RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 UNC13BO14795 1591 aa20.03■□□□□ 0.8
CRTC3-210ENST00000560927 ZBED9Q6R2W3 1325 aa20.02■□□□□ 0.8
CRTC3-210ENST00000560927 CCDC144AA2RUR9 1427 aa20.02■□□□□ 0.8
CRTC3-210ENST00000560927 PLA2R1Q13018 1463 aa20.02■□□□□ 0.79
CRTC3-210ENST00000560927 PLEKHH2Q8IVE3 1493 aa20.02■□□□□ 0.79
CRTC3-210ENST00000560927 PLXNC1O60486 1568 aa20■□□□□ 0.79
CRTC3-210ENST00000560927 ROCK2O75116 1388 aaKnown RBP20■□□□□ 0.79
CRTC3-210ENST00000560927 RGL3Q3MIN7 710 aa19.99■□□□□ 0.79
CRTC3-210ENST00000560927 ZCCHC11Q5TAX3 1644 aaKnown RBP19.99■□□□□ 0.79
CRTC3-210ENST00000560927 CLASP1Q7Z460 1538 aa19.98■□□□□ 0.79
CRTC3-210ENST00000560927 PLCH2O75038 1416 aa19.98■□□□□ 0.79
CRTC3-210ENST00000560927 PRAG1Q86YV5 1406 aa19.97■□□□□ 0.79
CRTC3-210ENST00000560927 IQGAP3Q86VI3 1631 aa19.96■□□□□ 0.79
CRTC3-210ENST00000560927 DUOX2Q9NRD8 1548 aa19.95■□□□□ 0.78
CRTC3-210ENST00000560927 NBPF1Q3BBV0 1214 aa19.94■□□□□ 0.78
CRTC3-210ENST00000560927 TRPM1Q7Z4N2 1603 aa19.94■□□□□ 0.78
CRTC3-210ENST00000560927 A2MP01023 1474 aa19.94■□□□□ 0.78
CRTC3-210ENST00000560927 UHRF1BP1LA0JNW5 1464 aa19.93■□□□□ 0.78
CRTC3-210ENST00000560927 EFCAB2Q5VUJ9 269 aa19.93■□□□□ 0.78
CRTC3-210ENST00000560927 TRAPPC8Q9Y2L5 1435 aa19.92■□□□□ 0.78
CRTC3-210ENST00000560927 ERBINQ96RT1 1412 aa19.91■□□□□ 0.78
CRTC3-210ENST00000560927 MAGI2Q86UL8 1455 aa19.91■□□□□ 0.78
CRTC3-210ENST00000560927 ABCC1P33527 1531 aa19.91■□□□□ 0.78
CRTC3-210ENST00000560927 PNISRQ8TF01 805 aaKnown RBP19.88■□□□□ 0.77
CRTC3-210ENST00000560927 SENP3-EIF4A1A0A087X0R7 540 aa19.87■□□□□ 0.77
CRTC3-210ENST00000560927 E9PCH4 1651 aa19.87■□□□□ 0.77
CRTC3-210ENST00000560927 GPRASP1Q5JY77 1395 aa19.87■□□□□ 0.77
CRTC3-210ENST00000560927 ATP10AO60312 1499 aa19.86■□□□□ 0.77
CRTC3-210ENST00000560927 TMC1Q8TDI8 760 aa19.86■□□□□ 0.77
CRTC3-210ENST00000560927 RBM19Q9Y4C8 960 aaKnown RBP19.86■□□□□ 0.77
CRTC3-210ENST00000560927 AFAP1Q8N556 730 aa19.85■□□□□ 0.77
CRTC3-210ENST00000560927 ERICH6BQ5W0A0 696 aa19.84■□□□□ 0.77
CRTC3-210ENST00000560927 SMG6Q86US8 1419 aaKnown RBP19.82■□□□□ 0.76
CRTC3-210ENST00000560927 PPP4R2Q9NY27 417 aa19.82■□□□□ 0.76
CRTC3-210ENST00000560927 SPAG9O60271 1321 aaKnown RBP19.82■□□□□ 0.76
CRTC3-210ENST00000560927 PRDM15P57071 1507 aaPredicted RBP19.82■□□□□ 0.76
CRTC3-210ENST00000560927 MYBBP1AQ9BQG0 1328 aaKnown RBP19.81■□□□□ 0.76
CRTC3-210ENST00000560927 TESK2Q96S53 571 aa19.81■□□□□ 0.76
CRTC3-210ENST00000560927 RALBP1Q15311 655 aa19.8■□□□□ 0.76
CRTC3-210ENST00000560927 DISP3Q9P2K9 1392 aa19.8■□□□□ 0.76
CRTC3-210ENST00000560927 LAMC1P11047 1609 aa19.8■□□□□ 0.76
CRTC3-210ENST00000560927 ZFYVE16Q7Z3T8 1539 aa19.79■□□□□ 0.76
CRTC3-210ENST00000560927 BRD4O60885 1362 aaPredicted RBP19.79■□□□□ 0.76
CRTC3-210ENST00000560927 KTN1Q86UP2 1357 aaKnown RBP19.79■□□□□ 0.76
CRTC3-210ENST00000560927 COL17A1Q9UMD9 1497 aaPredicted RBP19.78■□□□□ 0.76
CRTC3-210ENST00000560927 NUDCQ9Y266 331 aa19.78■□□□□ 0.76
CRTC3-210ENST00000560927 LRPPRCP42704 1394 aaKnown RBP19.78■□□□□ 0.76
CRTC3-210ENST00000560927 EIF2AK4Q9P2K8 1649 aaKnown RBP19.78■□□□□ 0.76
CRTC3-210ENST00000560927 PER1O15534 1290 aaPredicted RBP19.77■□□□□ 0.76
CRTC3-210ENST00000560927 RTEL1-TNFRSF6BF6WH68 1400 aa19.77■□□□□ 0.76
CRTC3-210ENST00000560927 ARAP3Q8WWN8 1544 aa19.76■□□□□ 0.75
CRTC3-210ENST00000560927 WDR7Q9Y4E6 1490 aa19.76■□□□□ 0.75
CRTC3-210ENST00000560927 B4GALNT3Q6L9W6 998 aa19.76■□□□□ 0.75
CRTC3-210ENST00000560927 PARD3Q8TEW0 1356 aa19.75■□□□□ 0.75
CRTC3-210ENST00000560927 MYT1Q01538 1121 aa19.74■□□□□ 0.75
CRTC3-210ENST00000560927 FANCAO15360 1455 aa19.73■□□□□ 0.75
CRTC3-210ENST00000560927 RNF17Q9BXT8 1623 aaKnown RBP19.72■□□□□ 0.75
CRTC3-210ENST00000560927 NLRP13Q86W25 1043 aa19.71■□□□□ 0.75
CRTC3-210ENST00000560927 TRPM2O94759 1503 aa19.7■□□□□ 0.74
CRTC3-210ENST00000560927 ABCA9Q8IUA7 1624 aa19.7■□□□□ 0.74
CRTC3-210ENST00000560927 RNF123Q5XPI4 1314 aa19.7■□□□□ 0.74
CRTC3-210ENST00000560927 PANK3Q9H999 370 aa19.7■□□□□ 0.74
CRTC3-210ENST00000560927 DEPDC5O75140 1603 aa19.7■□□□□ 0.74
CRTC3-210ENST00000560927 ATP7AQ04656 1500 aa19.7■□□□□ 0.74
CRTC3-210ENST00000560927 TMF1P82094 1093 aa19.69■□□□□ 0.74
CRTC3-210ENST00000560927 CC2D1BQ5T0F9 858 aaKnown RBP19.69■□□□□ 0.74
CRTC3-210ENST00000560927 MADDQ8WXG6 1647 aa19.69■□□□□ 0.74
CRTC3-210ENST00000560927 PTPRTO14522 1441 aa19.69■□□□□ 0.74
CRTC3-210ENST00000560927 INO80Q9ULG1 1556 aaPredicted RBP19.68■□□□□ 0.74
CRTC3-210ENST00000560927 CLTCL1P53675 1640 aa19.68■□□□□ 0.74
CRTC3-210ENST00000560927 SPHKAPQ2M3C7 1700 aa19.67■□□□□ 0.74
CRTC3-210ENST00000560927 SCAPERQ9BY12 1400 aa19.67■□□□□ 0.74
CRTC3-210ENST00000560927 MYT1LQ9UL68 1186 aa19.66■□□□□ 0.74
CRTC3-210ENST00000560927 ADGRL1O94910 1474 aa19.66■□□□□ 0.74
CRTC3-210ENST00000560927 KIF3BO15066 747 aa19.66■□□□□ 0.74
CRTC3-210ENST00000560927 CEP152O94986 1710 aa19.65■□□□□ 0.74
CRTC3-210ENST00000560927 TET3O43151 1660 aa19.65■□□□□ 0.74
CRTC3-210ENST00000560927 WASHC2CQ9Y4E1 1318 aa19.64■□□□□ 0.73
CRTC3-210ENST00000560927 ASXL2Q76L83 1435 aa19.64■□□□□ 0.73
CRTC3-210ENST00000560927 SALL2Q9Y467 1007 aaPredicted RBP19.64■□□□□ 0.73
CRTC3-210ENST00000560927 VWDEQ8N2E2 1590 aa19.63■□□□□ 0.73
CRTC3-210ENST00000560927 ANP32EQ9BTT0 268 aa19.63■□□□□ 0.73
CRTC3-210ENST00000560927 KANK1Q14678 1352 aa19.62■□□□□ 0.73
CRTC3-210ENST00000560927 IQGAP1P46940 1657 aa19.62■□□□□ 0.73
CRTC3-210ENST00000560927 MROH1Q8NDA8 1641 aa19.6■□□□□ 0.73
CRTC3-210ENST00000560927 SCAF11Q99590 1463 aaKnown RBP19.58■□□□□ 0.73
CRTC3-210ENST00000560927 UGGT1Q9NYU2 1555 aa19.58■□□□□ 0.73
CRTC3-210ENST00000560927 MSH5O43196 834 aa19.56■□□□□ 0.72
CRTC3-210ENST00000560927 STAC3Q96MF2 364 aa19.56■□□□□ 0.72
CRTC3-210ENST00000560927 KIDINS220Q9ULH0 1771 aa19.54■□□□□ 0.72
CRTC3-210ENST00000560927 CCDC136Q96JN2 1154 aa19.54■□□□□ 0.72
CRTC3-210ENST00000560927 FANCIQ9NVI1 1328 aa19.54■□□□□ 0.72
CRTC3-210ENST00000560927 CDCA7LQ96GN5 454 aa19.53■□□□□ 0.72
CRTC3-210ENST00000560927 BLMP54132 1417 aaPredicted RBP19.53■□□□□ 0.72
CRTC3-210ENST00000560927 KNSTRNQ9Y448 316 aa19.52■□□□□ 0.72
CRTC3-210ENST00000560927 RRP1P56182 461 aaKnown RBP19.51■□□□□ 0.71
CRTC3-210ENST00000560927 CFAP70Q5T0N1 1121 aa19.51■□□□□ 0.71
CRTC3-210ENST00000560927 RCAN3Q9UKA8 241 aa19.51■□□□□ 0.71
CRTC3-210ENST00000560927 EFCAB6Q5THR3 1501 aa19.51■□□□□ 0.71
CRTC3-210ENST00000560927 AMER1Q5JTC6 1135 aaPredicted RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms