RNA–Protein interactions for RNA: ENST00000561458.5

AC055874.1-201, humanhuman

TSL 2 BASIC

Gene AC055874.1, Length 479 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055874.1-201ENST00000561458 TYW1BQ6NUM6 668 aa9.65□□□□□ -0.86
AC055874.1-201ENST00000561458 FBXW7Q969H0 707 aa9.65□□□□□ -0.86
AC055874.1-201ENST00000561458 EMILIN3Q9NT22 766 aa9.65□□□□□ -0.86
AC055874.1-201ENST00000561458 PROX2Q3B8N5 592 aa9.64□□□□□ -0.87
AC055874.1-201ENST00000561458 PHF14O94880 888 aa9.63□□□□□ -0.87
AC055874.1-201ENST00000561458 COL9A1P20849 921 aa9.62□□□□□ -0.87
AC055874.1-201ENST00000561458 LAPTM4BQ86VI4 370 aa9.62□□□□□ -0.87
AC055874.1-201ENST00000561458 SLC24A1O60721 1099 aa9.59□□□□□ -0.87
AC055874.1-201ENST00000561458 ITGBL1O95965 494 aaPredicted RBP9.59□□□□□ -0.87
AC055874.1-201ENST00000561458 BCAMP50895 628 aa9.59□□□□□ -0.87
AC055874.1-201ENST00000561458 NYAP1Q6ZVC0 841 aa9.59□□□□□ -0.87
AC055874.1-201ENST00000561458 SOWAHBA6NEL2 793 aa9.58□□□□□ -0.88
AC055874.1-201ENST00000561458 KIAA1468Q9P260 1216 aa9.58□□□□□ -0.88
AC055874.1-201ENST00000561458 EPAS1Q99814 870 aa9.57□□□□□ -0.88
AC055874.1-201ENST00000561458 ONECUT3O60422 494 aaPredicted RBP9.56□□□□□ -0.88
AC055874.1-201ENST00000561458 ZFRQ96KR1 1074 aaKnown RBP9.56□□□□□ -0.88
AC055874.1-201ENST00000561458 CADPS2Q86UW7 1296 aa9.55□□□□□ -0.88
AC055874.1-201ENST00000561458 C6orf132Q5T0Z8 1188 aa9.54□□□□□ -0.88
AC055874.1-201ENST00000561458 SEPT9Q9UHD8 586 aaPredicted RBP9.53□□□□□ -0.88
AC055874.1-201ENST00000561458 TRIM6-TRIM34B2RNG4 842 aa9.52□□□□□ -0.89
AC055874.1-201ENST00000561458 DPYSL4O14531 572 aa9.52□□□□□ -0.89
AC055874.1-201ENST00000561458 CAMK2BQ13554 666 aa9.52□□□□□ -0.89
AC055874.1-201ENST00000561458 WBP1LQ9NX94 342 aa9.52□□□□□ -0.89
AC055874.1-201ENST00000561458 KCNC4Q03721 635 aa9.51□□□□□ -0.89
AC055874.1-201ENST00000561458 FAM98CQ17RN3 349 aaKnown RBP9.51□□□□□ -0.89
AC055874.1-201ENST00000561458 RBM33Q96EV2 1170 aaKnown RBP9.5□□□□□ -0.89
AC055874.1-201ENST00000561458 LRCH3Q96II8 777 aa9.49□□□□□ -0.89
AC055874.1-201ENST00000561458 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.49□□□□□ -0.89
AC055874.1-201ENST00000561458 TSR3Q9UJK0 312 aaKnown RBP9.48□□□□□ -0.89
AC055874.1-201ENST00000561458 DDX12PQ92771 950 aa9.47□□□□□ -0.89
AC055874.1-201ENST00000561458 HPS5Q9UPZ3 1129 aa9.47□□□□□ -0.89
AC055874.1-201ENST00000561458 Q6ZNB5 142 aa9.46□□□□□ -0.9
AC055874.1-201ENST00000561458 PLCB2Q00722 1185 aa9.44□□□□□ -0.9
AC055874.1-201ENST00000561458 NBR1Q14596 966 aa9.44□□□□□ -0.9
AC055874.1-201ENST00000561458 PACS2Q86VP3 889 aa9.44□□□□□ -0.9
AC055874.1-201ENST00000561458 MAP3K7O43318 606 aa9.43□□□□□ -0.9
AC055874.1-201ENST00000561458 EN1Q05925 392 aaPredicted RBP9.43□□□□□ -0.9
AC055874.1-201ENST00000561458 BBXQ8WY36 941 aaPredicted RBP9.42□□□□□ -0.9
AC055874.1-201ENST00000561458 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.42□□□□□ -0.9
AC055874.1-201ENST00000561458 PDIA6Q15084 440 aa9.4□□□□□ -0.9
AC055874.1-201ENST00000561458 TSR1Q2NL82 804 aaKnown RBP9.4□□□□□ -0.9
AC055874.1-201ENST00000561458 TSKSQ9UJT2 592 aa9.4□□□□□ -0.9
AC055874.1-201ENST00000561458 PPP4CP60510 307 aa9.39□□□□□ -0.91
AC055874.1-201ENST00000561458 LAPTM4AQ15012 233 aa9.39□□□□□ -0.91
AC055874.1-201ENST00000561458 SPDYE16A6NNV3 312 aaPredicted RBP9.37□□□□□ -0.91
AC055874.1-201ENST00000561458 CERKQ8TCT0 537 aa9.35□□□□□ -0.91
AC055874.1-201ENST00000561458 CDCA7LQ96GN5 454 aa9.35□□□□□ -0.91
AC055874.1-201ENST00000561458 HAP1P54257 671 aaPredicted RBP9.34□□□□□ -0.91
AC055874.1-201ENST00000561458 PRSS12P56730 875 aa9.34□□□□□ -0.91
AC055874.1-201ENST00000561458 PAXIP1Q6ZW49 1069 aaPredicted RBP9.34□□□□□ -0.91
AC055874.1-201ENST00000561458 SAMD7Q7Z3H4 446 aa9.34□□□□□ -0.91
AC055874.1-201ENST00000561458 CFAP44Q96MT7 982 aa9.34□□□□□ -0.91
AC055874.1-201ENST00000561458 NBPF26B4DH59 902 aa9.33□□□□□ -0.92
AC055874.1-201ENST00000561458 SMAPO00193 183 aa9.33□□□□□ -0.92
AC055874.1-201ENST00000561458 TJAP1Q5JTD0 557 aa9.32□□□□□ -0.92
AC055874.1-201ENST00000561458 GFRA3O60609 400 aa9.31□□□□□ -0.92
AC055874.1-201ENST00000561458 IL21Q9HBE4 155 aa9.31□□□□□ -0.92
AC055874.1-201ENST00000561458 MTRQ99707 1265 aa9.3□□□□□ -0.92
AC055874.1-201ENST00000561458 PNMA3Q9UL41 463 aa9.3□□□□□ -0.92
AC055874.1-201ENST00000561458 SPRYD3Q8NCJ5 442 aa9.29□□□□□ -0.92
AC055874.1-201ENST00000561458 TATDN2Q93075 761 aa9.29□□□□□ -0.92
AC055874.1-201ENST00000561458 PRKD2Q9BZL6 878 aa9.29□□□□□ -0.92
AC055874.1-201ENST00000561458 FAM198AQ9UFP1 575 aa9.29□□□□□ -0.92
AC055874.1-201ENST00000561458 GRXCR2A6NFK2 248 aa9.28□□□□□ -0.92
AC055874.1-201ENST00000561458 RNF40O75150 1001 aa9.28□□□□□ -0.92
AC055874.1-201ENST00000561458 HDGFP51858 240 aaKnown RBP9.28□□□□□ -0.92
AC055874.1-201ENST00000561458 E2F4Q16254 413 aa9.28□□□□□ -0.92
AC055874.1-201ENST00000561458 TRAF7Q6Q0C0 670 aa9.27□□□□□ -0.93
AC055874.1-201ENST00000561458 NRG2O14511 850 aaPredicted RBP9.26□□□□□ -0.93
AC055874.1-201ENST00000561458 PRIM1P49642 420 aaKnown RBP9.26□□□□□ -0.93
AC055874.1-201ENST00000561458 PPP1R18Q6NYC8 613 aa9.26□□□□□ -0.93
AC055874.1-201ENST00000561458 RBM27Q9P2N5 1060 aaKnown RBP9.26□□□□□ -0.93
AC055874.1-201ENST00000561458 CCDC180Q9P1Z9 1646 aa9.26□□□□□ -0.93
AC055874.1-201ENST00000561458 C3orf80F5H4A9 247 aa9.25□□□□□ -0.93
AC055874.1-201ENST00000561458 NECTIN2Q92692 538 aa9.25□□□□□ -0.93
AC055874.1-201ENST00000561458 ARIH1Q9Y4X5 557 aaPredicted RBP9.25□□□□□ -0.93
AC055874.1-201ENST00000561458 V9GY48 417 aaPredicted RBP9.25□□□□□ -0.93
AC055874.1-201ENST00000561458 ZCCHC6Q5VYS8 1495 aaKnown RBP9.24□□□□□ -0.93
AC055874.1-201ENST00000561458 NUDT18Q6ZVK8 323 aa9.24□□□□□ -0.93
AC055874.1-201ENST00000561458 WDR70Q9NW82 654 aa9.24□□□□□ -0.93
AC055874.1-201ENST00000561458 LCE2BO14633 110 aa9.23□□□□□ -0.93
AC055874.1-201ENST00000561458 CDHR5Q9HBB8 845 aa9.23□□□□□ -0.93
AC055874.1-201ENST00000561458 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.23□□□□□ -0.93
AC055874.1-201ENST00000561458 APLP1P51693 650 aa9.22□□□□□ -0.93
AC055874.1-201ENST00000561458 ZNF516Q92618 1163 aa9.22□□□□□ -0.93
AC055874.1-201ENST00000561458 OSBPP22059 807 aa9.21□□□□□ -0.94
AC055874.1-201ENST00000561458 GGCXP38435 758 aa9.2□□□□□ -0.94
AC055874.1-201ENST00000561458 SLF2Q8IX21 1173 aa9.2□□□□□ -0.94
AC055874.1-201ENST00000561458 SLC4A3P48751 1232 aa9.19□□□□□ -0.94
AC055874.1-201ENST00000561458 COPS2P61201 443 aa9.17□□□□□ -0.94
AC055874.1-201ENST00000561458 SWT1Q5T5J6 900 aaKnown RBP9.17□□□□□ -0.94
AC055874.1-201ENST00000561458 PADI6Q6TGC4 694 aa9.17□□□□□ -0.94
AC055874.1-201ENST00000561458 PDZRN3Q9UPQ7 1066 aa9.17□□□□□ -0.94
AC055874.1-201ENST00000561458 HRCP23327 699 aa9.16□□□□□ -0.94
AC055874.1-201ENST00000561458 VSIG10Q8N0Z9 540 aa9.16□□□□□ -0.94
AC055874.1-201ENST00000561458 TTC13Q8NBP0 860 aa9.16□□□□□ -0.94
AC055874.1-201ENST00000561458 NKX2-3Q8TAU0 364 aa9.16□□□□□ -0.94
AC055874.1-201ENST00000561458 TMUB1Q9BVT8 246 aa9.14□□□□□ -0.95
AC055874.1-201ENST00000561458 PRR14Q9BWN1 585 aa9.14□□□□□ -0.95
AC055874.1-201ENST00000561458 TSHZ2Q9NRE2 1034 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms