RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 RYDENQ9NUL5 291 aaKnown RBP6.8□□□□□ -1.32
SPG11-225ENST00000561391 MYO15BQ96JP2 1530 aa6.8□□□□□ -1.32
SPG11-225ENST00000561391 NESP48681 1621 aa6.79□□□□□ -1.32
SPG11-225ENST00000561391 EVI5O60447 810 aa6.78□□□□□ -1.32
SPG11-225ENST00000561391 LAPTM4AQ15012 233 aa6.78□□□□□ -1.32
SPG11-225ENST00000561391 ADAM33Q9BZ11 813 aa6.78□□□□□ -1.32
SPG11-225ENST00000561391 CRISPLD2Q9H0B8 497 aa6.78□□□□□ -1.32
SPG11-225ENST00000561391 LCE2BO14633 110 aa6.77□□□□□ -1.33
SPG11-225ENST00000561391 CYB5RLQ6IPT4 315 aa6.77□□□□□ -1.33
SPG11-225ENST00000561391 PPP1R3GB7ZBB8 358 aa6.76□□□□□ -1.33
SPG11-225ENST00000561391 PDE4AP27815 886 aa6.76□□□□□ -1.33
SPG11-225ENST00000561391 BBXQ8WY36 941 aaPredicted RBP6.75□□□□□ -1.33
SPG11-225ENST00000561391 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.75□□□□□ -1.33
SPG11-225ENST00000561391 ITGBL1O95965 494 aaPredicted RBP6.74□□□□□ -1.33
SPG11-225ENST00000561391 BCAMP50895 628 aa6.74□□□□□ -1.33
SPG11-225ENST00000561391 MAP3K9P80192 1104 aa6.74□□□□□ -1.33
SPG11-225ENST00000561391 PLCB2Q00722 1185 aa6.74□□□□□ -1.33
SPG11-225ENST00000561391 PROX2Q3B8N5 592 aa6.74□□□□□ -1.33
SPG11-225ENST00000561391 ANO8Q9HCE9 1232 aaPredicted RBP6.74□□□□□ -1.33
SPG11-225ENST00000561391 RABGEF1Q9UJ41 708 aa6.74□□□□□ -1.33
SPG11-225ENST00000561391 CFAP44Q96MT7 982 aa6.73□□□□□ -1.33
SPG11-225ENST00000561391 ZNF787Q6DD87 383 aa6.72□□□□□ -1.33
SPG11-225ENST00000561391 PAXIP1Q6ZW49 1069 aaPredicted RBP6.72□□□□□ -1.33
SPG11-225ENST00000561391 DDX27Q96GQ7 796 aaKnown RBP6.72□□□□□ -1.33
SPG11-225ENST00000561391 THOC2Q8NI27 1593 aaKnown RBP6.72□□□□□ -1.33
SPG11-225ENST00000561391 NCKAP5LQ9HCH0 1330 aa6.72□□□□□ -1.33
SPG11-225ENST00000561391 HAP1P54257 671 aaPredicted RBP6.71□□□□□ -1.34
SPG11-225ENST00000561391 KCNC4Q03721 635 aa6.71□□□□□ -1.34
SPG11-225ENST00000561391 NKX1-1Q15270 411 aaPredicted RBP6.71□□□□□ -1.34
SPG11-225ENST00000561391 NYAP1Q6ZVC0 841 aa6.71□□□□□ -1.34
SPG11-225ENST00000561391 ZNF775Q96BV0 537 aaPredicted RBP6.71□□□□□ -1.34
SPG11-225ENST00000561391 LARP6Q9BRS8 491 aaKnown RBP6.71□□□□□ -1.34
SPG11-225ENST00000561391 RIMBP3CA6NJZ7 1639 aa6.71□□□□□ -1.34
SPG11-225ENST00000561391 RIMBP3BA6NNM3 1639 aa6.71□□□□□ -1.34
SPG11-225ENST00000561391 RIMBP3Q9UFD9 1639 aa6.71□□□□□ -1.34
SPG11-225ENST00000561391 SOWAHBA6NEL2 793 aa6.7□□□□□ -1.34
SPG11-225ENST00000561391 GFRA3O60609 400 aa6.7□□□□□ -1.34
SPG11-225ENST00000561391 LAPTM4BQ86VI4 370 aa6.7□□□□□ -1.34
SPG11-225ENST00000561391 SMARCA2P51531 1590 aa6.69□□□□□ -1.34
SPG11-225ENST00000561391 BAZ1AQ9NRL2 1556 aaPredicted RBP6.69□□□□□ -1.34
SPG11-225ENST00000561391 ZFRQ96KR1 1074 aaKnown RBP6.69□□□□□ -1.34
SPG11-225ENST00000561391 PCDHGA10Q9Y5H3 936 aa6.69□□□□□ -1.34
SPG11-225ENST00000561391 COL9A1P20849 921 aa6.68□□□□□ -1.34
SPG11-225ENST00000561391 TYW1BQ6NUM6 668 aa6.68□□□□□ -1.34
SPG11-225ENST00000561391 SPRYD3Q8NCJ5 442 aa6.68□□□□□ -1.34
SPG11-225ENST00000561391 FBXW7Q969H0 707 aa6.68□□□□□ -1.34
SPG11-225ENST00000561391 WBP1LQ9NX94 342 aa6.68□□□□□ -1.34
SPG11-225ENST00000561391 SEPT9Q9UHD8 586 aaPredicted RBP6.68□□□□□ -1.34
SPG11-225ENST00000561391 KIAA1468Q9P260 1216 aa6.67□□□□□ -1.34
SPG11-225ENST00000561391 PHF14O94880 888 aa6.65□□□□□ -1.34
SPG11-225ENST00000561391 LRCH3Q96II8 777 aa6.65□□□□□ -1.34
SPG11-225ENST00000561391 HPS5Q9UPZ3 1129 aa6.65□□□□□ -1.34
SPG11-225ENST00000561391 NCAPD3P42695 1498 aa6.65□□□□□ -1.35
SPG11-225ENST00000561391 EMILIN3Q9NT22 766 aa6.64□□□□□ -1.35
SPG11-225ENST00000561391 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.64□□□□□ -1.35
SPG11-225ENST00000561391 MFSD10Q14728 455 aa6.63□□□□□ -1.35
SPG11-225ENST00000561391 FAM98CQ17RN3 349 aaKnown RBP6.63□□□□□ -1.35
SPG11-225ENST00000561391 TSR3Q9UJK0 312 aaKnown RBP6.63□□□□□ -1.35
SPG11-225ENST00000561391 ARHGEF11O15085 1522 aa6.62□□□□□ -1.35
SPG11-225ENST00000561391 TRIM6-TRIM34B2RNG4 842 aa6.61□□□□□ -1.35
SPG11-225ENST00000561391 ONECUT3O60422 494 aaPredicted RBP6.61□□□□□ -1.35
SPG11-225ENST00000561391 C6orf132Q5T0Z8 1188 aa6.61□□□□□ -1.35
SPG11-225ENST00000561391 EPAS1Q99814 870 aa6.61□□□□□ -1.35
SPG11-225ENST00000561391 KIF21AQ7Z4S6 1674 aa6.61□□□□□ -1.35
SPG11-225ENST00000561391 PDS5BQ9NTI5 1447 aa6.6□□□□□ -1.35
SPG11-225ENST00000561391 LOC100996750A0A140TA64 210 aa6.6□□□□□ -1.35
SPG11-225ENST00000561391 NRG2O14511 850 aaPredicted RBP6.6□□□□□ -1.35
SPG11-225ENST00000561391 RBM33Q96EV2 1170 aaKnown RBP6.6□□□□□ -1.35
SPG11-225ENST00000561391 KRTAP4-6Q9BYQ5 205 aa6.6□□□□□ -1.35
SPG11-225ENST00000561391 GTPBP6O43824 516 aaPredicted RBP6.58□□□□□ -1.36
SPG11-225ENST00000561391 PPP4CP60510 307 aa6.58□□□□□ -1.36
SPG11-225ENST00000561391 PRKD2Q9BZL6 878 aa6.58□□□□□ -1.36
SPG11-225ENST00000561391 TSHZ2Q9NRE2 1034 aa6.58□□□□□ -1.36
SPG11-225ENST00000561391 PACS2Q86VP3 889 aa6.57□□□□□ -1.36
SPG11-225ENST00000561391 ATAD2BQ9ULI0 1458 aa6.56□□□□□ -1.36
SPG11-225ENST00000561391 DPYSL4O14531 572 aa6.56□□□□□ -1.36
SPG11-225ENST00000561391 DDX12PQ92771 950 aa6.56□□□□□ -1.36
SPG11-225ENST00000561391 LAMC3Q9Y6N6 1575 aa6.55□□□□□ -1.36
SPG11-225ENST00000561391 MRC2Q9UBG0 1479 aa6.54□□□□□ -1.36
SPG11-225ENST00000561391 MAP3K7O43318 606 aa6.54□□□□□ -1.36
SPG11-225ENST00000561391 NBR1Q14596 966 aa6.54□□□□□ -1.36
SPG11-225ENST00000561391 RNF40O75150 1001 aa6.53□□□□□ -1.36
SPG11-225ENST00000561391 VSIG10Q8N0Z9 540 aa6.53□□□□□ -1.36
SPG11-225ENST00000561391 ARAP1Q96P48 1450 aa6.53□□□□□ -1.36
SPG11-225ENST00000561391 DCAF1Q9Y4B6 1507 aa6.52□□□□□ -1.37
SPG11-225ENST00000561391 PPP1R18Q6NYC8 613 aa6.52□□□□□ -1.37
SPG11-225ENST00000561391 SAMD7Q7Z3H4 446 aa6.52□□□□□ -1.37
SPG11-225ENST00000561391 MTRQ99707 1265 aa6.52□□□□□ -1.37
SPG11-225ENST00000561391 IL21Q9HBE4 155 aa6.52□□□□□ -1.37
SPG11-225ENST00000561391 TSKSQ9UJT2 592 aa6.52□□□□□ -1.37
SPG11-225ENST00000561391 WDR62O43379 1518 aa6.51□□□□□ -1.37
SPG11-225ENST00000561391 SMAPO00193 183 aa6.51□□□□□ -1.37
SPG11-225ENST00000561391 EN1Q05925 392 aaPredicted RBP6.51□□□□□ -1.37
SPG11-225ENST00000561391 TSR1Q2NL82 804 aaKnown RBP6.51□□□□□ -1.37
SPG11-225ENST00000561391 TJAP1Q5JTD0 557 aa6.51□□□□□ -1.37
SPG11-225ENST00000561391 CADPS2Q86UW7 1296 aa6.51□□□□□ -1.37
SPG11-225ENST00000561391 KDM2AQ9Y2K7 1162 aa6.51□□□□□ -1.37
SPG11-225ENST00000561391 V9GY48 417 aaPredicted RBP6.51□□□□□ -1.37
SPG11-225ENST00000561391 PDZRN3Q9UPQ7 1066 aa6.5□□□□□ -1.37
SPG11-225ENST00000561391 ZCCHC6Q5VYS8 1495 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms