RNA–Protein interactions for RNA: ENST00000562576.5

CNEP1R1-204, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 5 BASIC

Gene CNEP1R1, Length 656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-204ENST00000562576 EFCAB2Q5VUJ9 269 aa11.8□□□□□ -0.52
CNEP1R1-204ENST00000562576 CD44P16070 742 aaKnown RBP11.79□□□□□ -0.52
CNEP1R1-204ENST00000562576 ABCA6Q8N139 1617 aa11.78□□□□□ -0.52
CNEP1R1-204ENST00000562576 ALKQ9UM73 1620 aa11.78□□□□□ -0.52
CNEP1R1-204ENST00000562576 ESF1Q9H501 851 aaKnown RBP11.78□□□□□ -0.52
CNEP1R1-204ENST00000562576 ZMYM3Q14202 1370 aa11.77□□□□□ -0.53
CNEP1R1-204ENST00000562576 KDM5CP41229 1560 aa11.75□□□□□ -0.53
CNEP1R1-204ENST00000562576 TOM1O60784 492 aa11.75□□□□□ -0.53
CNEP1R1-204ENST00000562576 POTEAQ6S8J7 498 aa11.75□□□□□ -0.53
CNEP1R1-204ENST00000562576 ATP1B4Q9UN42 357 aaPredicted RBP11.75□□□□□ -0.53
CNEP1R1-204ENST00000562576 TCOF1Q13428 1488 aaKnown RBP11.75□□□□□ -0.53
CNEP1R1-204ENST00000562576 KIF14Q15058 1648 aa11.75□□□□□ -0.53
CNEP1R1-204ENST00000562576 SPDYE4A6NLX3 237 aa11.74□□□□□ -0.53
CNEP1R1-204ENST00000562576 PKD2Q13563 968 aa11.74□□□□□ -0.53
CNEP1R1-204ENST00000562576 ZNF518AQ6AHZ1 1483 aa11.74□□□□□ -0.53
CNEP1R1-204ENST00000562576 REREQ9P2R6 1566 aa11.71□□□□□ -0.53
CNEP1R1-204ENST00000562576 AGLP35573 1532 aa11.71□□□□□ -0.53
CNEP1R1-204ENST00000562576 ARHGAP5Q13017 1502 aa11.7□□□□□ -0.54
CNEP1R1-204ENST00000562576 MLH3Q9UHC1 1453 aa11.7□□□□□ -0.54
CNEP1R1-204ENST00000562576 NPATQ14207 1427 aa11.7□□□□□ -0.54
CNEP1R1-204ENST00000562576 MYO5CQ9NQX4 1742 aa11.7□□□□□ -0.54
CNEP1R1-204ENST00000562576 PTPRKQ15262 1439 aa11.69□□□□□ -0.54
CNEP1R1-204ENST00000562576 MYO3AQ8NEV4 1616 aa11.69□□□□□ -0.54
CNEP1R1-204ENST00000562576 PLA2R1Q13018 1463 aa11.69□□□□□ -0.54
CNEP1R1-204ENST00000562576 SHANK2Q9UPX8 1470 aa11.69□□□□□ -0.54
CNEP1R1-204ENST00000562576 CNTLNQ9NXG0 1405 aa11.68□□□□□ -0.54
CNEP1R1-204ENST00000562576 CEP170BQ9Y4F5 1589 aaPredicted RBP11.67□□□□□ -0.54
CNEP1R1-204ENST00000562576 KIDINS220Q9ULH0 1771 aa11.67□□□□□ -0.54
CNEP1R1-204ENST00000562576 CLTCQ00610 1675 aaKnown RBP11.66□□□□□ -0.54
CNEP1R1-204ENST00000562576 FBXO31Q5XUX0 539 aaPredicted RBP11.66□□□□□ -0.54
CNEP1R1-204ENST00000562576 CREBZFQ9NS37 354 aa11.66□□□□□ -0.54
CNEP1R1-204ENST00000562576 NEURL4Q96JN8 1562 aa11.66□□□□□ -0.54
CNEP1R1-204ENST00000562576 LHX8Q68G74 356 aa11.65□□□□□ -0.54
CNEP1R1-204ENST00000562576 GGT6Q6P531 493 aa11.65□□□□□ -0.54
CNEP1R1-204ENST00000562576 VWDEQ8N2E2 1590 aa11.65□□□□□ -0.54
CNEP1R1-204ENST00000562576 SUPT6HQ7KZ85 1726 aaKnown RBP11.65□□□□□ -0.54
CNEP1R1-204ENST00000562576 CDC42BPBQ9Y5S2 1711 aa11.65□□□□□ -0.54
CNEP1R1-204ENST00000562576 ZNF142P52746 1687 aaPredicted RBP11.64□□□□□ -0.55
CNEP1R1-204ENST00000562576 DNMT1P26358 1616 aaKnown RBP11.64□□□□□ -0.55
CNEP1R1-204ENST00000562576 SETD1AO15047 1707 aaKnown RBP11.63□□□□□ -0.55
CNEP1R1-204ENST00000562576 HNRNPMP52272 730 aaKnown RBP eCLIP11.63□□□□□ -0.55
CNEP1R1-204ENST00000562576 CPS1P31327 1500 aa11.63□□□□□ -0.55
CNEP1R1-204ENST00000562576 MROH2AA6NES4 1674 aa11.62□□□□□ -0.55
CNEP1R1-204ENST00000562576 ZNF579Q8NAF0 562 aaKnown RBP11.62□□□□□ -0.55
CNEP1R1-204ENST00000562576 STRCP1A6NGW2 1772 aa11.62□□□□□ -0.55
CNEP1R1-204ENST00000562576 TROQ12816 1431 aaPredicted RBP11.61□□□□□ -0.55
CNEP1R1-204ENST00000562576 ABCC1P33527 1531 aa11.61□□□□□ -0.55
CNEP1R1-204ENST00000562576 ZNF777Q9ULD5 760 aaPredicted RBP11.61□□□□□ -0.55
CNEP1R1-204ENST00000562576 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.61□□□□□ -0.55
CNEP1R1-204ENST00000562576 ITSN2Q9NZM3 1697 aa11.6□□□□□ -0.55
CNEP1R1-204ENST00000562576 A2ML1A8K2U0 1454 aa11.6□□□□□ -0.55
CNEP1R1-204ENST00000562576 ZRANB1Q9UGI0 708 aa11.6□□□□□ -0.55
CNEP1R1-204ENST00000562576 LRRC7Q96NW7 1537 aa11.59□□□□□ -0.55
CNEP1R1-204ENST00000562576 SAMD9LQ8IVG5 1584 aa11.58□□□□□ -0.55
CNEP1R1-204ENST00000562576 LRRIQ1Q96JM4 1722 aa11.58□□□□□ -0.56
CNEP1R1-204ENST00000562576 PAK3O75914 559 aaPredicted RBP11.58□□□□□ -0.56
CNEP1R1-204ENST00000562576 DCBLD2Q96PD2 775 aa11.58□□□□□ -0.56
CNEP1R1-204ENST00000562576 SPAG9O60271 1321 aaKnown RBP11.58□□□□□ -0.56
CNEP1R1-204ENST00000562576 SRCAPQ6ZRS2 3230 aa11.58□□□□□ -0.56
CNEP1R1-204ENST00000562576 ANKLE2Q86XL3 938 aa11.56□□□□□ -0.56
CNEP1R1-204ENST00000562576 UPF1Q92900 1129 aaKnown RBP eCLIP11.56□□□□□ -0.56
CNEP1R1-204ENST00000562576 CDK11AQ9UQ88 783 aaPredicted RBP11.56□□□□□ -0.56
CNEP1R1-204ENST00000562576 POLR1AO95602 1720 aaPredicted RBP11.55□□□□□ -0.56
CNEP1R1-204ENST00000562576 NPHP4O75161 1426 aaPredicted RBP11.55□□□□□ -0.56
CNEP1R1-204ENST00000562576 POTEIP0CG38 1075 aa11.55□□□□□ -0.56
CNEP1R1-204ENST00000562576 PREX2Q70Z35 1606 aa11.54□□□□□ -0.56
CNEP1R1-204ENST00000562576 A2MP01023 1474 aa11.54□□□□□ -0.56
CNEP1R1-204ENST00000562576 TNRQ92752 1358 aa11.53□□□□□ -0.56
CNEP1R1-204ENST00000562576 SYCP2Q9BX26 1530 aa11.52□□□□□ -0.57
CNEP1R1-204ENST00000562576 RBM33Q96EV2 1170 aaKnown RBP11.52□□□□□ -0.57
CNEP1R1-204ENST00000562576 PLXNC1O60486 1568 aa11.52□□□□□ -0.57
CNEP1R1-204ENST00000562576 ARHGAP35Q9NRY4 1499 aa11.51□□□□□ -0.57
CNEP1R1-204ENST00000562576 CLIP1P30622 1438 aa11.51□□□□□ -0.57
CNEP1R1-204ENST00000562576 CDC42BPAQ5VT25 1732 aa11.5□□□□□ -0.57
CNEP1R1-204ENST00000562576 TRIM52Q96A61 297 aa11.5□□□□□ -0.57
CNEP1R1-204ENST00000562576 ZNF644Q9H582 1327 aaPredicted RBP11.5□□□□□ -0.57
CNEP1R1-204ENST00000562576 ATP7AQ04656 1500 aa11.5□□□□□ -0.57
CNEP1R1-204ENST00000562576 THEMISQ8N1K5 641 aaPredicted RBP11.49□□□□□ -0.57
CNEP1R1-204ENST00000562576 MED14O60244 1454 aa11.49□□□□□ -0.57
CNEP1R1-204ENST00000562576 RNF17Q9BXT8 1623 aaKnown RBP11.48□□□□□ -0.57
CNEP1R1-204ENST00000562576 XIRP1Q702N8 1843 aaKnown RBP11.47□□□□□ -0.57
CNEP1R1-204ENST00000562576 GPATCH8Q9UKJ3 1502 aaKnown RBP11.47□□□□□ -0.57
CNEP1R1-204ENST00000562576 FMN1Q68DA7 1419 aa11.47□□□□□ -0.57
CNEP1R1-204ENST00000562576 INO80Q9ULG1 1556 aaPredicted RBP11.46□□□□□ -0.57
CNEP1R1-204ENST00000562576 MIA2Q96PC5 1412 aa11.46□□□□□ -0.57
CNEP1R1-204ENST00000562576 LTKP29376 864 aa11.46□□□□□ -0.57
CNEP1R1-204ENST00000562576 IQGAP1P46940 1657 aa11.46□□□□□ -0.58
CNEP1R1-204ENST00000562576 KIF3BO15066 747 aa11.45□□□□□ -0.58
CNEP1R1-204ENST00000562576 UBTFP17480 764 aaKnown RBP11.45□□□□□ -0.58
CNEP1R1-204ENST00000562576 MNX1P50219 401 aaPredicted RBP11.44□□□□□ -0.58
CNEP1R1-204ENST00000562576 DEPDC5O75140 1603 aa11.44□□□□□ -0.58
CNEP1R1-204ENST00000562576 UGGT1Q9NYU2 1555 aa11.44□□□□□ -0.58
CNEP1R1-204ENST00000562576 FAM135BQ49AJ0 1406 aa11.43□□□□□ -0.58
CNEP1R1-204ENST00000562576 PROM2Q8N271 834 aa11.43□□□□□ -0.58
CNEP1R1-204ENST00000562576 PZPP20742 1482 aa11.43□□□□□ -0.58
CNEP1R1-204ENST00000562576 GALR2O43603 387 aaPredicted RBP11.42□□□□□ -0.58
CNEP1R1-204ENST00000562576 CFDP1Q9UEE9 299 aaPredicted RBP11.42□□□□□ -0.58
CNEP1R1-204ENST00000562576 WASHC2CQ9Y4E1 1318 aa11.41□□□□□ -0.58
CNEP1R1-204ENST00000562576 FAM135AQ9P2D6 1515 aa11.41□□□□□ -0.58
CNEP1R1-204ENST00000562576 ZC3H13Q5T200 1668 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms