RNA–Protein interactions for RNA: ENST00000561174.1

AC009558.1-201, humanhuman

TSL 4 BASIC

Gene AC009558.1, Length 581 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009558.1-201ENST00000561174 PROX2Q3B8N5 592 aa13.19□□□□□ -0.3
AC009558.1-201ENST00000561174 RABGEF1Q9UJ41 708 aa13.19□□□□□ -0.3
AC009558.1-201ENST00000561174 EPAS1Q99814 870 aa13.18□□□□□ -0.3
AC009558.1-201ENST00000561174 C6orf132Q5T0Z8 1188 aa13.14□□□□□ -0.31
AC009558.1-201ENST00000561174 SPRYD3Q8NCJ5 442 aa13.14□□□□□ -0.31
AC009558.1-201ENST00000561174 ANKK1Q8NFD2 765 aa13.12□□□□□ -0.31
AC009558.1-201ENST00000561174 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.12□□□□□ -0.31
AC009558.1-201ENST00000561174 KIAA1468Q9P260 1216 aa13.12□□□□□ -0.31
AC009558.1-201ENST00000561174 DDX12PQ92771 950 aa13.11□□□□□ -0.31
AC009558.1-201ENST00000561174 RBM33Q96EV2 1170 aaKnown RBP13.11□□□□□ -0.31
AC009558.1-201ENST00000561174 ONECUT3O60422 494 aaPredicted RBP13.1□□□□□ -0.31
AC009558.1-201ENST00000561174 IFFO2Q5TF58 517 aa13.1□□□□□ -0.31
AC009558.1-201ENST00000561174 LAPTM4BQ86VI4 370 aa13.1□□□□□ -0.31
AC009558.1-201ENST00000561174 AMER1Q5JTC6 1135 aaPredicted RBP13.07□□□□□ -0.32
AC009558.1-201ENST00000561174 TRIM6-TRIM34B2RNG4 842 aa13.05□□□□□ -0.32
AC009558.1-201ENST00000561174 ZFRQ96KR1 1074 aaKnown RBP13.05□□□□□ -0.32
AC009558.1-201ENST00000561174 SOWAHBA6NEL2 793 aa13.04□□□□□ -0.32
AC009558.1-201ENST00000561174 BCAMP50895 628 aa13.04□□□□□ -0.32
AC009558.1-201ENST00000561174 NBR1Q14596 966 aa13.04□□□□□ -0.32
AC009558.1-201ENST00000561174 PDIA6Q15084 440 aa13.03□□□□□ -0.32
AC009558.1-201ENST00000561174 SEPT9Q9UHD8 586 aaPredicted RBP13.03□□□□□ -0.32
AC009558.1-201ENST00000561174 SPDYE16A6NNV3 312 aaPredicted RBP13.02□□□□□ -0.33
AC009558.1-201ENST00000561174 CFAP44Q96MT7 982 aa13.02□□□□□ -0.33
AC009558.1-201ENST00000561174 MAP3K7O43318 606 aa13.01□□□□□ -0.33
AC009558.1-201ENST00000561174 EN1Q05925 392 aaPredicted RBP13.01□□□□□ -0.33
AC009558.1-201ENST00000561174 E2F4Q16254 413 aa13.01□□□□□ -0.33
AC009558.1-201ENST00000561174 A0A0G2JS52 829 aa13□□□□□ -0.33
AC009558.1-201ENST00000561174 RGS20O76081 388 aa13□□□□□ -0.33
AC009558.1-201ENST00000561174 PAXIP1Q6ZW49 1069 aaPredicted RBP13□□□□□ -0.33
AC009558.1-201ENST00000561174 WDR70Q9NW82 654 aa13□□□□□ -0.33
AC009558.1-201ENST00000561174 TSR1Q2NL82 804 aaKnown RBP12.99□□□□□ -0.33
AC009558.1-201ENST00000561174 FAM98CQ17RN3 349 aaKnown RBP12.98□□□□□ -0.33
AC009558.1-201ENST00000561174 NYAP1Q6ZVC0 841 aa12.97□□□□□ -0.33
AC009558.1-201ENST00000561174 PACS2Q86VP3 889 aa12.97□□□□□ -0.33
AC009558.1-201ENST00000561174 RTN4Q9NQC3 1192 aaKnown RBP12.97□□□□□ -0.33
AC009558.1-201ENST00000561174 WBP1LQ9NX94 342 aa12.95□□□□□ -0.34
AC009558.1-201ENST00000561174 ITGBL1O95965 494 aaPredicted RBP12.94□□□□□ -0.34
AC009558.1-201ENST00000561174 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.94□□□□□ -0.34
AC009558.1-201ENST00000561174 TSKSQ9UJT2 592 aa12.94□□□□□ -0.34
AC009558.1-201ENST00000561174 LRCH3Q96II8 777 aa12.93□□□□□ -0.34
AC009558.1-201ENST00000561174 ARIH1Q9Y4X5 557 aaPredicted RBP12.93□□□□□ -0.34
AC009558.1-201ENST00000561174 GRXCR2A6NFK2 248 aa12.92□□□□□ -0.34
AC009558.1-201ENST00000561174 TSR3Q9UJK0 312 aaKnown RBP12.91□□□□□ -0.34
AC009558.1-201ENST00000561174 HPS5Q9UPZ3 1129 aa12.9□□□□□ -0.34
AC009558.1-201ENST00000561174 CDCA7LQ96GN5 454 aa12.89□□□□□ -0.35
AC009558.1-201ENST00000561174 PRSS12P56730 875 aa12.88□□□□□ -0.35
AC009558.1-201ENST00000561174 CERKQ8TCT0 537 aa12.88□□□□□ -0.35
AC009558.1-201ENST00000561174 PRIM1P49642 420 aaKnown RBP12.87□□□□□ -0.35
AC009558.1-201ENST00000561174 KCNC4Q03721 635 aa12.87□□□□□ -0.35
AC009558.1-201ENST00000561174 IRX2Q9BZI1 471 aaPredicted RBP12.86□□□□□ -0.35
AC009558.1-201ENST00000561174 SMAPO00193 183 aa12.84□□□□□ -0.35
AC009558.1-201ENST00000561174 OSBPP22059 807 aa12.83□□□□□ -0.36
AC009558.1-201ENST00000561174 PPP4CP60510 307 aa12.83□□□□□ -0.36
AC009558.1-201ENST00000561174 FAM198AQ9UFP1 575 aa12.83□□□□□ -0.36
AC009558.1-201ENST00000561174 SAMD7Q7Z3H4 446 aa12.81□□□□□ -0.36
AC009558.1-201ENST00000561174 TATDN2Q93075 761 aa12.81□□□□□ -0.36
AC009558.1-201ENST00000561174 PNMA3Q9UL41 463 aa12.81□□□□□ -0.36
AC009558.1-201ENST00000561174 NBPF26B4DH59 902 aa12.8□□□□□ -0.36
AC009558.1-201ENST00000561174 CDHR5Q9HBB8 845 aa12.79□□□□□ -0.36
AC009558.1-201ENST00000561174 C3orf80F5H4A9 247 aa12.77□□□□□ -0.37
AC009558.1-201ENST00000561174 NUDT18Q6ZVK8 323 aa12.75□□□□□ -0.37
AC009558.1-201ENST00000561174 HDGFP51858 240 aaKnown RBP12.74□□□□□ -0.37
AC009558.1-201ENST00000561174 RBM27Q9P2N5 1060 aaKnown RBP12.74□□□□□ -0.37
AC009558.1-201ENST00000561174 RNF40O75150 1001 aa12.7□□□□□ -0.38
AC009558.1-201ENST00000561174 TJAP1Q5JTD0 557 aa12.69□□□□□ -0.38
AC009558.1-201ENST00000561174 PADI6Q6TGC4 694 aa12.68□□□□□ -0.38
AC009558.1-201ENST00000561174 NPDC1Q9NQX5 325 aaPredicted RBP12.68□□□□□ -0.38
AC009558.1-201ENST00000561174 TTC13Q8NBP0 860 aa12.67□□□□□ -0.38
AC009558.1-201ENST00000561174 ARHGEF1Q92888 912 aaKnown RBP12.66□□□□□ -0.38
AC009558.1-201ENST00000561174 MTRQ99707 1265 aa12.66□□□□□ -0.38
AC009558.1-201ENST00000561174 IL21Q9HBE4 155 aa12.66□□□□□ -0.38
AC009558.1-201ENST00000561174 TSHZ2Q9NRE2 1034 aa12.66□□□□□ -0.38
AC009558.1-201ENST00000561174 NECTIN2Q92692 538 aa12.63□□□□□ -0.39
AC009558.1-201ENST00000561174 MLLT3P42568 568 aaPredicted RBP12.62□□□□□ -0.39
AC009558.1-201ENST00000561174 SWT1Q5T5J6 900 aaKnown RBP12.62□□□□□ -0.39
AC009558.1-201ENST00000561174 APLP1P51693 650 aa12.61□□□□□ -0.39
AC009558.1-201ENST00000561174 Q6ZNB5 142 aa12.6□□□□□ -0.39
AC009558.1-201ENST00000561174 SLF2Q8IX21 1173 aa12.6□□□□□ -0.39
AC009558.1-201ENST00000561174 KCNV2Q8TDN2 545 aa12.59□□□□□ -0.39
AC009558.1-201ENST00000561174 SLC4A3P48751 1232 aa12.58□□□□□ -0.4
AC009558.1-201ENST00000561174 ZNF516Q92618 1163 aa12.58□□□□□ -0.4
AC009558.1-201ENST00000561174 EYA1Q99502 592 aa12.58□□□□□ -0.4
AC009558.1-201ENST00000561174 PPP1R18Q6NYC8 613 aa12.57□□□□□ -0.4
AC009558.1-201ENST00000561174 LAPTM4AQ15012 233 aa12.55□□□□□ -0.4
AC009558.1-201ENST00000561174 PRKD2Q9BZL6 878 aa12.55□□□□□ -0.4
AC009558.1-201ENST00000561174 COPS2P61201 443 aa12.53□□□□□ -0.4
AC009558.1-201ENST00000561174 PTGDRQ13258 359 aa12.53□□□□□ -0.4
AC009558.1-201ENST00000561174 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.53□□□□□ -0.4
AC009558.1-201ENST00000561174 GFRA3O60609 400 aa12.51□□□□□ -0.41
AC009558.1-201ENST00000561174 NKX2-3Q8TAU0 364 aa12.51□□□□□ -0.41
AC009558.1-201ENST00000561174 RBM46Q8TBY0 533 aaKnown RBP12.49□□□□□ -0.41
AC009558.1-201ENST00000561174 PRR14Q9BWN1 585 aa12.49□□□□□ -0.41
AC009558.1-201ENST00000561174 NUTM2FA1L443 756 aa12.48□□□□□ -0.41
AC009558.1-201ENST00000561174 DNAJB2P25686 324 aa12.48□□□□□ -0.41
AC009558.1-201ENST00000561174 V9GY48 417 aaPredicted RBP12.48□□□□□ -0.41
AC009558.1-201ENST00000561174 GGCXP38435 758 aa12.47□□□□□ -0.41
AC009558.1-201ENST00000561174 P3H3Q8IVL6 736 aa12.47□□□□□ -0.41
AC009558.1-201ENST00000561174 ZPR1O75312 459 aa12.45□□□□□ -0.42
AC009558.1-201ENST00000561174 PCDHB3Q9Y5E6 796 aa12.45□□□□□ -0.42
AC009558.1-201ENST00000561174 ADGRG1Q9Y653 693 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms