RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	TYW1B	Q6NUM6	668 aa		12.23	□□□□□ -0.45
SLTM-223	ENST00000560532	ITGBL1	O95965	494 aa	Predicted RBP	12.21	□□□□□ -0.45
SLTM-223	ENST00000560532	FBXW7	Q969H0	707 aa		12.21	□□□□□ -0.45
SLTM-223	ENST00000560532	SOWAHB	A6NEL2	793 aa		12.2	□□□□□ -0.46
SLTM-223	ENST00000560532	PHF14	O94880	888 aa		12.2	□□□□□ -0.46
SLTM-223	ENST00000560532	KIAA1468	Q9P260	1216 aa		12.2	□□□□□ -0.46
SLTM-223	ENST00000560532	SEPT9	Q9UHD8	586 aa	Predicted RBP	12.19	□□□□□ -0.46
SLTM-223	ENST00000560532	DCAF8L2	P0C7V8	631 aa		12.18	□□□□□ -0.46
SLTM-223	ENST00000560532	CADPS2	Q86UW7	1296 aa		12.18	□□□□□ -0.46
SLTM-223	ENST00000560532	LAPTM4B	Q86VI4	370 aa		12.18	□□□□□ -0.46
SLTM-223	ENST00000560532	ZFR	Q96KR1	1074 aa	Known RBP	12.18	□□□□□ -0.46
SLTM-223	ENST00000560532	WBP1L	Q9NX94	342 aa		12.17	□□□□□ -0.46
SLTM-223	ENST00000560532	C6orf132	Q5T0Z8	1188 aa		12.14	□□□□□ -0.47
SLTM-223	ENST00000560532	RBM33	Q96EV2	1170 aa	Known RBP	12.13	□□□□□ -0.47
SLTM-223	ENST00000560532	DPYSL4	O14531	572 aa		12.12	□□□□□ -0.47
SLTM-223	ENST00000560532		Q6ZNB5	142 aa		12.12	□□□□□ -0.47
SLTM-223	ENST00000560532	NYAP1	Q6ZVC0	841 aa		12.12	□□□□□ -0.47
SLTM-223	ENST00000560532	KCNC4	Q03721	635 aa		12.11	□□□□□ -0.47
SLTM-223	ENST00000560532	EPAS1	Q99814	870 aa		12.11	□□□□□ -0.47
SLTM-223	ENST00000560532	TRIM6-TRIM34	B2RNG4	842 aa		12.1	□□□□□ -0.47
SLTM-223	ENST00000560532	ONECUT3	O60422	494 aa	Predicted RBP	12.09	□□□□□ -0.47
SLTM-223	ENST00000560532	DDX12P	Q92771	950 aa		12.08	□□□□□ -0.48
SLTM-223	ENST00000560532	HPS5	Q9UPZ3	1129 aa		12.08	□□□□□ -0.48
SLTM-223	ENST00000560532	FAM98C	Q17RN3	349 aa	Known RBP	12.07	□□□□□ -0.48
SLTM-223	ENST00000560532	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	12.07	□□□□□ -0.48
SLTM-223	ENST00000560532	LRCH3	Q96II8	777 aa		12.06	□□□□□ -0.48
SLTM-223	ENST00000560532	CAMK2B	Q13554	666 aa		12.05	□□□□□ -0.48
SLTM-223	ENST00000560532	TSR3	Q9UJK0	312 aa	Known RBP	12.05	□□□□□ -0.48
SLTM-223	ENST00000560532	NBR1	Q14596	966 aa		12	□□□□□ -0.49
SLTM-223	ENST00000560532	TSR1	Q2NL82	804 aa	Known RBP	12	□□□□□ -0.49
SLTM-223	ENST00000560532	MAP3K7	O43318	606 aa		11.99	□□□□□ -0.49
SLTM-223	ENST00000560532	TSKS	Q9UJT2	592 aa		11.99	□□□□□ -0.49
SLTM-223	ENST00000560532	EN1	Q05925	392 aa	Predicted RBP	11.97	□□□□□ -0.49
SLTM-223	ENST00000560532	PACS2	Q86VP3	889 aa		11.97	□□□□□ -0.49
SLTM-223	ENST00000560532	SMAP	O00193	183 aa		11.95	□□□□□ -0.5
SLTM-223	ENST00000560532	PPP4C	P60510	307 aa		11.95	□□□□□ -0.5
SLTM-223	ENST00000560532	GFRA3	O60609	400 aa		11.92	□□□□□ -0.5
SLTM-223	ENST00000560532	SAMD7	Q7Z3H4	446 aa		11.92	□□□□□ -0.5
SLTM-223	ENST00000560532	LAPTM4A	Q15012	233 aa		11.91	□□□□□ -0.5
SLTM-223	ENST00000560532	LCE2B	O14633	110 aa		11.9	□□□□□ -0.5
SLTM-223	ENST00000560532	PDIA6	Q15084	440 aa		11.9	□□□□□ -0.5
SLTM-223	ENST00000560532	TJAP1	Q5JTD0	557 aa		11.89	□□□□□ -0.51
SLTM-223	ENST00000560532	CDCA7L	Q96GN5	454 aa		11.89	□□□□□ -0.51
SLTM-223	ENST00000560532	PRKD2	Q9BZL6	878 aa		11.88	□□□□□ -0.51
SLTM-223	ENST00000560532	FAM198A	Q9UFP1	575 aa		11.88	□□□□□ -0.51
SLTM-223	ENST00000560532	MTR	Q99707	1265 aa		11.87	□□□□□ -0.51
SLTM-223	ENST00000560532	C3orf80	F5H4A9	247 aa		11.86	□□□□□ -0.51
SLTM-223	ENST00000560532	PRSS12	P56730	875 aa		11.86	□□□□□ -0.51
SLTM-223	ENST00000560532	TRAF7	Q6Q0C0	670 aa		11.86	□□□□□ -0.51
SLTM-223	ENST00000560532	RNF40	O75150	1001 aa		11.85	□□□□□ -0.51
SLTM-223	ENST00000560532	PNMA3	Q9UL41	463 aa		11.85	□□□□□ -0.51
SLTM-223	ENST00000560532	PRIM1	P49642	420 aa	Known RBP	11.84	□□□□□ -0.51
SLTM-223	ENST00000560532	PPP1R18	Q6NYC8	613 aa		11.83	□□□□□ -0.52
SLTM-223	ENST00000560532	IL21	Q9HBE4	155 aa		11.83	□□□□□ -0.52
SLTM-223	ENST00000560532	GRXCR2	A6NFK2	248 aa		11.82	□□□□□ -0.52
SLTM-223	ENST00000560532	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.82	□□□□□ -0.52
SLTM-223	ENST00000560532	NBPF26	B4DH59	902 aa		11.82	□□□□□ -0.52
SLTM-223	ENST00000560532	TATDN2	Q93075	761 aa		11.82	□□□□□ -0.52
SLTM-223	ENST00000560532	ZNF516	Q92618	1163 aa		11.81	□□□□□ -0.52
SLTM-223	ENST00000560532	NRG2	O14511	850 aa	Predicted RBP	11.79	□□□□□ -0.52
SLTM-223	ENST00000560532	CERK	Q8TCT0	537 aa		11.79	□□□□□ -0.52
SLTM-223	ENST00000560532	CDHR5	Q9HBB8	845 aa		11.79	□□□□□ -0.52
SLTM-223	ENST00000560532	NUDT18	Q6ZVK8	323 aa		11.77	□□□□□ -0.53
SLTM-223	ENST00000560532	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.77	□□□□□ -0.53
SLTM-223	ENST00000560532	APLP1	P51693	650 aa		11.76	□□□□□ -0.53
SLTM-223	ENST00000560532	NKX2-3	Q8TAU0	364 aa		11.75	□□□□□ -0.53
SLTM-223	ENST00000560532	BBX	Q8WY36	941 aa	Predicted RBP	11.75	□□□□□ -0.53
SLTM-223	ENST00000560532		V9GY48	417 aa	Predicted RBP	11.75	□□□□□ -0.53
SLTM-223	ENST00000560532	HDGF	P51858	240 aa	Known RBP	11.74	□□□□□ -0.53
SLTM-223	ENST00000560532	E2F4	Q16254	413 aa		11.74	□□□□□ -0.53
SLTM-223	ENST00000560532	COPS2	P61201	443 aa		11.72	□□□□□ -0.53
SLTM-223	ENST00000560532	OSBP	P22059	807 aa		11.7	□□□□□ -0.54
SLTM-223	ENST00000560532	PDZRN3	Q9UPQ7	1066 aa		11.7	□□□□□ -0.54
SLTM-223	ENST00000560532	SWT1	Q5T5J6	900 aa	Known RBP	11.69	□□□□□ -0.54
SLTM-223	ENST00000560532	RBM27	Q9P2N5	1060 aa	Known RBP	11.68	□□□□□ -0.54
SLTM-223	ENST00000560532	PADI6	Q6TGC4	694 aa		11.67	□□□□□ -0.54
SLTM-223	ENST00000560532	SPRYD3	Q8NCJ5	442 aa		11.67	□□□□□ -0.54
SLTM-223	ENST00000560532	GGCX	P38435	758 aa		11.66	□□□□□ -0.54
SLTM-223	ENST00000560532	WDR70	Q9NW82	654 aa		11.66	□□□□□ -0.54
SLTM-223	ENST00000560532	ZNF787	Q6DD87	383 aa		11.65	□□□□□ -0.54
SLTM-223	ENST00000560532	SLF2	Q8IX21	1173 aa		11.65	□□□□□ -0.54
SLTM-223	ENST00000560532	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.65	□□□□□ -0.54
SLTM-223	ENST00000560532	NECTIN2	Q92692	538 aa		11.63	□□□□□ -0.55
SLTM-223	ENST00000560532	TTC13	Q8NBP0	860 aa		11.62	□□□□□ -0.55
SLTM-223	ENST00000560532	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.61	□□□□□ -0.55
SLTM-223	ENST00000560532	ZPR1	O75312	459 aa		11.6	□□□□□ -0.55
SLTM-223	ENST00000560532	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.59	□□□□□ -0.55
SLTM-223	ENST00000560532	SLC4A3	P48751	1232 aa		11.58	□□□□□ -0.56
SLTM-223	ENST00000560532	CFAP44	Q96MT7	982 aa		11.57	□□□□□ -0.56
SLTM-223	ENST00000560532	TMUB1	Q9BVT8	246 aa		11.57	□□□□□ -0.56
SLTM-223	ENST00000560532	PCDHB3	Q9Y5E6	796 aa		11.57	□□□□□ -0.56
SLTM-223	ENST00000560532	BLOC1S3	Q6QNY0	202 aa		11.55	□□□□□ -0.56
SLTM-223	ENST00000560532	EYA1	Q99502	592 aa		11.55	□□□□□ -0.56
SLTM-223	ENST00000560532	RNF223	E7ERA6	249 aa		11.54	□□□□□ -0.56
SLTM-223	ENST00000560532	TLL1	O43897	1013 aa		11.54	□□□□□ -0.56
SLTM-223	ENST00000560532	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.54	□□□□□ -0.56
SLTM-223	ENST00000560532	SLC19A1	P41440	591 aa		11.53	□□□□□ -0.56
SLTM-223	ENST00000560532	TRIM67	Q6ZTA4	783 aa		11.53	□□□□□ -0.56
SLTM-223	ENST00000560532	ZNF775	Q96BV0	537 aa	Predicted RBP	11.53	□□□□□ -0.56
SLTM-223	ENST00000560532	PRR14	Q9BWN1	585 aa		11.52	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms