RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 PTPRKQ15262 1439 aa27.57■■■□□ 2
CMTM3-204ENST00000562357 DMRT2Q9Y5R5 561 aa27.56■■■□□ 2
CMTM3-204ENST00000562357 DUOX2Q9NRD8 1548 aa27.56■■■□□ 2
CMTM3-204ENST00000562357 CROCC2H7BZ55 1655 aa27.54■■■□□ 2
CMTM3-204ENST00000562357 DNMT1P26358 1616 aaKnown RBP27.54■■■□□ 2
CMTM3-204ENST00000562357 KIF15Q9NS87 1388 aa27.54■■■□□ 2
CMTM3-204ENST00000562357 EIF2AK4Q9P2K8 1649 aaKnown RBP27.53■■■□□ 2
CMTM3-204ENST00000562357 FAM50AQ14320 339 aaKnown RBP27.53■■■□□ 2
CMTM3-204ENST00000562357 RRP7BPQ9NSQ0 103 aa27.51■■□□□ 1.99
CMTM3-204ENST00000562357 ANKRD30AQ9BXX3 1397 aa27.49■■□□□ 1.99
CMTM3-204ENST00000562357 RNF17Q9BXT8 1623 aaKnown RBP27.49■■□□□ 1.99
CMTM3-204ENST00000562357 PZPP20742 1482 aa27.48■■□□□ 1.99
CMTM3-204ENST00000562357 ERBINQ96RT1 1412 aa27.48■■□□□ 1.99
CMTM3-204ENST00000562357 MYO3AQ8NEV4 1616 aa27.48■■□□□ 1.99
CMTM3-204ENST00000562357 CHIC2Q9UKJ5 165 aa27.46■■□□□ 1.99
CMTM3-204ENST00000562357 TNRQ92752 1358 aa27.45■■□□□ 1.98
CMTM3-204ENST00000562357 CEP170BQ9Y4F5 1589 aaPredicted RBP27.44■■□□□ 1.98
CMTM3-204ENST00000562357 ZC3H13Q5T200 1668 aaKnown RBP27.44■■□□□ 1.98
CMTM3-204ENST00000562357 NCOA1Q15788 1441 aa27.43■■□□□ 1.98
CMTM3-204ENST00000562357 ABCC3O15438 1527 aa27.42■■□□□ 1.98
CMTM3-204ENST00000562357 CAMSAP1Q5T5Y3 1602 aa27.42■■□□□ 1.98
CMTM3-204ENST00000562357 FBXO31Q5XUX0 539 aaPredicted RBP27.42■■□□□ 1.98
CMTM3-204ENST00000562357 ZNF142P52746 1687 aaPredicted RBP27.42■■□□□ 1.98
CMTM3-204ENST00000562357 STRCQ7RTU9 1775 aa27.41■■□□□ 1.98
CMTM3-204ENST00000562357 PTPRTO14522 1441 aa27.4■■□□□ 1.98
CMTM3-204ENST00000562357 A2ML1A8K2U0 1454 aa27.39■■□□□ 1.98
CMTM3-204ENST00000562357 KANK1Q14678 1352 aa27.38■■□□□ 1.97
CMTM3-204ENST00000562357 MROH1Q8NDA8 1641 aa27.37■■□□□ 1.97
CMTM3-204ENST00000562357 PLA2R1Q13018 1463 aa27.37■■□□□ 1.97
CMTM3-204ENST00000562357 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.36■■□□□ 1.97
CMTM3-204ENST00000562357 ADGRL2O95490 1459 aa27.36■■□□□ 1.97
CMTM3-204ENST00000562357 PRDM15P57071 1507 aaPredicted RBP27.36■■□□□ 1.97
CMTM3-204ENST00000562357 FBXO41Q8TF61 875 aa27.35■■□□□ 1.97
CMTM3-204ENST00000562357 PKD2Q13563 968 aa27.34■■□□□ 1.97
CMTM3-204ENST00000562357 NLRP1Q9C000 1473 aa27.33■■□□□ 1.97
CMTM3-204ENST00000562357 PPARGC1BQ86YN6 1023 aaKnown RBP27.33■■□□□ 1.97
CMTM3-204ENST00000562357 NCKAP5LQ9HCH0 1330 aa27.31■■□□□ 1.96
CMTM3-204ENST00000562357 CERKQ8TCT0 537 aa27.3■■□□□ 1.96
CMTM3-204ENST00000562357 CEP152O94986 1710 aa27.3■■□□□ 1.96
CMTM3-204ENST00000562357 DEPDC5O75140 1603 aa27.28■■□□□ 1.96
CMTM3-204ENST00000562357 ERVK-7P63135 1459 aa27.28■■□□□ 1.96
CMTM3-204ENST00000562357 SPATA31D1Q6ZQQ2 1576 aa27.27■■□□□ 1.96
CMTM3-204ENST00000562357 THEMISQ8N1K5 641 aaPredicted RBP27.27■■□□□ 1.96
CMTM3-204ENST00000562357 ANKRD50Q9ULJ7 1429 aa27.26■■□□□ 1.95
CMTM3-204ENST00000562357 ARHGAP31Q2M1Z3 1444 aa27.25■■□□□ 1.95
CMTM3-204ENST00000562357 UGGT1Q9NYU2 1555 aa27.25■■□□□ 1.95
CMTM3-204ENST00000562357 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.23■■□□□ 1.95
CMTM3-204ENST00000562357 ROCK1Q13464 1354 aa27.22■■□□□ 1.95
CMTM3-204ENST00000562357 ITGAEP38570 1179 aa27.21■■□□□ 1.95
CMTM3-204ENST00000562357 ANKLE2Q86XL3 938 aa27.2■■□□□ 1.94
CMTM3-204ENST00000562357 LMTK2Q8IWU2 1503 aa27.19■■□□□ 1.94
CMTM3-204ENST00000562357 VWDEQ8N2E2 1590 aa27.16■■□□□ 1.94
CMTM3-204ENST00000562357 POLR1AO95602 1720 aaPredicted RBP27.13■■□□□ 1.93
CMTM3-204ENST00000562357 CFAP65Q6ZU64 1925 aaKnown RBP27.12■■□□□ 1.93
CMTM3-204ENST00000562357 EFCAB6Q5THR3 1501 aa27.11■■□□□ 1.93
CMTM3-204ENST00000562357 STAG3Q9UJ98 1225 aa27.11■■□□□ 1.93
CMTM3-204ENST00000562357 LTBP4Q8N2S1 1624 aa27.1■■□□□ 1.93
CMTM3-204ENST00000562357 ZNF335Q9H4Z2 1342 aaPredicted RBP27.1■■□□□ 1.93
CMTM3-204ENST00000562357 RRBP1Q9P2E9 1410 aaKnown RBP27.09■■□□□ 1.93
CMTM3-204ENST00000562357 NEURL4Q96JN8 1562 aa27.07■■□□□ 1.92
CMTM3-204ENST00000562357 NPHP4O75161 1426 aaPredicted RBP27.07■■□□□ 1.92
CMTM3-204ENST00000562357 RPRD2Q5VT52 1461 aaKnown RBP27.06■■□□□ 1.92
CMTM3-204ENST00000562357 IQSEC2Q5JU85 1478 aa27.06■■□□□ 1.92
CMTM3-204ENST00000562357 UNC13BO14795 1591 aa27.05■■□□□ 1.92
CMTM3-204ENST00000562357 MED14O60244 1454 aa27.04■■□□□ 1.92
CMTM3-204ENST00000562357 UBR1Q8IWV7 1749 aa27.04■■□□□ 1.92
CMTM3-204ENST00000562357 EID1Q9Y6B2 187 aa27.03■■□□□ 1.92
CMTM3-204ENST00000562357 NOS1P29475 1434 aa27.02■■□□□ 1.92
CMTM3-204ENST00000562357 TET3O43151 1660 aa27.01■■□□□ 1.92
CMTM3-204ENST00000562357 SLC52A1Q9NWF4 448 aa27.01■■□□□ 1.91
CMTM3-204ENST00000562357 SCAF11Q99590 1463 aaKnown RBP27■■□□□ 1.91
CMTM3-204ENST00000562357 IDI1Q13907 227 aa27■■□□□ 1.91
CMTM3-204ENST00000562357 NUP155O75694 1391 aa26.99■■□□□ 1.91
CMTM3-204ENST00000562357 PIK3C2BO00750 1634 aa26.99■■□□□ 1.91
CMTM3-204ENST00000562357 TXNDC2Q86VQ3 553 aa26.99■■□□□ 1.91
CMTM3-204ENST00000562357 SLIT1O75093 1534 aa26.98■■□□□ 1.91
CMTM3-204ENST00000562357 IQGAP1P46940 1657 aa26.98■■□□□ 1.91
CMTM3-204ENST00000562357 SYNMO15061 1565 aa26.97■■□□□ 1.91
CMTM3-204ENST00000562357 GCC2Q8IWJ2 1684 aa26.96■■□□□ 1.91
CMTM3-204ENST00000562357 ARHGAP23Q9P227 1491 aa26.96■■□□□ 1.91
CMTM3-204ENST00000562357 TMEM2Q9UHN6 1383 aa26.96■■□□□ 1.91
CMTM3-204ENST00000562357 CPS1P31327 1500 aa26.95■■□□□ 1.9
CMTM3-204ENST00000562357 IQGAP3Q86VI3 1631 aa26.94■■□□□ 1.9
CMTM3-204ENST00000562357 KDM5AP29375 1690 aaKnown RBP26.94■■□□□ 1.9
CMTM3-204ENST00000562357 ADGRB3O60242 1522 aa26.92■■□□□ 1.9
CMTM3-204ENST00000562357 LTKP29376 864 aa26.91■■□□□ 1.9
CMTM3-204ENST00000562357 UBAP1LF5GYI3 381 aa26.87■■□□□ 1.89
CMTM3-204ENST00000562357 NAIPQ13075 1403 aa26.86■■□□□ 1.89
CMTM3-204ENST00000562357 E9PCH4 1651 aa26.85■■□□□ 1.89
CMTM3-204ENST00000562357 CHGAP10645 457 aaKnown RBP26.85■■□□□ 1.89
CMTM3-204ENST00000562357 HDGFP51858 240 aaKnown RBP26.85■■□□□ 1.89
CMTM3-204ENST00000562357 HFM1A2PYH4 1435 aa26.83■■□□□ 1.89
CMTM3-204ENST00000562357 BCANQ96GW7 911 aa26.82■■□□□ 1.88
CMTM3-204ENST00000562357 PPP1R15AO75807 674 aaPredicted RBP26.81■■□□□ 1.88
CMTM3-204ENST00000562357 TOM1O60784 492 aa26.78■■□□□ 1.88
CMTM3-204ENST00000562357 TRIM52Q96A61 297 aa26.78■■□□□ 1.88
CMTM3-204ENST00000562357 RIMS2Q9UQ26 1411 aa26.76■■□□□ 1.87
CMTM3-204ENST00000562357 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.76■■□□□ 1.87
CMTM3-204ENST00000562357 TMEM131LA2VDJ0 1609 aa26.76■■□□□ 1.87
CMTM3-204ENST00000562357 SCAF1Q9H7N4 1312 aaKnown RBP26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms