RNA–Protein interactions for RNA: ENST00000561816.1

LINC01616-201, Transcript of long intergenic non-protein coding RNA 1616, humanhuman

BASIC

Gene LINC01616, Length 2,280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01616-201ENST00000561816 SNRKQ9NRH2 765 aa10.26□□□□□ -0.77
LINC01616-201ENST00000561816 CCDC88BA6NC98 1476 aa10.25□□□□□ -0.77
LINC01616-201ENST00000561816 POLR3EQ9NVU0 708 aa10.25□□□□□ -0.77
LINC01616-201ENST00000561816 SH3D19Q5HYK7 790 aa10.24□□□□□ -0.77
LINC01616-201ENST00000561816 DDX12PQ92771 950 aa10.24□□□□□ -0.77
LINC01616-201ENST00000561816 SPDYE16A6NNV3 312 aaPredicted RBP10.22□□□□□ -0.77
LINC01616-201ENST00000561816 HIC1Q14526 733 aa10.22□□□□□ -0.77
LINC01616-201ENST00000561816 PCGF6Q9BYE7 350 aa10.21□□□□□ -0.77
LINC01616-201ENST00000561816 DPY19L2Q6NUT2 758 aa10.21□□□□□ -0.78
LINC01616-201ENST00000561816 FBXW7Q969H0 707 aa10.19□□□□□ -0.78
LINC01616-201ENST00000561816 POM121CA8CG34 1229 aa10.19□□□□□ -0.78
LINC01616-201ENST00000561816 PTGDRQ13258 359 aa10.18□□□□□ -0.78
LINC01616-201ENST00000561816 ZNF330Q9Y3S2 320 aaPredicted RBP10.18□□□□□ -0.78
LINC01616-201ENST00000561816 MDM2Q00987 491 aaPredicted RBP10.18□□□□□ -0.78
LINC01616-201ENST00000561816 TMUB1Q9BVT8 246 aa10.18□□□□□ -0.78
LINC01616-201ENST00000561816 FAM161AQ3B820 660 aa10.17□□□□□ -0.78
LINC01616-201ENST00000561816 UPF1Q92900 1129 aaKnown RBP eCLIP10.17□□□□□ -0.78
LINC01616-201ENST00000561816 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.16□□□□□ -0.78
LINC01616-201ENST00000561816 CDHR5Q9HBB8 845 aa10.16□□□□□ -0.78
LINC01616-201ENST00000561816 GDPD2Q9HCC8 539 aa10.16□□□□□ -0.78
LINC01616-201ENST00000561816 FCHSD2O94868 740 aa10.16□□□□□ -0.78
LINC01616-201ENST00000561816 ATAD2BQ9ULI0 1458 aa10.14□□□□□ -0.79
LINC01616-201ENST00000561816 SKIV2LQ15477 1246 aaKnown RBP10.14□□□□□ -0.79
LINC01616-201ENST00000561816 RBM42Q9BTD8 480 aaKnown RBP10.14□□□□□ -0.79
LINC01616-201ENST00000561816 BEGAINQ9BUH8 593 aa10.14□□□□□ -0.79
LINC01616-201ENST00000561816 TMEM106CQ9BVX2 250 aa10.14□□□□□ -0.79
LINC01616-201ENST00000561816 ATP1B4Q9UN42 357 aaPredicted RBP10.14□□□□□ -0.79
LINC01616-201ENST00000561816 FOXK1P85037 733 aa10.13□□□□□ -0.79
LINC01616-201ENST00000561816 PLPP6Q8IY26 295 aa10.13□□□□□ -0.79
LINC01616-201ENST00000561816 FAM9AQ8IZU1 332 aaPredicted RBP10.13□□□□□ -0.79
LINC01616-201ENST00000561816 PHF12Q96QT6 1004 aa10.13□□□□□ -0.79
LINC01616-201ENST00000561816 ABCC8Q09428 1581 aa10.11□□□□□ -0.79
LINC01616-201ENST00000561816 SSTR3P32745 418 aaPredicted RBP10.11□□□□□ -0.79
LINC01616-201ENST00000561816 MYSM1Q5VVJ2 828 aa10.11□□□□□ -0.79
LINC01616-201ENST00000561816 MTMR14Q8NCE2 650 aa10.11□□□□□ -0.79
LINC01616-201ENST00000561816 EEA1Q15075 1411 aa10.11□□□□□ -0.79
LINC01616-201ENST00000561816 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.1□□□□□ -0.79
LINC01616-201ENST00000561816 SPDYE5A6NIY4 337 aa10.1□□□□□ -0.79
LINC01616-201ENST00000561816 GLMNQ92990 594 aa10.09□□□□□ -0.79
LINC01616-201ENST00000561816 C2orf72A6NCS6 295 aa10.09□□□□□ -0.79
LINC01616-201ENST00000561816 PRKAR2AP13861 404 aaKnown RBP10.09□□□□□ -0.79
LINC01616-201ENST00000561816 GOLGA2Q08379 1002 aa10.09□□□□□ -0.79
LINC01616-201ENST00000561816 NPDC1Q9NQX5 325 aaPredicted RBP10.09□□□□□ -0.79
LINC01616-201ENST00000561816 BAZ1BQ9UIG0 1483 aaKnown RBP10.08□□□□□ -0.8
LINC01616-201ENST00000561816 RFC5P40937 340 aa10.08□□□□□ -0.8
LINC01616-201ENST00000561816 MAP3K9P80192 1104 aa10.08□□□□□ -0.8
LINC01616-201ENST00000561816 ILDR1Q86SU0 546 aaPredicted RBP10.08□□□□□ -0.8
LINC01616-201ENST00000561816 ADAMTS19Q8TE59 1207 aa10.08□□□□□ -0.8
LINC01616-201ENST00000561816 GPCPD1Q9NPB8 672 aa10.08□□□□□ -0.8
LINC01616-201ENST00000561816 RFX1P22670 979 aa10.07□□□□□ -0.8
LINC01616-201ENST00000561816 MICALL2Q8IY33 904 aa10.07□□□□□ -0.8
LINC01616-201ENST00000561816 CALR3Q96L12 384 aaKnown RBP10.07□□□□□ -0.8
LINC01616-201ENST00000561816 TBC1D12O60347 775 aa10.06□□□□□ -0.8
LINC01616-201ENST00000561816 E9PSI1 815 aa10.05□□□□□ -0.8
LINC01616-201ENST00000561816 LIMD1Q9UGP4 676 aa10.05□□□□□ -0.8
LINC01616-201ENST00000561816 TBC1D2BQ9UPU7 963 aa10.05□□□□□ -0.8
LINC01616-201ENST00000561816 WRNQ14191 1432 aaPredicted RBP eCLIP10.04□□□□□ -0.8
LINC01616-201ENST00000561816 UNCXA6NJT0 531 aa10.04□□□□□ -0.8
LINC01616-201ENST00000561816 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.04□□□□□ -0.8
LINC01616-201ENST00000561816 ABL2P42684 1182 aa10.03□□□□□ -0.8
LINC01616-201ENST00000561816 FAM217BQ9NTX9 383 aaPredicted RBP10.03□□□□□ -0.8
LINC01616-201ENST00000561816 CLCN1P35523 988 aa10.03□□□□□ -0.8
LINC01616-201ENST00000561816 TMC2Q8TDI7 906 aa10.03□□□□□ -0.8
LINC01616-201ENST00000561816 KIF3CO14782 793 aa10.02□□□□□ -0.81
LINC01616-201ENST00000561816 SOGA1O94964 1423 aa10.02□□□□□ -0.81
LINC01616-201ENST00000561816 HMGXB3Q12766 1538 aa10.02□□□□□ -0.81
LINC01616-201ENST00000561816 CLK2P49760 499 aaKnown RBP10.02□□□□□ -0.81
LINC01616-201ENST00000561816 NCAPD3P42695 1498 aa10.01□□□□□ -0.81
LINC01616-201ENST00000561816 TNIKQ9UKE5 1360 aa10□□□□□ -0.81
LINC01616-201ENST00000561816 IVNS1ABPQ9Y6Y0 642 aa10□□□□□ -0.81
LINC01616-201ENST00000561816 TSR1Q2NL82 804 aaKnown RBP9.99□□□□□ -0.81
LINC01616-201ENST00000561816 MS4A3Q96HJ5 214 aa9.99□□□□□ -0.81
LINC01616-201ENST00000561816 PTGER2P43116 358 aa9.99□□□□□ -0.81
LINC01616-201ENST00000561816 USP35Q9P2H5 1018 aa9.99□□□□□ -0.81
LINC01616-201ENST00000561816 PPP1R15AO75807 674 aaPredicted RBP9.98□□□□□ -0.81
LINC01616-201ENST00000561816 SRPK2P78362 688 aaKnown RBP9.98□□□□□ -0.81
LINC01616-201ENST00000561816 CFAP70Q5T0N1 1121 aa9.98□□□□□ -0.81
LINC01616-201ENST00000561816 TMEM92Q6UXU6 159 aa9.98□□□□□ -0.81
LINC01616-201ENST00000561816 SYNJ1O43426 1573 aa9.97□□□□□ -0.81
LINC01616-201ENST00000561816 TBC1D2Q9BYX2 928 aa9.97□□□□□ -0.81
LINC01616-201ENST00000561816 PAK3O75914 559 aaPredicted RBP9.96□□□□□ -0.81
LINC01616-201ENST00000561816 QPCTQ16769 361 aa9.96□□□□□ -0.82
LINC01616-201ENST00000561816 ZRANB1Q9UGI0 708 aa9.96□□□□□ -0.82
LINC01616-201ENST00000561816 CEP162Q5TB80 1403 aa9.95□□□□□ -0.82
LINC01616-201ENST00000561816 METTL3Q86U44 580 aaKnown RBP9.95□□□□□ -0.82
LINC01616-201ENST00000561816 PDCD7Q8N8D1 485 aaKnown RBP9.95□□□□□ -0.82
LINC01616-201ENST00000561816 GOLGA3Q08378 1498 aa9.95□□□□□ -0.82
LINC01616-201ENST00000561816 BRD1O95696 1058 aa9.95□□□□□ -0.82
LINC01616-201ENST00000561816 ZEB1P37275 1124 aaPredicted RBP9.95□□□□□ -0.82
LINC01616-201ENST00000561816 CSPP1Q1MSJ5 1256 aa9.95□□□□□ -0.82
LINC01616-201ENST00000561816 CCDC27Q2M243 656 aa9.95□□□□□ -0.82
LINC01616-201ENST00000561816 PBXIP1Q96AQ6 731 aa9.95□□□□□ -0.82
LINC01616-201ENST00000561816 RUSC2Q8N2Y8 1516 aa9.95□□□□□ -0.82
LINC01616-201ENST00000561816 TTLL13PA6NNM8 815 aa9.94□□□□□ -0.82
LINC01616-201ENST00000561816 GPR37L1O60883 481 aa9.94□□□□□ -0.82
LINC01616-201ENST00000561816 KIF21BO75037 1637 aa9.93□□□□□ -0.82
LINC01616-201ENST00000561816 EVI5O60447 810 aa9.93□□□□□ -0.82
LINC01616-201ENST00000561816 CEP164Q9UPV0 1460 aa9.93□□□□□ -0.82
LINC01616-201ENST00000561816 RBM33Q96EV2 1170 aaKnown RBP9.93□□□□□ -0.82
LINC01616-201ENST00000561816 ACIN1Q9UKV3 1341 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms