RNA–Protein interactions for RNA: ENST00000560498.5

HMG20A-210, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 631 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-210ENST00000560498 PTPRKQ15262 1439 aa26.14■■□□□ 1.78
HMG20A-210ENST00000560498 MIA2Q96PC5 1412 aa26.14■■□□□ 1.77
HMG20A-210ENST00000560498 NCOA1Q15788 1441 aa26.09■■□□□ 1.77
HMG20A-210ENST00000560498 UBAP1LF5GYI3 381 aa26.07■■□□□ 1.76
HMG20A-210ENST00000560498 FBXO31Q5XUX0 539 aaPredicted RBP26.06■■□□□ 1.76
HMG20A-210ENST00000560498 MAST1Q9Y2H9 1570 aa26.05■■□□□ 1.76
HMG20A-210ENST00000560498 WASHC2CQ9Y4E1 1318 aa26.05■■□□□ 1.76
HMG20A-210ENST00000560498 CAMSAP1Q5T5Y3 1602 aa26.03■■□□□ 1.76
HMG20A-210ENST00000560498 ZNF335Q9H4Z2 1342 aaPredicted RBP26.02■■□□□ 1.76
HMG20A-210ENST00000560498 NCKAP5LQ9HCH0 1330 aa26.02■■□□□ 1.76
HMG20A-210ENST00000560498 MYO3AQ8NEV4 1616 aa26.01■■□□□ 1.75
HMG20A-210ENST00000560498 KDM5DQ9BY66 1539 aa26■■□□□ 1.75
HMG20A-210ENST00000560498 ABCC5O15440 1437 aa25.99■■□□□ 1.75
HMG20A-210ENST00000560498 CEP170BQ9Y4F5 1589 aaPredicted RBP25.98■■□□□ 1.75
HMG20A-210ENST00000560498 PZPP20742 1482 aa25.97■■□□□ 1.75
HMG20A-210ENST00000560498 PTPN23Q9H3S7 1636 aa25.96■■□□□ 1.75
HMG20A-210ENST00000560498 ZNF142P52746 1687 aaPredicted RBP25.96■■□□□ 1.75
HMG20A-210ENST00000560498 FGD6Q6ZV73 1430 aa25.96■■□□□ 1.75
HMG20A-210ENST00000560498 TNRQ92752 1358 aa25.95■■□□□ 1.75
HMG20A-210ENST00000560498 FAM135AQ9P2D6 1515 aa25.95■■□□□ 1.74
HMG20A-210ENST00000560498 RRP7BPQ9NSQ0 103 aa25.94■■□□□ 1.74
HMG20A-210ENST00000560498 A2ML1A8K2U0 1454 aa25.93■■□□□ 1.74
HMG20A-210ENST00000560498 TCOF1Q13428 1488 aaKnown RBP25.92■■□□□ 1.74
HMG20A-210ENST00000560498 PKD2Q13563 968 aa25.92■■□□□ 1.74
HMG20A-210ENST00000560498 RNF17Q9BXT8 1623 aaKnown RBP25.92■■□□□ 1.74
HMG20A-210ENST00000560498 PLA2R1Q13018 1463 aa25.91■■□□□ 1.74
HMG20A-210ENST00000560498 DAPK1P53355 1430 aa25.91■■□□□ 1.74
HMG20A-210ENST00000560498 KIF15Q9NS87 1388 aa25.91■■□□□ 1.74
HMG20A-210ENST00000560498 MED1Q15648 1581 aaPredicted RBP25.9■■□□□ 1.74
HMG20A-210ENST00000560498 DUOX2Q9NRD8 1548 aa25.9■■□□□ 1.74
HMG20A-210ENST00000560498 ABCC3O15438 1527 aa25.89■■□□□ 1.74
HMG20A-210ENST00000560498 DNMT1P26358 1616 aaKnown RBP25.89■■□□□ 1.74
HMG20A-210ENST00000560498 CHIC2Q9UKJ5 165 aa25.89■■□□□ 1.74
HMG20A-210ENST00000560498 SHANK2Q9UPX8 1470 aa25.89■■□□□ 1.73
HMG20A-210ENST00000560498 MROH1Q8NDA8 1641 aa25.88■■□□□ 1.73
HMG20A-210ENST00000560498 EIF2AK4Q9P2K8 1649 aaKnown RBP25.88■■□□□ 1.73
HMG20A-210ENST00000560498 HSPA1LP34931 641 aa25.87■■□□□ 1.73
HMG20A-210ENST00000560498 SCAF1Q9H7N4 1312 aaKnown RBP25.86■■□□□ 1.73
HMG20A-210ENST00000560498 CROCC2H7BZ55 1655 aa25.85■■□□□ 1.73
HMG20A-210ENST00000560498 PIP4K2BP78356 416 aa25.82■■□□□ 1.72
HMG20A-210ENST00000560498 ERBINQ96RT1 1412 aa25.81■■□□□ 1.72
HMG20A-210ENST00000560498 FAM50AQ14320 339 aaKnown RBP25.81■■□□□ 1.72
HMG20A-210ENST00000560498 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.81■■□□□ 1.72
HMG20A-210ENST00000560498 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.81■■□□□ 1.72
HMG20A-210ENST00000560498 ZC3H13Q5T200 1668 aaKnown RBP25.8■■□□□ 1.72
HMG20A-210ENST00000560498 ANKRD30AQ9BXX3 1397 aa25.8■■□□□ 1.72
HMG20A-210ENST00000560498 NLRP1Q9C000 1473 aa25.79■■□□□ 1.72
HMG20A-210ENST00000560498 THEMISQ8N1K5 641 aaPredicted RBP25.79■■□□□ 1.72
HMG20A-210ENST00000560498 ERVK-7P63135 1459 aa25.78■■□□□ 1.72
HMG20A-210ENST00000560498 CEP152O94986 1710 aa25.77■■□□□ 1.72
HMG20A-210ENST00000560498 UGGT1Q9NYU2 1555 aa25.76■■□□□ 1.71
HMG20A-210ENST00000560498 ANKLE2Q86XL3 938 aa25.75■■□□□ 1.71
HMG20A-210ENST00000560498 PRDM15P57071 1507 aaPredicted RBP25.74■■□□□ 1.71
HMG20A-210ENST00000560498 PHF23Q9BUL5 403 aaPredicted RBP25.73■■□□□ 1.71
HMG20A-210ENST00000560498 NEURL4Q96JN8 1562 aa25.73■■□□□ 1.71
HMG20A-210ENST00000560498 TOM1O60784 492 aa25.71■■□□□ 1.71
HMG20A-210ENST00000560498 PPARGC1BQ86YN6 1023 aaKnown RBP25.71■■□□□ 1.71
HMG20A-210ENST00000560498 ARHGAP31Q2M1Z3 1444 aa25.71■■□□□ 1.71
HMG20A-210ENST00000560498 ADGRL2O95490 1459 aa25.7■■□□□ 1.7
HMG20A-210ENST00000560498 CFAP65Q6ZU64 1925 aaKnown RBP25.7■■□□□ 1.7
HMG20A-210ENST00000560498 DEPDC5O75140 1603 aa25.69■■□□□ 1.7
HMG20A-210ENST00000560498 KANK1Q14678 1352 aa25.69■■□□□ 1.7
HMG20A-210ENST00000560498 POLR1AO95602 1720 aaPredicted RBP25.67■■□□□ 1.7
HMG20A-210ENST00000560498 NPHP4O75161 1426 aaPredicted RBP25.65■■□□□ 1.7
HMG20A-210ENST00000560498 MED14O60244 1454 aa25.64■■□□□ 1.69
HMG20A-210ENST00000560498 VWDEQ8N2E2 1590 aa25.63■■□□□ 1.69
HMG20A-210ENST00000560498 LMTK2Q8IWU2 1503 aa25.62■■□□□ 1.69
HMG20A-210ENST00000560498 ANKRD50Q9ULJ7 1429 aa25.62■■□□□ 1.69
HMG20A-210ENST00000560498 CPS1P31327 1500 aa25.61■■□□□ 1.69
HMG20A-210ENST00000560498 UBR1Q8IWV7 1749 aa25.59■■□□□ 1.69
HMG20A-210ENST00000560498 LTKP29376 864 aa25.58■■□□□ 1.69
HMG20A-210ENST00000560498 SENP3Q9H4L4 574 aaPredicted RBP25.58■■□□□ 1.69
HMG20A-210ENST00000560498 IDI1Q13907 227 aa25.57■■□□□ 1.68
HMG20A-210ENST00000560498 TXNDC2Q86VQ3 553 aa25.56■■□□□ 1.68
HMG20A-210ENST00000560498 ITGAEP38570 1179 aa25.55■■□□□ 1.68
HMG20A-210ENST00000560498 ALKQ9UM73 1620 aa25.54■■□□□ 1.68
HMG20A-210ENST00000560498 ARHGAP23Q9P227 1491 aa25.53■■□□□ 1.68
HMG20A-210ENST00000560498 IQGAP1P46940 1657 aa25.53■■□□□ 1.68
HMG20A-210ENST00000560498 STAG3Q9UJ98 1225 aa25.53■■□□□ 1.68
HMG20A-210ENST00000560498 NOS1P29475 1434 aa25.53■■□□□ 1.68
HMG20A-210ENST00000560498 PIK3C2BO00750 1634 aa25.52■■□□□ 1.68
HMG20A-210ENST00000560498 SCAF11Q99590 1463 aaKnown RBP25.52■■□□□ 1.68
HMG20A-210ENST00000560498 SLIT1O75093 1534 aa25.52■■□□□ 1.68
HMG20A-210ENST00000560498 EFCAB6Q5THR3 1501 aa25.52■■□□□ 1.68
HMG20A-210ENST00000560498 SYNMO15061 1565 aa25.5■■□□□ 1.67
HMG20A-210ENST00000560498 ROCK1Q13464 1354 aa25.5■■□□□ 1.67
HMG20A-210ENST00000560498 TMEM2Q9UHN6 1383 aa25.49■■□□□ 1.67
HMG20A-210ENST00000560498 EID1Q9Y6B2 187 aa25.48■■□□□ 1.67
HMG20A-210ENST00000560498 SLC52A1Q9NWF4 448 aa25.45■■□□□ 1.66
HMG20A-210ENST00000560498 RGS17Q9UGC6 210 aaPredicted RBP25.44■■□□□ 1.66
HMG20A-210ENST00000560498 STRCP1A6NGW2 1772 aa25.43■■□□□ 1.66
HMG20A-210ENST00000560498 RPRD2Q5VT52 1461 aaKnown RBP25.42■■□□□ 1.66
HMG20A-210ENST00000560498 UNC13BO14795 1591 aa25.42■■□□□ 1.66
HMG20A-210ENST00000560498 TET3O43151 1660 aa25.4■■□□□ 1.66
HMG20A-210ENST00000560498 LRRC7Q96NW7 1537 aa25.4■■□□□ 1.66
HMG20A-210ENST00000560498 KDM5AP29375 1690 aaKnown RBP25.38■■□□□ 1.65
HMG20A-210ENST00000560498 ADGRB3O60242 1522 aa25.37■■□□□ 1.65
HMG20A-210ENST00000560498 NUP155O75694 1391 aa25.37■■□□□ 1.65
HMG20A-210ENST00000560498 SLC26A8Q96RN1 970 aa25.35■■□□□ 1.65
HMG20A-210ENST00000560498 RRBP1Q9P2E9 1410 aaKnown RBP25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms