RNA–Protein interactions for RNA: ENST00000561521.1

LINC00662-201, long intergenic non-protein coding RNA 662, humanhuman

TSL 2 BASIC

Gene LINC00662, Length 2,480 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-201ENST00000561521 NUDCQ9Y266 331 aa12.94□□□□□ -0.34
LINC00662-201ENST00000561521 PRXQ9BXM0 1461 aa12.94□□□□□ -0.34
LINC00662-201ENST00000561521 PPP4R3BQ5MIZ7 849 aa12.94□□□□□ -0.34
LINC00662-201ENST00000561521 UGGT2Q9NYU1 1516 aa12.93□□□□□ -0.34
LINC00662-201ENST00000561521 LETM1O95202 739 aaPredicted RBP12.93□□□□□ -0.34
LINC00662-201ENST00000561521 CTTNBP2Q8WZ74 1663 aa12.92□□□□□ -0.34
LINC00662-201ENST00000561521 SLC20A2Q08357 652 aa12.92□□□□□ -0.34
LINC00662-201ENST00000561521 GOLGA6L3A6NEY3 463 aa12.91□□□□□ -0.34
LINC00662-201ENST00000561521 XRCC6P12956 609 aaKnown RBP eCLIP12.91□□□□□ -0.34
LINC00662-201ENST00000561521 PHLDB1Q86UU1 1377 aa12.91□□□□□ -0.34
LINC00662-201ENST00000561521 MRE11P49959 708 aa12.9□□□□□ -0.34
LINC00662-201ENST00000561521 CARMIL2Q6F5E8 1435 aa12.9□□□□□ -0.34
LINC00662-201ENST00000561521 TRHP20396 242 aaPredicted RBP12.89□□□□□ -0.35
LINC00662-201ENST00000561521 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.89□□□□□ -0.35
LINC00662-201ENST00000561521 OFD1O75665 1012 aa12.88□□□□□ -0.35
LINC00662-201ENST00000561521 ZNF830Q96NB3 372 aaPredicted RBP12.88□□□□□ -0.35
LINC00662-201ENST00000561521 RIPK4P57078 832 aa12.87□□□□□ -0.35
LINC00662-201ENST00000561521 AKNAQ7Z591 1439 aa12.87□□□□□ -0.35
LINC00662-201ENST00000561521 ADCY10Q96PN6 1610 aa12.87□□□□□ -0.35
LINC00662-201ENST00000561521 RNF216Q9NWF9 866 aaPredicted RBP12.87□□□□□ -0.35
LINC00662-201ENST00000561521 VIRMAQ69YN4 1812 aaKnown RBP12.87□□□□□ -0.35
LINC00662-201ENST00000561521 DISP1Q96F81 1524 aa12.87□□□□□ -0.35
LINC00662-201ENST00000561521 CNTLNQ9NXG0 1405 aa12.87□□□□□ -0.35
LINC00662-201ENST00000561521 KIAA1211Q6ZU35 1233 aa12.87□□□□□ -0.35
LINC00662-201ENST00000561521 SAMD1Q6SPF0 538 aaPredicted RBP12.86□□□□□ -0.35
LINC00662-201ENST00000561521 DHX37Q8IY37 1157 aaKnown RBP12.86□□□□□ -0.35
LINC00662-201ENST00000561521 CNKSR2Q8WXI2 1034 aa12.86□□□□□ -0.35
LINC00662-201ENST00000561521 POGKQ9P215 609 aa12.86□□□□□ -0.35
LINC00662-201ENST00000561521 UHRF1BP1LA0JNW5 1464 aa12.86□□□□□ -0.35
LINC00662-201ENST00000561521 TRIM44Q96DX7 344 aaPredicted RBP12.86□□□□□ -0.35
LINC00662-201ENST00000561521 KIAA0556O60303 1618 aa12.85□□□□□ -0.35
LINC00662-201ENST00000561521 IGSF3O75054 1194 aa12.85□□□□□ -0.35
LINC00662-201ENST00000561521 HSP90B1P14625 803 aaKnown RBP12.85□□□□□ -0.35
LINC00662-201ENST00000561521 ZSCAN20P17040 1043 aaPredicted RBP12.85□□□□□ -0.35
LINC00662-201ENST00000561521 SECISBP2LQ93073 1101 aaKnown RBP12.85□□□□□ -0.35
LINC00662-201ENST00000561521 MMP14P50281 582 aa12.84□□□□□ -0.35
LINC00662-201ENST00000561521 RAB3GAP2Q9H2M9 1393 aa12.84□□□□□ -0.35
LINC00662-201ENST00000561521 DYNC1I1O14576 645 aa12.84□□□□□ -0.35
LINC00662-201ENST00000561521 ZHX1Q9UKY1 873 aaPredicted RBP12.84□□□□□ -0.35
LINC00662-201ENST00000561521 SIN3AQ96ST3 1273 aa12.83□□□□□ -0.36
LINC00662-201ENST00000561521 CCDC94Q9BW85 323 aaPredicted RBP12.83□□□□□ -0.36
LINC00662-201ENST00000561521 CCNB3Q8WWL7 1395 aa12.83□□□□□ -0.36
LINC00662-201ENST00000561521 PTPRGP23470 1445 aa12.82□□□□□ -0.36
LINC00662-201ENST00000561521 RGS22Q8NE09 1264 aa12.82□□□□□ -0.36
LINC00662-201ENST00000561521 MYH16Q9H6N6 1097 aa12.82□□□□□ -0.36
LINC00662-201ENST00000561521 KIF13AQ9H1H9 1805 aa12.81□□□□□ -0.36
LINC00662-201ENST00000561521 SETD5Q9C0A6 1442 aa12.81□□□□□ -0.36
LINC00662-201ENST00000561521 POLR1AO95602 1720 aaPredicted RBP12.81□□□□□ -0.36
LINC00662-201ENST00000561521 IRX3P78415 501 aaPredicted RBP12.8□□□□□ -0.36
LINC00662-201ENST00000561521 CCDC144AA2RUR9 1427 aa12.8□□□□□ -0.36
LINC00662-201ENST00000561521 ABCC2Q92887 1545 aa12.79□□□□□ -0.36
LINC00662-201ENST00000561521 CFAP44Q96MT7 982 aa12.79□□□□□ -0.36
LINC00662-201ENST00000561521 ERBB4Q15303 1308 aa12.79□□□□□ -0.36
LINC00662-201ENST00000561521 SCAPERQ9BY12 1400 aa12.78□□□□□ -0.36
LINC00662-201ENST00000561521 ABCC10Q5T3U5 1492 aa12.78□□□□□ -0.36
LINC00662-201ENST00000561521 UACAQ9BZF9 1416 aa12.77□□□□□ -0.36
LINC00662-201ENST00000561521 CLGNO14967 610 aa12.77□□□□□ -0.37
LINC00662-201ENST00000561521 DIP2BQ9P265 1576 aa12.77□□□□□ -0.37
LINC00662-201ENST00000561521 SAMD9Q5K651 1589 aa12.76□□□□□ -0.37
LINC00662-201ENST00000561521 HS1BP3Q53T59 392 aa12.76□□□□□ -0.37
LINC00662-201ENST00000561521 AXDND1Q5T1B0 1012 aaPredicted RBP12.76□□□□□ -0.37
LINC00662-201ENST00000561521 KDM5BQ9UGL1 1544 aa12.75□□□□□ -0.37
LINC00662-201ENST00000561521 NPM1P06748 294 aaKnown RBP eCLIP12.75□□□□□ -0.37
LINC00662-201ENST00000561521 CDK11BP21127 795 aaKnown RBP12.75□□□□□ -0.37
LINC00662-201ENST00000561521 FAM161AQ3B820 660 aa12.75□□□□□ -0.37
LINC00662-201ENST00000561521 ZSCAN30Q86W11 494 aa12.74□□□□□ -0.37
LINC00662-201ENST00000561521 YY1AP1Q9H869 796 aa12.74□□□□□ -0.37
LINC00662-201ENST00000561521 PRKRIP1Q9H875 184 aaPredicted RBP12.74□□□□□ -0.37
LINC00662-201ENST00000561521 ABCA8O94911 1581 aa12.74□□□□□ -0.37
LINC00662-201ENST00000561521 GLI2P10070 1586 aa12.74□□□□□ -0.37
LINC00662-201ENST00000561521 RRP1P56182 461 aaKnown RBP12.74□□□□□ -0.37
LINC00662-201ENST00000561521 DNAJC2Q99543 621 aaKnown RBP12.73□□□□□ -0.37
LINC00662-201ENST00000561521 GRPEL1Q9HAV7 217 aa12.73□□□□□ -0.37
LINC00662-201ENST00000561521 PPP1R9BQ96SB3 815 aa12.73□□□□□ -0.37
LINC00662-201ENST00000561521 FBXO3Q9UK99 471 aa12.73□□□□□ -0.37
LINC00662-201ENST00000561521 PLB1Q6P1J6 1458 aa12.73□□□□□ -0.37
LINC00662-201ENST00000561521 BECN1Q14457 450 aa12.72□□□□□ -0.37
LINC00662-201ENST00000561521 PANK2Q9BZ23 570 aa12.72□□□□□ -0.37
LINC00662-201ENST00000561521 KTN1Q86UP2 1357 aaKnown RBP12.72□□□□□ -0.37
LINC00662-201ENST00000561521 ARID3AQ99856 593 aa12.72□□□□□ -0.37
LINC00662-201ENST00000561521 MAP3K1Q13233 1512 aa12.71□□□□□ -0.37
LINC00662-201ENST00000561521 CCDC173Q0VFZ6 552 aa12.71□□□□□ -0.37
LINC00662-201ENST00000561521 FOXD1Q16676 465 aa12.71□□□□□ -0.37
LINC00662-201ENST00000561521 ZNF622Q969S3 477 aaKnown RBP eCLIP12.71□□□□□ -0.37
LINC00662-201ENST00000561521 MYOM3Q5VTT5 1437 aa12.71□□□□□ -0.37
LINC00662-201ENST00000561521 CSPP1Q1MSJ5 1256 aa12.71□□□□□ -0.37
LINC00662-201ENST00000561521 FAM13BQ9NYF5 915 aa12.71□□□□□ -0.37
LINC00662-201ENST00000561521 ZCCHC11Q5TAX3 1644 aaKnown RBP12.71□□□□□ -0.38
LINC00662-201ENST00000561521 ZNF500O60304 480 aaPredicted RBP12.7□□□□□ -0.38
LINC00662-201ENST00000561521 PTMSP20962 102 aa12.7□□□□□ -0.38
LINC00662-201ENST00000561521 MRS2Q9HD23 443 aa12.7□□□□□ -0.38
LINC00662-201ENST00000561521 DNTTIP2Q5QJE6 756 aaKnown RBP12.69□□□□□ -0.38
LINC00662-201ENST00000561521 ANTXR1Q9H6X2 564 aa12.69□□□□□ -0.38
LINC00662-201ENST00000561521 SLC4A3P48751 1232 aa12.69□□□□□ -0.38
LINC00662-201ENST00000561521 EFCAB5A4FU69 1503 aa12.68□□□□□ -0.38
LINC00662-201ENST00000561521 TSPYL1Q9H0U9 437 aa12.68□□□□□ -0.38
LINC00662-201ENST00000561521 PLCD3Q8N3E9 789 aa12.68□□□□□ -0.38
LINC00662-201ENST00000561521 C8orf34Q49A92 452 aa12.67□□□□□ -0.38
LINC00662-201ENST00000561521 NCOA1Q15788 1441 aa12.67□□□□□ -0.38
LINC00662-201ENST00000561521 ASXL2Q76L83 1435 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms