RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 ZDHHC16Q969W1 377 aa6.41□□□□□ -1.38
CHD9-204ENST00000561869 KCNH8Q96L42 1107 aa6.41□□□□□ -1.38
CHD9-204ENST00000561869 SPDYE16A6NNV3 312 aaPredicted RBP6.4□□□□□ -1.38
CHD9-204ENST00000561869 PCDHGA10Q9Y5H3 936 aa6.4□□□□□ -1.38
CHD9-204ENST00000561869 PTPN5P54829 565 aa6.39□□□□□ -1.39
CHD9-204ENST00000561869 STAC3Q96MF2 364 aa6.39□□□□□ -1.39
CHD9-204ENST00000561869 PHF14O94880 888 aa6.38□□□□□ -1.39
CHD9-204ENST00000561869 COL9A1P20849 921 aa6.38□□□□□ -1.39
CHD9-204ENST00000561869 ARHGEF1Q92888 912 aaKnown RBP6.38□□□□□ -1.39
CHD9-204ENST00000561869 PROX2Q3B8N5 592 aa6.37□□□□□ -1.39
CHD9-204ENST00000561869 THSD4Q6ZMP0 1018 aa6.37□□□□□ -1.39
CHD9-204ENST00000561869 VSIG10Q8N0Z9 540 aa6.37□□□□□ -1.39
CHD9-204ENST00000561869 TYW1BQ6NUM6 668 aa6.36□□□□□ -1.39
CHD9-204ENST00000561869 DDX12PQ92771 950 aa6.36□□□□□ -1.39
CHD9-204ENST00000561869 PPP1R3GB7ZBB8 358 aa6.35□□□□□ -1.39
CHD9-204ENST00000561869 PRIM1P49642 420 aaKnown RBP6.35□□□□□ -1.39
CHD9-204ENST00000561869 MRPL50Q8N5N7 158 aaKnown RBP6.35□□□□□ -1.39
CHD9-204ENST00000561869 WNT2BQ93097 391 aa6.35□□□□□ -1.39
CHD9-204ENST00000561869 EPAS1Q99814 870 aa6.35□□□□□ -1.39
CHD9-204ENST00000561869 FBXW7Q969H0 707 aa6.34□□□□□ -1.39
CHD9-204ENST00000561869 P3H3Q8IVL6 736 aa6.33□□□□□ -1.4
CHD9-204ENST00000561869 GOLGA8CPA6NN73 597 aa6.32□□□□□ -1.4
CHD9-204ENST00000561869 OSBPP22059 807 aa6.32□□□□□ -1.4
CHD9-204ENST00000561869 GRXCR2A6NFK2 248 aa6.31□□□□□ -1.4
CHD9-204ENST00000561869 MLLT3P42568 568 aaPredicted RBP6.31□□□□□ -1.4
CHD9-204ENST00000561869 EN1Q05925 392 aaPredicted RBP6.31□□□□□ -1.4
CHD9-204ENST00000561869 NBR1Q14596 966 aa6.31□□□□□ -1.4
CHD9-204ENST00000561869 C6orf132Q5T0Z8 1188 aa6.31□□□□□ -1.4
CHD9-204ENST00000561869 NBPF3Q9H094 633 aa6.31□□□□□ -1.4
CHD9-204ENST00000561869 RABGEF1Q9UJ41 708 aa6.31□□□□□ -1.4
CHD9-204ENST00000561869 RBM33Q96EV2 1170 aaKnown RBP6.3□□□□□ -1.4
CHD9-204ENST00000561869 SEMA3EO15041 775 aa6.29□□□□□ -1.4
CHD9-204ENST00000561869 BCAMP50895 628 aa6.29□□□□□ -1.4
CHD9-204ENST00000561869 TSR1Q2NL82 804 aaKnown RBP6.29□□□□□ -1.4
CHD9-204ENST00000561869 KIAA1468Q9P260 1216 aa6.29□□□□□ -1.4
CHD9-204ENST00000561869 IFFO2Q5TF58 517 aa6.28□□□□□ -1.4
CHD9-204ENST00000561869 SEPT9Q9UHD8 586 aaPredicted RBP6.28□□□□□ -1.4
CHD9-204ENST00000561869 ANKK1Q8NFD2 765 aa6.27□□□□□ -1.41
CHD9-204ENST00000561869 A0A0G2JS52 829 aa6.26□□□□□ -1.41
CHD9-204ENST00000561869 TESPA1A2RU30 521 aaPredicted RBP6.26□□□□□ -1.41
CHD9-204ENST00000561869 MAP3K7O43318 606 aa6.26□□□□□ -1.41
CHD9-204ENST00000561869 SOWAHBA6NEL2 793 aa6.25□□□□□ -1.41
CHD9-204ENST00000561869 TRIM6-TRIM34B2RNG4 842 aa6.25□□□□□ -1.41
CHD9-204ENST00000561869 LAPTM4BQ86VI4 370 aa6.25□□□□□ -1.41
CHD9-204ENST00000561869 ZFRQ96KR1 1074 aaKnown RBP6.25□□□□□ -1.41
CHD9-204ENST00000561869 CDHR5Q9HBB8 845 aa6.25□□□□□ -1.41
CHD9-204ENST00000561869 ONECUT3O60422 494 aaPredicted RBP6.24□□□□□ -1.41
CHD9-204ENST00000561869 NPDC1Q9NQX5 325 aaPredicted RBP6.24□□□□□ -1.41
CHD9-204ENST00000561869 WBP1LQ9NX94 342 aa6.24□□□□□ -1.41
CHD9-204ENST00000561869 TSKSQ9UJT2 592 aa6.23□□□□□ -1.41
CHD9-204ENST00000561869 C3orf80F5H4A9 247 aa6.22□□□□□ -1.41
CHD9-204ENST00000561869 ITGBL1O95965 494 aaPredicted RBP6.22□□□□□ -1.41
CHD9-204ENST00000561869 FAM198AQ9UFP1 575 aa6.22□□□□□ -1.41
CHD9-204ENST00000561869 FAM98CQ17RN3 349 aaKnown RBP6.21□□□□□ -1.42
CHD9-204ENST00000561869 TTC13Q8NBP0 860 aa6.21□□□□□ -1.42
CHD9-204ENST00000561869 RGS20O76081 388 aa6.2□□□□□ -1.42
CHD9-204ENST00000561869 PRSS12P56730 875 aa6.2□□□□□ -1.42
CHD9-204ENST00000561869 RBM26Q5T8P6 1007 aaKnown RBP6.2□□□□□ -1.42
CHD9-204ENST00000561869 CERKQ8TCT0 537 aa6.2□□□□□ -1.42
CHD9-204ENST00000561869 CDCA7LQ96GN5 454 aa6.2□□□□□ -1.42
CHD9-204ENST00000561869 SMAPO00193 183 aa6.19□□□□□ -1.42
CHD9-204ENST00000561869 PTGDRQ13258 359 aa6.18□□□□□ -1.42
CHD9-204ENST00000561869 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.18□□□□□ -1.42
CHD9-204ENST00000561869 HPS5Q9UPZ3 1129 aa6.18□□□□□ -1.42
CHD9-204ENST00000561869 GPR37O15354 613 aa6.17□□□□□ -1.42
CHD9-204ENST00000561869 SMYD5Q6GMV2 418 aa6.17□□□□□ -1.42
CHD9-204ENST00000561869 LRCH3Q96II8 777 aa6.17□□□□□ -1.42
CHD9-204ENST00000561869 RBM27Q9P2N5 1060 aaKnown RBP6.17□□□□□ -1.42
CHD9-204ENST00000561869 TSR3Q9UJK0 312 aaKnown RBP6.17□□□□□ -1.42
CHD9-204ENST00000561869 NUTM2FA1L443 756 aa6.16□□□□□ -1.42
CHD9-204ENST00000561869 PADI6Q6TGC4 694 aa6.16□□□□□ -1.42
CHD9-204ENST00000561869 NYAP1Q6ZVC0 841 aa6.16□□□□□ -1.42
CHD9-204ENST00000561869 PACS2Q86VP3 889 aa6.16□□□□□ -1.42
CHD9-204ENST00000561869 SAMD7Q7Z3H4 446 aa6.15□□□□□ -1.42
CHD9-204ENST00000561869 TATDN2Q93075 761 aa6.15□□□□□ -1.42
CHD9-204ENST00000561869 IRX2Q9BZI1 471 aaPredicted RBP6.15□□□□□ -1.42
CHD9-204ENST00000561869 SLC24A1O60721 1099 aa6.14□□□□□ -1.43
CHD9-204ENST00000561869 KCNC4Q03721 635 aa6.14□□□□□ -1.43
CHD9-204ENST00000561869 FCHSD2O94868 740 aa6.13□□□□□ -1.43
CHD9-204ENST00000561869 TJAP1Q5JTD0 557 aa6.12□□□□□ -1.43
CHD9-204ENST00000561869 NUDT18Q6ZVK8 323 aa6.12□□□□□ -1.43
CHD9-204ENST00000561869 EYA1Q99502 592 aa6.12□□□□□ -1.43
CHD9-204ENST00000561869 PNMA3Q9UL41 463 aa6.12□□□□□ -1.43
CHD9-204ENST00000561869 NBPF26B4DH59 902 aa6.11□□□□□ -1.43
CHD9-204ENST00000561869 FECHP22830 423 aa6.11□□□□□ -1.43
CHD9-204ENST00000561869 PPP4CP60510 307 aa6.11□□□□□ -1.43
CHD9-204ENST00000561869 HIC1Q14526 733 aa6.11□□□□□ -1.43
CHD9-204ENST00000561869 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.11□□□□□ -1.43
CHD9-204ENST00000561869 ADGRG1Q9Y653 693 aa6.11□□□□□ -1.43
CHD9-204ENST00000561869 GNPATO15228 680 aa6.09□□□□□ -1.43
CHD9-204ENST00000561869 FAM161AQ3B820 660 aa6.09□□□□□ -1.43
CHD9-204ENST00000561869 GPIHBP1Q8IV16 184 aa6.09□□□□□ -1.43
CHD9-204ENST00000561869 MTRQ99707 1265 aa6.09□□□□□ -1.43
CHD9-204ENST00000561869 APLP1P51693 650 aa6.08□□□□□ -1.44
CHD9-204ENST00000561869 ZNF516Q92618 1163 aa6.08□□□□□ -1.44
CHD9-204ENST00000561869 LCE2BO14633 110 aa6.06□□□□□ -1.44
CHD9-204ENST00000561869 RNF40O75150 1001 aa6.06□□□□□ -1.44
CHD9-204ENST00000561869 SWT1Q5T5J6 900 aaKnown RBP6.06□□□□□ -1.44
CHD9-204ENST00000561869 LMOD2Q6P5Q4 547 aa6.06□□□□□ -1.44
CHD9-204ENST00000561869 TULP1O00294 542 aaPredicted RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms