RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 ZFRQ96KR1 1074 aaKnown RBP12.39□□□□□ -0.43
USP8-216ENST00000561206 PCDHGA10Q9Y5H3 936 aa12.39□□□□□ -0.43
USP8-216ENST00000561206 NKX1-1Q15270 411 aaPredicted RBP12.38□□□□□ -0.43
USP8-216ENST00000561206 WBP1LQ9NX94 342 aa12.37□□□□□ -0.43
USP8-216ENST00000561206 FBXW7Q969H0 707 aa12.36□□□□□ -0.43
USP8-216ENST00000561206 TRAF7Q6Q0C0 670 aa12.35□□□□□ -0.43
USP8-216ENST00000561206 MAP3K9P80192 1104 aa12.32□□□□□ -0.44
USP8-216ENST00000561206 MFSD10Q14728 455 aa12.32□□□□□ -0.44
USP8-216ENST00000561206 KIAA1468Q9P260 1216 aa12.32□□□□□ -0.44
USP8-216ENST00000561206 PHF14O94880 888 aa12.31□□□□□ -0.44
USP8-216ENST00000561206 TYW1BQ6NUM6 668 aa12.31□□□□□ -0.44
USP8-216ENST00000561206 GFRA3O60609 400 aa12.3□□□□□ -0.44
USP8-216ENST00000561206 CHGAP10645 457 aaKnown RBP12.29□□□□□ -0.44
USP8-216ENST00000561206 DDX27Q96GQ7 796 aaKnown RBP12.29□□□□□ -0.44
USP8-216ENST00000561206 EMILIN3Q9NT22 766 aa12.28□□□□□ -0.44
USP8-216ENST00000561206 TSR3Q9UJK0 312 aaKnown RBP12.28□□□□□ -0.44
USP8-216ENST00000561206 FAM98CQ17RN3 349 aaKnown RBP12.27□□□□□ -0.45
USP8-216ENST00000561206 LARP6Q9BRS8 491 aaKnown RBP12.26□□□□□ -0.45
USP8-216ENST00000561206 NRG2O14511 850 aaPredicted RBP12.25□□□□□ -0.45
USP8-216ENST00000561206 TRIM6-TRIM34B2RNG4 842 aa12.23□□□□□ -0.45
USP8-216ENST00000561206 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.23□□□□□ -0.45
USP8-216ENST00000561206 SEPT9Q9UHD8 586 aaPredicted RBP12.23□□□□□ -0.45
USP8-216ENST00000561206 C6orf132Q5T0Z8 1188 aa12.22□□□□□ -0.45
USP8-216ENST00000561206 HPS5Q9UPZ3 1129 aa12.22□□□□□ -0.45
USP8-216ENST00000561206 LRCH3Q96II8 777 aa12.21□□□□□ -0.45
USP8-216ENST00000561206 EPAS1Q99814 870 aa12.21□□□□□ -0.45
USP8-216ENST00000561206 V9GY48 417 aaPredicted RBP12.2□□□□□ -0.46
USP8-216ENST00000561206 TJAP1Q5JTD0 557 aa12.18□□□□□ -0.46
USP8-216ENST00000561206 PRKD2Q9BZL6 878 aa12.17□□□□□ -0.46
USP8-216ENST00000561206 GTPBP6O43824 516 aaPredicted RBP12.13□□□□□ -0.47
USP8-216ENST00000561206 PPP4CP60510 307 aa12.09□□□□□ -0.47
USP8-216ENST00000561206 CAMK2BQ13554 666 aa12.09□□□□□ -0.47
USP8-216ENST00000561206 ZNF787Q6DD87 383 aa12.09□□□□□ -0.47
USP8-216ENST00000561206 PPP1R18Q6NYC8 613 aa12.08□□□□□ -0.48
USP8-216ENST00000561206 PACS2Q86VP3 889 aa12.07□□□□□ -0.48
USP8-216ENST00000561206 IL21Q9HBE4 155 aa12.07□□□□□ -0.48
USP8-216ENST00000561206 TSKSQ9UJT2 592 aa12.07□□□□□ -0.48
USP8-216ENST00000561206 MTRQ99707 1265 aa12.05□□□□□ -0.48
USP8-216ENST00000561206 ZNF775Q96BV0 537 aaPredicted RBP12.04□□□□□ -0.48
USP8-216ENST00000561206 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.04□□□□□ -0.48
USP8-216ENST00000561206 PDZRN3Q9UPQ7 1066 aa12.01□□□□□ -0.49
USP8-216ENST00000561206 EN1Q05925 392 aaPredicted RBP12□□□□□ -0.49
USP8-216ENST00000561206 SAMD7Q7Z3H4 446 aa12□□□□□ -0.49
USP8-216ENST00000561206 RBM33Q96EV2 1170 aaKnown RBP12□□□□□ -0.49
USP8-216ENST00000561206 DPYSL4O14531 572 aa11.98□□□□□ -0.49
USP8-216ENST00000561206 CADPS2Q86UW7 1296 aa11.97□□□□□ -0.49
USP8-216ENST00000561206 ZNF516Q92618 1163 aa11.96□□□□□ -0.49
USP8-216ENST00000561206 DDX12PQ92771 950 aa11.95□□□□□ -0.5
USP8-216ENST00000561206 TSR1Q2NL82 804 aaKnown RBP11.94□□□□□ -0.5
USP8-216ENST00000561206 CDCA7LQ96GN5 454 aa11.93□□□□□ -0.5
USP8-216ENST00000561206 TMUB1Q9BVT8 246 aa11.93□□□□□ -0.5
USP8-216ENST00000561206 FAM198AQ9UFP1 575 aa11.93□□□□□ -0.5
USP8-216ENST00000561206 PRSS12P56730 875 aa11.92□□□□□ -0.5
USP8-216ENST00000561206 CERKQ8TCT0 537 aa11.91□□□□□ -0.5
USP8-216ENST00000561206 MAP3K7O43318 606 aa11.9□□□□□ -0.5
USP8-216ENST00000561206 APLP1P51693 650 aa11.9□□□□□ -0.5
USP8-216ENST00000561206 C3orf80F5H4A9 247 aa11.89□□□□□ -0.51
USP8-216ENST00000561206 SMAPO00193 183 aa11.89□□□□□ -0.51
USP8-216ENST00000561206 GGCXP38435 758 aa11.89□□□□□ -0.51
USP8-216ENST00000561206 NBR1Q14596 966 aa11.89□□□□□ -0.51
USP8-216ENST00000561206 TRIM67Q6ZTA4 783 aa11.89□□□□□ -0.51
USP8-216ENST00000561206 NKX2-3Q8TAU0 364 aa11.89□□□□□ -0.51
USP8-216ENST00000561206 TATDN2Q93075 761 aa11.89□□□□□ -0.51
USP8-216ENST00000561206 PDIA6Q15084 440 aa11.88□□□□□ -0.51
USP8-216ENST00000561206 NBPF26B4DH59 902 aa11.87□□□□□ -0.51
USP8-216ENST00000561206 NECTIN2Q92692 538 aa11.85□□□□□ -0.51
USP8-216ENST00000561206 RBM27Q9P2N5 1060 aaKnown RBP11.83□□□□□ -0.52
USP8-216ENST00000561206 PNMA3Q9UL41 463 aa11.83□□□□□ -0.52
USP8-216ENST00000561206 DGAT1O75907 488 aa11.82□□□□□ -0.52
USP8-216ENST00000561206 MYT1Q01538 1121 aa11.82□□□□□ -0.52
USP8-216ENST00000561206 SPDYE16A6NNV3 312 aaPredicted RBP11.81□□□□□ -0.52
USP8-216ENST00000561206 PRR20EP86478 221 aa11.81□□□□□ -0.52
USP8-216ENST00000561206 PRR20CP86479 221 aa11.81□□□□□ -0.52
USP8-216ENST00000561206 PRR20DP86480 221 aa11.81□□□□□ -0.52
USP8-216ENST00000561206 PRR20BP86481 221 aa11.81□□□□□ -0.52
USP8-216ENST00000561206 PRR20AP86496 221 aa11.81□□□□□ -0.52
USP8-216ENST00000561206 LCE2AQ5TA79 106 aaPredicted RBP11.81□□□□□ -0.52
USP8-216ENST00000561206 HDGFP51858 240 aaKnown RBP11.8□□□□□ -0.52
USP8-216ENST00000561206 EMID1Q96A84 441 aaPredicted RBP11.79□□□□□ -0.52
USP8-216ENST00000561206 ZPR1O75312 459 aa11.78□□□□□ -0.52
USP8-216ENST00000561206 PRIM1P49642 420 aaKnown RBP11.78□□□□□ -0.52
USP8-216ENST00000561206 SLC19A1P41440 591 aa11.76□□□□□ -0.53
USP8-216ENST00000561206 PKDCCQ504Y2 493 aa11.76□□□□□ -0.53
USP8-216ENST00000561206 NUDT18Q6ZVK8 323 aa11.76□□□□□ -0.53
USP8-216ENST00000561206 POTECB2RU33 542 aa11.75□□□□□ -0.53
USP8-216ENST00000561206 COPS2P61201 443 aa11.75□□□□□ -0.53
USP8-216ENST00000561206 TTC13Q8NBP0 860 aa11.75□□□□□ -0.53
USP8-216ENST00000561206 RNF223E7ERA6 249 aa11.74□□□□□ -0.53
USP8-216ENST00000561206 SPRYD7Q5W111 196 aa11.74□□□□□ -0.53
USP8-216ENST00000561206 SLF2Q8IX21 1173 aa11.74□□□□□ -0.53
USP8-216ENST00000561206 RNF40O75150 1001 aa11.73□□□□□ -0.53
USP8-216ENST00000561206 TREML4Q6UXN2 200 aa11.73□□□□□ -0.53
USP8-216ENST00000561206 ZNF598Q86UK7 904 aaKnown RBP11.73□□□□□ -0.53
USP8-216ENST00000561206 ARIH1Q9Y4X5 557 aaPredicted RBP11.71□□□□□ -0.53
USP8-216ENST00000561206 SWT1Q5T5J6 900 aaKnown RBP11.7□□□□□ -0.54
USP8-216ENST00000561206 PRR14Q9BWN1 585 aa11.7□□□□□ -0.54
USP8-216ENST00000561206 ANKLE1Q8NAG6 615 aa11.68□□□□□ -0.54
USP8-216ENST00000561206 CDHR5Q9HBB8 845 aa11.67□□□□□ -0.54
USP8-216ENST00000561206 GDF9O60383 454 aa11.66□□□□□ -0.54
USP8-216ENST00000561206 OSBPP22059 807 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 613.5 ms