RNA–Protein interactions for RNA: ENST00000561225.1

MARK3-225, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-225ENST00000561225 UBAP1LF5GYI3 381 aa13.13□□□□□ -0.31
MARK3-225ENST00000561225 ESF1Q9H501 851 aaKnown RBP13.13□□□□□ -0.31
MARK3-225ENST00000561225 MYT1LQ9UL68 1186 aa13.13□□□□□ -0.31
MARK3-225ENST00000561225 KIF14Q15058 1648 aa13.13□□□□□ -0.31
MARK3-225ENST00000561225 ABCA6Q8N139 1617 aa13.13□□□□□ -0.31
MARK3-225ENST00000561225 ARHGAP5Q13017 1502 aa13.13□□□□□ -0.31
MARK3-225ENST00000561225 CAMSAP1Q5T5Y3 1602 aa13.12□□□□□ -0.31
MARK3-225ENST00000561225 ZNF335Q9H4Z2 1342 aaPredicted RBP13.12□□□□□ -0.31
MARK3-225ENST00000561225 FARP1Q9Y4F1 1045 aaPredicted RBP13.11□□□□□ -0.31
MARK3-225ENST00000561225 CDK11AQ9UQ88 783 aaPredicted RBP13.1□□□□□ -0.31
MARK3-225ENST00000561225 CNTLNQ9NXG0 1405 aa13.1□□□□□ -0.31
MARK3-225ENST00000561225 TROQ12816 1431 aaPredicted RBP13.09□□□□□ -0.31
MARK3-225ENST00000561225 NPATQ14207 1427 aa13.09□□□□□ -0.31
MARK3-225ENST00000561225 EEA1Q15075 1411 aa13.09□□□□□ -0.31
MARK3-225ENST00000561225 ATP1B4Q9UN42 357 aaPredicted RBP13.09□□□□□ -0.31
MARK3-225ENST00000561225 NCKAP5LQ9HCH0 1330 aa13.09□□□□□ -0.31
MARK3-225ENST00000561225 FMN1Q68DA7 1419 aa13.07□□□□□ -0.32
MARK3-225ENST00000561225 DCBLD2Q96PD2 775 aa13.07□□□□□ -0.32
MARK3-225ENST00000561225 ABCC1P33527 1531 aa13.05□□□□□ -0.32
MARK3-225ENST00000561225 ZMYM3Q14202 1370 aa13.05□□□□□ -0.32
MARK3-225ENST00000561225 CLIP1P30622 1438 aa13.05□□□□□ -0.32
MARK3-225ENST00000561225 PLA2R1Q13018 1463 aa13.04□□□□□ -0.32
MARK3-225ENST00000561225 MED1Q15648 1581 aaPredicted RBP13.04□□□□□ -0.32
MARK3-225ENST00000561225 PKD2Q13563 968 aa13.04□□□□□ -0.32
MARK3-225ENST00000561225 CDC42BPBQ9Y5S2 1711 aa13.04□□□□□ -0.32
MARK3-225ENST00000561225 KIDINS220Q9ULH0 1771 aa13.04□□□□□ -0.32
MARK3-225ENST00000561225 TCOF1Q13428 1488 aaKnown RBP13.04□□□□□ -0.32
MARK3-225ENST00000561225 MROH2AA6NES4 1674 aa13.03□□□□□ -0.32
MARK3-225ENST00000561225 HSPA1LP34931 641 aa13.03□□□□□ -0.32
MARK3-225ENST00000561225 ARHGAP35Q9NRY4 1499 aa13.02□□□□□ -0.33
MARK3-225ENST00000561225 ITSN2Q9NZM3 1697 aa13.02□□□□□ -0.33
MARK3-225ENST00000561225 PREX2Q70Z35 1606 aa13.01□□□□□ -0.33
MARK3-225ENST00000561225 ZNF142P52746 1687 aaPredicted RBP13.01□□□□□ -0.33
MARK3-225ENST00000561225 MYO3AQ8NEV4 1616 aa13□□□□□ -0.33
MARK3-225ENST00000561225 SPDYE4A6NLX3 237 aa13□□□□□ -0.33
MARK3-225ENST00000561225 CEP170BQ9Y4F5 1589 aaPredicted RBP12.99□□□□□ -0.33
MARK3-225ENST00000561225 PTPRKQ15262 1439 aa12.99□□□□□ -0.33
MARK3-225ENST00000561225 PIP4K2BP78356 416 aa12.98□□□□□ -0.33
MARK3-225ENST00000561225 SAMD9LQ8IVG5 1584 aa12.98□□□□□ -0.33
MARK3-225ENST00000561225 LRRIQ1Q96JM4 1722 aa12.97□□□□□ -0.33
MARK3-225ENST00000561225 TOM1O60784 492 aa12.96□□□□□ -0.33
MARK3-225ENST00000561225 CLTCQ00610 1675 aaKnown RBP12.96□□□□□ -0.34
MARK3-225ENST00000561225 PLXNC1O60486 1568 aa12.94□□□□□ -0.34
MARK3-225ENST00000561225 SPAG9O60271 1321 aaKnown RBP12.94□□□□□ -0.34
MARK3-225ENST00000561225 UBTFP17480 764 aaKnown RBP12.94□□□□□ -0.34
MARK3-225ENST00000561225 ZNF579Q8NAF0 562 aaKnown RBP12.94□□□□□ -0.34
MARK3-225ENST00000561225 SUPT6HQ7KZ85 1726 aaKnown RBP12.93□□□□□ -0.34
MARK3-225ENST00000561225 CPS1P31327 1500 aa12.93□□□□□ -0.34
MARK3-225ENST00000561225 SYCP2Q9BX26 1530 aa12.93□□□□□ -0.34
MARK3-225ENST00000561225 A2ML1A8K2U0 1454 aa12.92□□□□□ -0.34
MARK3-225ENST00000561225 CDC42BPAQ5VT25 1732 aa12.92□□□□□ -0.34
MARK3-225ENST00000561225 GGT6Q6P531 493 aa12.92□□□□□ -0.34
MARK3-225ENST00000561225 ZRANB1Q9UGI0 708 aa12.92□□□□□ -0.34
MARK3-225ENST00000561225 ZNF777Q9ULD5 760 aaPredicted RBP12.92□□□□□ -0.34
MARK3-225ENST00000561225 ATP7AQ04656 1500 aa12.92□□□□□ -0.34
MARK3-225ENST00000561225 DNMT1P26358 1616 aaKnown RBP12.91□□□□□ -0.34
MARK3-225ENST00000561225 A2MP01023 1474 aa12.91□□□□□ -0.34
MARK3-225ENST00000561225 SHANK2Q9UPX8 1470 aa12.91□□□□□ -0.34
MARK3-225ENST00000561225 HNRNPMP52272 730 aaKnown RBP eCLIP12.91□□□□□ -0.34
MARK3-225ENST00000561225 CCDC18Q5T9S5 1454 aa12.91□□□□□ -0.34
MARK3-225ENST00000561225 NEURL4Q96JN8 1562 aa12.9□□□□□ -0.34
MARK3-225ENST00000561225 ALKQ9UM73 1620 aa12.9□□□□□ -0.34
MARK3-225ENST00000561225 INO80Q9ULG1 1556 aaPredicted RBP12.9□□□□□ -0.35
MARK3-225ENST00000561225 CASKIN1Q8WXD9 1431 aa12.88□□□□□ -0.35
MARK3-225ENST00000561225 GPATCH8Q9UKJ3 1502 aaKnown RBP12.88□□□□□ -0.35
MARK3-225ENST00000561225 KIAA1107Q9UPP5 1409 aa12.88□□□□□ -0.35
MARK3-225ENST00000561225 VWDEQ8N2E2 1590 aa12.86□□□□□ -0.35
MARK3-225ENST00000561225 POLR1AO95602 1720 aaPredicted RBP12.86□□□□□ -0.35
MARK3-225ENST00000561225 STAG3Q9UJ98 1225 aa12.86□□□□□ -0.35
MARK3-225ENST00000561225 OTUD5Q96G74 571 aa12.85□□□□□ -0.35
MARK3-225ENST00000561225 PLEKHH2Q8IVE3 1493 aa12.85□□□□□ -0.35
MARK3-225ENST00000561225 TNRQ92752 1358 aa12.84□□□□□ -0.35
MARK3-225ENST00000561225 FBXO31Q5XUX0 539 aaPredicted RBP12.84□□□□□ -0.35
MARK3-225ENST00000561225 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.83□□□□□ -0.36
MARK3-225ENST00000561225 ANKLE2Q86XL3 938 aa12.83□□□□□ -0.36
MARK3-225ENST00000561225 CFDP1Q9UEE9 299 aaPredicted RBP12.83□□□□□ -0.36
MARK3-225ENST00000561225 RGS17Q9UGC6 210 aaPredicted RBP12.83□□□□□ -0.36
MARK3-225ENST00000561225 GALR2O43603 387 aaPredicted RBP12.82□□□□□ -0.36
MARK3-225ENST00000561225 MED14O60244 1454 aa12.82□□□□□ -0.36
MARK3-225ENST00000561225 NPHP4O75161 1426 aaPredicted RBP12.81□□□□□ -0.36
MARK3-225ENST00000561225 ADGBQ8N7X0 1667 aa12.81□□□□□ -0.36
MARK3-225ENST00000561225 PZPP20742 1482 aa12.81□□□□□ -0.36
MARK3-225ENST00000561225 FYCO1Q9BQS8 1478 aa12.8□□□□□ -0.36
MARK3-225ENST00000561225 DHX29Q7Z478 1369 aaKnown RBP12.8□□□□□ -0.36
MARK3-225ENST00000561225 LRRC7Q96NW7 1537 aa12.79□□□□□ -0.36
MARK3-225ENST00000561225 THEMISQ8N1K5 641 aaPredicted RBP12.79□□□□□ -0.36
MARK3-225ENST00000561225 DEPDC5O75140 1603 aa12.79□□□□□ -0.36
MARK3-225ENST00000561225 CCNB3Q8WWL7 1395 aa12.79□□□□□ -0.36
MARK3-225ENST00000561225 CREBZFQ9NS37 354 aa12.78□□□□□ -0.36
MARK3-225ENST00000561225 MIA2Q96PC5 1412 aa12.78□□□□□ -0.36
MARK3-225ENST00000561225 NLRP1Q9C000 1473 aa12.78□□□□□ -0.36
MARK3-225ENST00000561225 MBD5Q9P267 1494 aa12.78□□□□□ -0.36
MARK3-225ENST00000561225 KDM5DQ9BY66 1539 aa12.78□□□□□ -0.36
MARK3-225ENST00000561225 UGGT1Q9NYU2 1555 aa12.77□□□□□ -0.36
MARK3-225ENST00000561225 POTEMA6NI47 508 aa12.77□□□□□ -0.37
MARK3-225ENST00000561225 POTEB2H3BUK9 544 aa12.77□□□□□ -0.37
MARK3-225ENST00000561225 ZNF644Q9H582 1327 aaPredicted RBP12.77□□□□□ -0.37
MARK3-225ENST00000561225 RTEL1-TNFRSF6BF6WH68 1400 aa12.77□□□□□ -0.37
MARK3-225ENST00000561225 FAM135AQ9P2D6 1515 aa12.77□□□□□ -0.37
MARK3-225ENST00000561225 RNF17Q9BXT8 1623 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms