RNA–Protein interactions for RNA: ENST00000560475.1

TRIP4-209, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-209ENST00000560475 RBM33Q96EV2 1170 aaKnown RBP11.77□□□□□ -0.53
TRIP4-209ENST00000560475 TSHZ2Q9NRE2 1034 aa11.77□□□□□ -0.53
TRIP4-209ENST00000560475 HCSTQ9UBK5 93 aa11.77□□□□□ -0.53
TRIP4-209ENST00000560475 EPAS1Q99814 870 aa11.76□□□□□ -0.53
TRIP4-209ENST00000560475 PPP1R3GB7ZBB8 358 aa11.75□□□□□ -0.53
TRIP4-209ENST00000560475 PDIA6Q15084 440 aa11.75□□□□□ -0.53
TRIP4-209ENST00000560475 PROX2Q3B8N5 592 aa11.74□□□□□ -0.53
TRIP4-209ENST00000560475 C6orf132Q5T0Z8 1188 aa11.74□□□□□ -0.53
TRIP4-209ENST00000560475 SPDYE16A6NNV3 312 aaPredicted RBP11.72□□□□□ -0.53
TRIP4-209ENST00000560475 MRPL50Q8N5N7 158 aaKnown RBP11.72□□□□□ -0.53
TRIP4-209ENST00000560475 NBR1Q14596 966 aa11.71□□□□□ -0.53
TRIP4-209ENST00000560475 GOLGA8CPA6NN73 597 aa11.7□□□□□ -0.54
TRIP4-209ENST00000560475 NBPF3Q9H094 633 aa11.69□□□□□ -0.54
TRIP4-209ENST00000560475 ARIH1Q9Y4X5 557 aaPredicted RBP11.69□□□□□ -0.54
TRIP4-209ENST00000560475 GRXCR2A6NFK2 248 aa11.68□□□□□ -0.54
TRIP4-209ENST00000560475 PTPN5P54829 565 aa11.68□□□□□ -0.54
TRIP4-209ENST00000560475 RABGEF1Q9UJ41 708 aa11.68□□□□□ -0.54
TRIP4-209ENST00000560475 MAP3K7O43318 606 aa11.67□□□□□ -0.54
TRIP4-209ENST00000560475 WNT2BQ93097 391 aa11.67□□□□□ -0.54
TRIP4-209ENST00000560475 EN1Q05925 392 aaPredicted RBP11.66□□□□□ -0.54
TRIP4-209ENST00000560475 TSR1Q2NL82 804 aaKnown RBP11.66□□□□□ -0.54
TRIP4-209ENST00000560475 KIAA1468Q9P260 1216 aa11.66□□□□□ -0.54
TRIP4-209ENST00000560475 PLA2G2EQ9NZK7 142 aa11.64□□□□□ -0.55
TRIP4-209ENST00000560475 PRIM1P49642 420 aaKnown RBP11.63□□□□□ -0.55
TRIP4-209ENST00000560475 THSD4Q6ZMP0 1018 aa11.63□□□□□ -0.55
TRIP4-209ENST00000560475 TRIM6-TRIM34B2RNG4 842 aa11.61□□□□□ -0.55
TRIP4-209ENST00000560475 ONECUT3O60422 494 aaPredicted RBP11.6□□□□□ -0.55
TRIP4-209ENST00000560475 SEPT9Q9UHD8 586 aaPredicted RBP11.59□□□□□ -0.55
TRIP4-209ENST00000560475 OSBPP22059 807 aa11.58□□□□□ -0.56
TRIP4-209ENST00000560475 LAPTM4BQ86VI4 370 aa11.56□□□□□ -0.56
TRIP4-209ENST00000560475 ANKK1Q8NFD2 765 aa11.56□□□□□ -0.56
TRIP4-209ENST00000560475 KCNV2Q8TDN2 545 aa11.56□□□□□ -0.56
TRIP4-209ENST00000560475 TSKSQ9UJT2 592 aa11.56□□□□□ -0.56
TRIP4-209ENST00000560475 ARHGEF1Q92888 912 aaKnown RBP11.55□□□□□ -0.56
TRIP4-209ENST00000560475 ZFRQ96KR1 1074 aaKnown RBP11.55□□□□□ -0.56
TRIP4-209ENST00000560475 BCAMP50895 628 aa11.54□□□□□ -0.56
TRIP4-209ENST00000560475 PLCB2Q00722 1185 aa11.53□□□□□ -0.56
TRIP4-209ENST00000560475 PACS2Q86VP3 889 aa11.53□□□□□ -0.56
TRIP4-209ENST00000560475 CDCA7LQ96GN5 454 aa11.53□□□□□ -0.56
TRIP4-209ENST00000560475 CDHR5Q9HBB8 845 aa11.53□□□□□ -0.56
TRIP4-209ENST00000560475 MLLT3P42568 568 aaPredicted RBP11.51□□□□□ -0.57
TRIP4-209ENST00000560475 PRSS12P56730 875 aa11.51□□□□□ -0.57
TRIP4-209ENST00000560475 FAM98CQ17RN3 349 aaKnown RBP11.51□□□□□ -0.57
TRIP4-209ENST00000560475 FAM198AQ9UFP1 575 aa11.51□□□□□ -0.57
TRIP4-209ENST00000560475 SOWAHBA6NEL2 793 aa11.5□□□□□ -0.57
TRIP4-209ENST00000560475 SMAPO00193 183 aa11.5□□□□□ -0.57
TRIP4-209ENST00000560475 CERKQ8TCT0 537 aa11.5□□□□□ -0.57
TRIP4-209ENST00000560475 C3orf80F5H4A9 247 aa11.47□□□□□ -0.57
TRIP4-209ENST00000560475 WBP1LQ9NX94 342 aa11.46□□□□□ -0.57
TRIP4-209ENST00000560475 NPDC1Q9NQX5 325 aaPredicted RBP11.45□□□□□ -0.58
TRIP4-209ENST00000560475 TATDN2Q93075 761 aa11.44□□□□□ -0.58
TRIP4-209ENST00000560475 LRCH3Q96II8 777 aa11.44□□□□□ -0.58
TRIP4-209ENST00000560475 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.44□□□□□ -0.58
TRIP4-209ENST00000560475 PNMA3Q9UL41 463 aa11.44□□□□□ -0.58
TRIP4-209ENST00000560475 HPS5Q9UPZ3 1129 aa11.42□□□□□ -0.58
TRIP4-209ENST00000560475 NUDT18Q6ZVK8 323 aa11.41□□□□□ -0.58
TRIP4-209ENST00000560475 P3H3Q8IVL6 736 aa11.41□□□□□ -0.58
TRIP4-209ENST00000560475 NBPF26B4DH59 902 aa11.4□□□□□ -0.58
TRIP4-209ENST00000560475 PADI6Q6TGC4 694 aa11.4□□□□□ -0.58
TRIP4-209ENST00000560475 SAMD7Q7Z3H4 446 aa11.4□□□□□ -0.58
TRIP4-209ENST00000560475 TSR3Q9UJK0 312 aaKnown RBP11.4□□□□□ -0.58
TRIP4-209ENST00000560475 SEMA3EO15041 775 aa11.39□□□□□ -0.59
TRIP4-209ENST00000560475 HAP1P54257 671 aaPredicted RBP11.39□□□□□ -0.59
TRIP4-209ENST00000560475 RBM27Q9P2N5 1060 aaKnown RBP11.38□□□□□ -0.59
TRIP4-209ENST00000560475 IFFO2Q5TF58 517 aa11.37□□□□□ -0.59
TRIP4-209ENST00000560475 TTC13Q8NBP0 860 aa11.37□□□□□ -0.59
TRIP4-209ENST00000560475 PPP4CP60510 307 aa11.36□□□□□ -0.59
TRIP4-209ENST00000560475 NYAP1Q6ZVC0 841 aa11.36□□□□□ -0.59
TRIP4-209ENST00000560475 NUTM2FA1L443 756 aa11.34□□□□□ -0.59
TRIP4-209ENST00000560475 ITGBL1O95965 494 aaPredicted RBP11.32□□□□□ -0.6
TRIP4-209ENST00000560475 PTGDRQ13258 359 aa11.32□□□□□ -0.6
TRIP4-209ENST00000560475 RNF40O75150 1001 aa11.31□□□□□ -0.6
TRIP4-209ENST00000560475 HDGFP51858 240 aaKnown RBP11.31□□□□□ -0.6
TRIP4-209ENST00000560475 A0A0G2JS52 829 aa11.3□□□□□ -0.6
TRIP4-209ENST00000560475 KDM2AQ9Y2K7 1162 aa11.3□□□□□ -0.6
TRIP4-209ENST00000560475 EYA1Q99502 592 aa11.29□□□□□ -0.6
TRIP4-209ENST00000560475 KCNC4Q03721 635 aa11.28□□□□□ -0.6
TRIP4-209ENST00000560475 SWT1Q5T5J6 900 aaKnown RBP11.28□□□□□ -0.6
TRIP4-209ENST00000560475 TESPA1A2RU30 521 aaPredicted RBP11.25□□□□□ -0.61
TRIP4-209ENST00000560475 FAM161AQ3B820 660 aa11.25□□□□□ -0.61
TRIP4-209ENST00000560475 RBM26Q5T8P6 1007 aaKnown RBP11.25□□□□□ -0.61
TRIP4-209ENST00000560475 FCHSD2O94868 740 aa11.23□□□□□ -0.61
TRIP4-209ENST00000560475 ADGRG1Q9Y653 693 aa11.22□□□□□ -0.61
TRIP4-209ENST00000560475 APLP1P51693 650 aa11.21□□□□□ -0.61
TRIP4-209ENST00000560475 TJAP1Q5JTD0 557 aa11.21□□□□□ -0.61
TRIP4-209ENST00000560475 SLF2Q8IX21 1173 aa11.21□□□□□ -0.61
TRIP4-209ENST00000560475 RGS20O76081 388 aa11.2□□□□□ -0.62
TRIP4-209ENST00000560475 SMYD5Q6GMV2 418 aa11.2□□□□□ -0.62
TRIP4-209ENST00000560475 RBM46Q8TBY0 533 aaKnown RBP11.2□□□□□ -0.62
TRIP4-209ENST00000560475 MTRQ99707 1265 aa11.2□□□□□ -0.62
TRIP4-209ENST00000560475 DNAJB2P25686 324 aa11.18□□□□□ -0.62
TRIP4-209ENST00000560475 RCCD1A6NED2 376 aa11.17□□□□□ -0.62
TRIP4-209ENST00000560475 SLC4A3P48751 1232 aa11.17□□□□□ -0.62
TRIP4-209ENST00000560475 ZNF516Q92618 1163 aa11.16□□□□□ -0.62
TRIP4-209ENST00000560475 IL21Q9HBE4 155 aa11.16□□□□□ -0.62
TRIP4-209ENST00000560475 HIC1Q14526 733 aa11.15□□□□□ -0.62
TRIP4-209ENST00000560475 TMEM134Q9H6X4 195 aa11.15□□□□□ -0.62
TRIP4-209ENST00000560475 VSIG10Q8N0Z9 540 aa11.14□□□□□ -0.63
TRIP4-209ENST00000560475 NECTIN2Q92692 538 aa11.14□□□□□ -0.63
TRIP4-209ENST00000560475 FECHP22830 423 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms