBP10.34□□□□□ -0.75
CFDP1-202ENST00000562602 HSPA5P11021 654 aaKnown RBP10.33□□□□□ -0.76
CFDP1-202ENST00000562602 SYNJ2O15056 1496 aa10.33□□□□□ -0.76
CFDP1-202ENST00000562602 ADGRL2O95490 1459 aa10.32□□□□□ -0.76
CFDP1-202ENST00000562602 EMP3P54852 163 aa10.32□□□□□ -0.76
CFDP1-202ENST00000562602 CHMP7Q8WUX9 453 aaPredicted RBP10.32□□□□□ -0.76
CFDP1-202ENST00000562602 CNTLNQ9NXG0 1405 aa10.32□□□□□ -0.76
CFDP1-202ENST00000562602 ITSN2Q9NZM3 1697 aa10.31□□□□□ -0.76
CFDP1-202ENST00000562602 ANKRD30AQ9BXX3 1397 aa10.31□□□□□ -0.76
CFDP1-202ENST00000562602 L3MBTL2Q969R5 705 aa10.31□□□□□ -0.76
CFDP1-202ENST00000562602 CFDP1Q9UEE9 299 aaPredicted RBP10.31□□□□□ -0.76
CFDP1-202ENST00000562602 ZNF608Q9ULD9 1512 aaPredicted RBP10.31□□□□□ -0.76
CFDP1-202ENST00000562602 NCOA1Q15788 1441 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms