RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 A2MP01023 1474 aa12.62□□□□□ -0.39
TRAF3-209ENST00000560463 MYT1LQ9UL68 1186 aa12.62□□□□□ -0.39
TRAF3-209ENST00000560463 TET3O43151 1660 aa12.61□□□□□ -0.39
TRAF3-209ENST00000560463 MPHOSPH9Q99550 1183 aa12.61□□□□□ -0.39
TRAF3-209ENST00000560463 CEP152O94986 1710 aa12.61□□□□□ -0.39
TRAF3-209ENST00000560463 PRDM15P57071 1507 aaPredicted RBP12.61□□□□□ -0.39
TRAF3-209ENST00000560463 FAM135AQ9P2D6 1515 aa12.61□□□□□ -0.39
TRAF3-209ENST00000560463 RAPGEF3O95398 923 aa12.6□□□□□ -0.39
TRAF3-209ENST00000560463 ZC3H13Q5T200 1668 aaKnown RBP12.6□□□□□ -0.39
TRAF3-209ENST00000560463 CFAP65Q6ZU64 1925 aaKnown RBP12.6□□□□□ -0.39
TRAF3-209ENST00000560463 MROH1Q8NDA8 1641 aa12.59□□□□□ -0.39
TRAF3-209ENST00000560463 NUP155O75694 1391 aa12.59□□□□□ -0.39
TRAF3-209ENST00000560463 VWDEQ8N2E2 1590 aa12.59□□□□□ -0.39
TRAF3-209ENST00000560463 ARHGEF40Q8TER5 1519 aa12.58□□□□□ -0.4
TRAF3-209ENST00000560463 E9PCH4 1651 aa12.58□□□□□ -0.4
TRAF3-209ENST00000560463 SPHKAPQ2M3C7 1700 aa12.58□□□□□ -0.4
TRAF3-209ENST00000560463 SLC4A1APQ9BWU0 796 aaKnown RBP12.58□□□□□ -0.4
TRAF3-209ENST00000560463 TRHP20396 242 aaPredicted RBP12.57□□□□□ -0.4
TRAF3-209ENST00000560463 TIMELESSQ9UNS1 1208 aa12.56□□□□□ -0.4
TRAF3-209ENST00000560463 ATP10AO60312 1499 aa12.56□□□□□ -0.4
TRAF3-209ENST00000560463 KANK1Q14678 1352 aa12.56□□□□□ -0.4
TRAF3-209ENST00000560463 COL17A1Q9UMD9 1497 aaPredicted RBP12.55□□□□□ -0.4
TRAF3-209ENST00000560463 AGLP35573 1532 aa12.54□□□□□ -0.4
TRAF3-209ENST00000560463 YEATS2Q9ULM3 1422 aa12.54□□□□□ -0.4
TRAF3-209ENST00000560463 KIF1BO60333 1816 aa12.53□□□□□ -0.4
TRAF3-209ENST00000560463 LMTK2Q8IWU2 1503 aa12.53□□□□□ -0.4
TRAF3-209ENST00000560463 CAMSAP1Q5T5Y3 1602 aa12.53□□□□□ -0.4
TRAF3-209ENST00000560463 KIF3BO15066 747 aa12.53□□□□□ -0.4
TRAF3-209ENST00000560463 ANKRD30BQ9BXX2 1392 aa12.53□□□□□ -0.4
TRAF3-209ENST00000560463 SIGLEC1Q9BZZ2 1709 aa12.52□□□□□ -0.41
TRAF3-209ENST00000560463 PKD2Q13563 968 aa12.51□□□□□ -0.41
TRAF3-209ENST00000560463 EFCAB6Q5THR3 1501 aa12.51□□□□□ -0.41
TRAF3-209ENST00000560463 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.5□□□□□ -0.41
TRAF3-209ENST00000560463 RPRD2Q5VT52 1461 aaKnown RBP12.5□□□□□ -0.41
TRAF3-209ENST00000560463 SIN3AQ96ST3 1273 aa12.48□□□□□ -0.41
TRAF3-209ENST00000560463 CLTCQ00610 1675 aaKnown RBP12.48□□□□□ -0.41
TRAF3-209ENST00000560463 ABCC3O15438 1527 aa12.47□□□□□ -0.41
TRAF3-209ENST00000560463 TRPM2O94759 1503 aa12.47□□□□□ -0.41
TRAF3-209ENST00000560463 TONSLQ96HA7 1378 aa12.46□□□□□ -0.41
TRAF3-209ENST00000560463 MROH2AA6NES4 1674 aa12.46□□□□□ -0.41
TRAF3-209ENST00000560463 NEUROD1Q13562 356 aa12.46□□□□□ -0.41
TRAF3-209ENST00000560463 FOXD1Q16676 465 aa12.46□□□□□ -0.41
TRAF3-209ENST00000560463 PPP6R1Q9UPN7 881 aa12.46□□□□□ -0.41
TRAF3-209ENST00000560463 PREX1Q8TCU6 1659 aa12.45□□□□□ -0.42
TRAF3-209ENST00000560463 NEURL4Q96JN8 1562 aa12.44□□□□□ -0.42
TRAF3-209ENST00000560463 PTPRTO14522 1441 aa12.44□□□□□ -0.42
TRAF3-209ENST00000560463 FER1L4A9Z1Z3 1794 aa12.43□□□□□ -0.42
TRAF3-209ENST00000560463 GGT6Q6P531 493 aa12.43□□□□□ -0.42
TRAF3-209ENST00000560463 CLTCL1P53675 1640 aa12.43□□□□□ -0.42
TRAF3-209ENST00000560463 CCDC144AA2RUR9 1427 aa12.43□□□□□ -0.42
TRAF3-209ENST00000560463 ARHGAP31Q2M1Z3 1444 aa12.43□□□□□ -0.42
TRAF3-209ENST00000560463 WASHC2CQ9Y4E1 1318 aa12.42□□□□□ -0.42
TRAF3-209ENST00000560463 PLA2R1Q13018 1463 aa12.41□□□□□ -0.42
TRAF3-209ENST00000560463 IFT172Q9UG01 1749 aa12.41□□□□□ -0.42
TRAF3-209ENST00000560463 MYO5BQ9ULV0 1848 aa12.41□□□□□ -0.42
TRAF3-209ENST00000560463 PIK3C2BO00750 1634 aa12.4□□□□□ -0.42
TRAF3-209ENST00000560463 PPP1R15AO75807 674 aaPredicted RBP12.39□□□□□ -0.43
TRAF3-209ENST00000560463 NPATQ14207 1427 aa12.38□□□□□ -0.43
TRAF3-209ENST00000560463 CNTLNQ9NXG0 1405 aa12.38□□□□□ -0.43
TRAF3-209ENST00000560463 PPLO60437 1756 aa12.37□□□□□ -0.43
TRAF3-209ENST00000560463 SYNMO15061 1565 aa12.36□□□□□ -0.43
TRAF3-209ENST00000560463 NOS1P29475 1434 aa12.36□□□□□ -0.43
TRAF3-209ENST00000560463 C3P01024 1663 aa12.35□□□□□ -0.43
TRAF3-209ENST00000560463 L3MBTL2Q969R5 705 aa12.35□□□□□ -0.43
TRAF3-209ENST00000560463 KDM5AP29375 1690 aaKnown RBP12.35□□□□□ -0.43
TRAF3-209ENST00000560463 PHF23Q9BUL5 403 aaPredicted RBP12.34□□□□□ -0.43
TRAF3-209ENST00000560463 SPATA31D1Q6ZQQ2 1576 aa12.34□□□□□ -0.43
TRAF3-209ENST00000560463 POLR1AO95602 1720 aaPredicted RBP12.34□□□□□ -0.43
TRAF3-209ENST00000560463 KIAA1210Q9ULL0 1709 aa12.34□□□□□ -0.43
TRAF3-209ENST00000560463 SETD1BQ9UPS6 1966 aaKnown RBP12.33□□□□□ -0.44
TRAF3-209ENST00000560463 ESF1Q9H501 851 aaKnown RBP12.33□□□□□ -0.44
TRAF3-209ENST00000560463 SPATA31E1Q6ZUB1 1445 aa12.33□□□□□ -0.44
TRAF3-209ENST00000560463 ARID4BQ4LE39 1312 aaPredicted RBP12.33□□□□□ -0.44
TRAF3-209ENST00000560463 TRPM1Q7Z4N2 1603 aa12.33□□□□□ -0.44
TRAF3-209ENST00000560463 UGGT1Q9NYU2 1555 aa12.32□□□□□ -0.44
TRAF3-209ENST00000560463 STAC3Q96MF2 364 aa12.32□□□□□ -0.44
TRAF3-209ENST00000560463 ADGRB3O60242 1522 aa12.32□□□□□ -0.44
TRAF3-209ENST00000560463 UHRF1BP1Q6BDS2 1440 aa12.31□□□□□ -0.44
TRAF3-209ENST00000560463 ERVK-7P63135 1459 aa12.31□□□□□ -0.44
TRAF3-209ENST00000560463 ADAMTSL3P82987 1691 aa12.31□□□□□ -0.44
TRAF3-209ENST00000560463 TMEM131LA2VDJ0 1609 aa12.3□□□□□ -0.44
TRAF3-209ENST00000560463 RIMS1Q86UR5 1692 aaKnown RBP12.3□□□□□ -0.44
TRAF3-209ENST00000560463 LAMC1P11047 1609 aa12.29□□□□□ -0.44
TRAF3-209ENST00000560463 MLECQ14165 292 aa12.29□□□□□ -0.44
TRAF3-209ENST00000560463 SLC52A1Q9NWF4 448 aa12.29□□□□□ -0.44
TRAF3-209ENST00000560463 MADDQ8WXG6 1647 aa12.29□□□□□ -0.44
TRAF3-209ENST00000560463 DCAF11Q8TEB1 546 aa12.27□□□□□ -0.45
TRAF3-209ENST00000560463 ZMYM3Q14202 1370 aa12.27□□□□□ -0.45
TRAF3-209ENST00000560463 UBR1Q8IWV7 1749 aa12.26□□□□□ -0.45
TRAF3-209ENST00000560463 MYOM2P54296 1465 aa12.26□□□□□ -0.45
TRAF3-209ENST00000560463 RALGAPBQ86X10 1494 aa12.26□□□□□ -0.45
TRAF3-209ENST00000560463 ZNF316A6NFI3 1004 aaPredicted RBP12.25□□□□□ -0.45
TRAF3-209ENST00000560463 RGL3Q3MIN7 710 aa12.25□□□□□ -0.45
TRAF3-209ENST00000560463 PRAG1Q86YV5 1406 aa12.25□□□□□ -0.45
TRAF3-209ENST00000560463 RPGRIP1LQ68CZ1 1315 aa12.24□□□□□ -0.45
TRAF3-209ENST00000560463 NEXMIFQ5QGS0 1516 aa12.23□□□□□ -0.45
TRAF3-209ENST00000560463 NBPF8Q3BBV2 869 aa12.23□□□□□ -0.45
TRAF3-209ENST00000560463 IQGAP1P46940 1657 aa12.22□□□□□ -0.45
TRAF3-209ENST00000560463 KDM2AQ9Y2K7 1162 aa12.22□□□□□ -0.45
TRAF3-209ENST00000560463 NRXN1Q9ULB1 1477 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms